RNA–Protein interactions for RNA: ENST00000474843.1

SRRM1-210, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-210ENST00000474843 VSIG10Q8N0Z9 540 aa12.03□□□□□ -0.48
SRRM1-210ENST00000474843 POTEGQ6S5H5 508 aa12.02□□□□□ -0.49
SRRM1-210ENST00000474843 L3MBTL3Q96JM7 780 aaPredicted RBP12.02□□□□□ -0.49
SRRM1-210ENST00000474843 FAM163AQ96GL9 167 aaPredicted RBP12.01□□□□□ -0.49
SRRM1-210ENST00000474843 PLSCR2Q9NRY7 297 aa11.98□□□□□ -0.49
SRRM1-210ENST00000474843 TMEM121BQ9BXQ6 578 aaPredicted RBP11.97□□□□□ -0.49
SRRM1-210ENST00000474843 NCKAP5LQ9HCH0 1330 aa11.96□□□□□ -0.49
SRRM1-210ENST00000474843 PCDH10Q9P2E7 1040 aa11.96□□□□□ -0.49
SRRM1-210ENST00000474843 C3orf67Q6ZVT6 689 aa11.94□□□□□ -0.5
SRRM1-210ENST00000474843 SLAIN1Q8ND83 568 aa11.93□□□□□ -0.5
SRRM1-210ENST00000474843 LARP6Q9BRS8 491 aaKnown RBP11.92□□□□□ -0.5
SRRM1-210ENST00000474843 CRISPLD2Q9H0B8 497 aa11.92□□□□□ -0.5
SRRM1-210ENST00000474843 TMEM92Q6UXU6 159 aa11.9□□□□□ -0.5
SRRM1-210ENST00000474843 PDE4AP27815 886 aa11.89□□□□□ -0.51
SRRM1-210ENST00000474843 TMC2Q8TDI7 906 aa11.89□□□□□ -0.51
SRRM1-210ENST00000474843 WDR70Q9NW82 654 aa11.89□□□□□ -0.51
SRRM1-210ENST00000474843 C2orf72A6NCS6 295 aa11.87□□□□□ -0.51
SRRM1-210ENST00000474843 DDX27Q96GQ7 796 aaKnown RBP11.86□□□□□ -0.51
SRRM1-210ENST00000474843 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.86□□□□□ -0.51
SRRM1-210ENST00000474843 GPHNQ9NQX3 736 aaPredicted RBP11.85□□□□□ -0.51
SRRM1-210ENST00000474843 DSG2Q14126 1118 aa11.83□□□□□ -0.52
SRRM1-210ENST00000474843 MFSD10Q14728 455 aa11.83□□□□□ -0.52
SRRM1-210ENST00000474843 PPP1R15BQ5SWA1 713 aa11.83□□□□□ -0.52
SRRM1-210ENST00000474843 LCE2DQ5TA82 110 aaPredicted RBP11.83□□□□□ -0.52
SRRM1-210ENST00000474843 KIF3CO14782 793 aa11.82□□□□□ -0.52
SRRM1-210ENST00000474843 SNPHO15079 494 aa11.81□□□□□ -0.52
SRRM1-210ENST00000474843 KCNV2Q8TDN2 545 aa11.79□□□□□ -0.52
SRRM1-210ENST00000474843 FOXK1P85037 733 aa11.77□□□□□ -0.53
SRRM1-210ENST00000474843 PLPP6Q8IY26 295 aa11.77□□□□□ -0.53
SRRM1-210ENST00000474843 NISCHQ9Y2I1 1504 aa11.76□□□□□ -0.53
SRRM1-210ENST00000474843 E2F4Q16254 413 aa11.76□□□□□ -0.53
SRRM1-210ENST00000474843 ST18O60284 1047 aa11.74□□□□□ -0.53
SRRM1-210ENST00000474843 P3H3Q8IVL6 736 aa11.73□□□□□ -0.53
SRRM1-210ENST00000474843 CAMK2BQ13554 666 aa11.69□□□□□ -0.54
SRRM1-210ENST00000474843 EMILIN3Q9NT22 766 aa11.69□□□□□ -0.54
SRRM1-210ENST00000474843 UPF1Q92900 1129 aaKnown RBP eCLIP11.68□□□□□ -0.54
SRRM1-210ENST00000474843 CDAN1Q8IWY9 1227 aa11.67□□□□□ -0.54
SRRM1-210ENST00000474843 DPYSL4O14531 572 aa11.65□□□□□ -0.54
SRRM1-210ENST00000474843 NBR1Q14596 966 aa11.63□□□□□ -0.55
SRRM1-210ENST00000474843 ARHGEF1Q92888 912 aaKnown RBP11.62□□□□□ -0.55
SRRM1-210ENST00000474843 BCANQ96GW7 911 aa11.61□□□□□ -0.55
SRRM1-210ENST00000474843 HOXB3P14651 431 aaPredicted RBP11.59□□□□□ -0.55
SRRM1-210ENST00000474843 OXER1Q8TDS5 423 aa11.59□□□□□ -0.55
SRRM1-210ENST00000474843 MAP3K9P80192 1104 aa11.57□□□□□ -0.56
SRRM1-210ENST00000474843 DOK7Q18PE1 504 aa11.56□□□□□ -0.56
SRRM1-210ENST00000474843 ARIH1Q9Y4X5 557 aaPredicted RBP11.56□□□□□ -0.56
SRRM1-210ENST00000474843 SLC34A2O95436 690 aa11.55□□□□□ -0.56
SRRM1-210ENST00000474843 PTCD2Q8WV60 388 aaKnown RBP11.55□□□□□ -0.56
SRRM1-210ENST00000474843 SEMA3EO15041 775 aa11.54□□□□□ -0.56
SRRM1-210ENST00000474843 MARVELD3Q96A59 401 aa11.54□□□□□ -0.56
SRRM1-210ENST00000474843 PCDHGA4Q9Y5G9 962 aa11.54□□□□□ -0.56
SRRM1-210ENST00000474843 ZNF710Q8N1W2 664 aa11.53□□□□□ -0.56
SRRM1-210ENST00000474843 PDIA6Q15084 440 aa11.52□□□□□ -0.57
SRRM1-210ENST00000474843 KHSRPQ92945 711 aaKnown RBP eCLIP11.52□□□□□ -0.57
SRRM1-210ENST00000474843 TBC1D12O60347 775 aa11.51□□□□□ -0.57
SRRM1-210ENST00000474843 EMP3P54852 163 aa11.51□□□□□ -0.57
SRRM1-210ENST00000474843 RIMBP2O15034 1052 aa11.5□□□□□ -0.57
SRRM1-210ENST00000474843 EVI5O60447 810 aa11.5□□□□□ -0.57
SRRM1-210ENST00000474843 ARSIQ5FYB1 569 aa11.5□□□□□ -0.57
SRRM1-210ENST00000474843 NUDT7P0C024 238 aa11.48□□□□□ -0.57
SRRM1-210ENST00000474843 SPDYE16A6NNV3 312 aaPredicted RBP11.47□□□□□ -0.57
SRRM1-210ENST00000474843 MLLT3P42568 568 aaPredicted RBP11.47□□□□□ -0.57
SRRM1-210ENST00000474843 ZNF316A6NFI3 1004 aaPredicted RBP11.46□□□□□ -0.57
SRRM1-210ENST00000474843 GPR153Q6NV75 609 aa11.45□□□□□ -0.58
SRRM1-210ENST00000474843 TESPA1A2RU30 521 aaPredicted RBP11.44□□□□□ -0.58
SRRM1-210ENST00000474843 ZSWIM6Q9HCJ5 1215 aa11.44□□□□□ -0.58
SRRM1-210ENST00000474843 GRXCR2A6NFK2 248 aa11.43□□□□□ -0.58
SRRM1-210ENST00000474843 DDX12PQ92771 950 aa11.43□□□□□ -0.58
SRRM1-210ENST00000474843 FAM205CA6NFA0 338 aa11.42□□□□□ -0.58
SRRM1-210ENST00000474843 HS3ST6Q96QI5 342 aa11.4□□□□□ -0.58
SRRM1-210ENST00000474843 KDM4FA0A1W2PPD8 638 aa11.39□□□□□ -0.59
SRRM1-210ENST00000474843 HOXB1P14653 301 aaPredicted RBP11.39□□□□□ -0.59
SRRM1-210ENST00000474843 SPNS2Q8IVW8 549 aa11.37□□□□□ -0.59
SRRM1-210ENST00000474843 ANO8Q9HCE9 1232 aaPredicted RBP11.37□□□□□ -0.59
SRRM1-210ENST00000474843 TULP1O00294 542 aaPredicted RBP11.36□□□□□ -0.59
SRRM1-210ENST00000474843 LHX6Q9UPM6 363 aa11.36□□□□□ -0.59
SRRM1-210ENST00000474843 LMOD2Q6P5Q4 547 aa11.35□□□□□ -0.59
SRRM1-210ENST00000474843 PTGER2P43116 358 aa11.34□□□□□ -0.59
SRRM1-210ENST00000474843 RBM26Q5T8P6 1007 aaKnown RBP11.34□□□□□ -0.59
SRRM1-210ENST00000474843 SMYD5Q6GMV2 418 aa11.34□□□□□ -0.59
SRRM1-210ENST00000474843 MMRN1Q13201 1228 aa11.33□□□□□ -0.6
SRRM1-210ENST00000474843 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.33□□□□□ -0.6
SRRM1-210ENST00000474843 ZNF454Q8N9F8 522 aa11.33□□□□□ -0.6
SRRM1-210ENST00000474843 ERBB3P21860 1342 aa11.33□□□□□ -0.6
SRRM1-210ENST00000474843 PRIM1P49642 420 aaKnown RBP11.32□□□□□ -0.6
SRRM1-210ENST00000474843 PCDHGA10Q9Y5H3 936 aa11.32□□□□□ -0.6
SRRM1-210ENST00000474843 PHF14O94880 888 aa11.31□□□□□ -0.6
SRRM1-210ENST00000474843 JPH4Q96JJ6 628 aa11.31□□□□□ -0.6
SRRM1-210ENST00000474843 OSBPP22059 807 aa11.3□□□□□ -0.6
SRRM1-210ENST00000474843 FOSBP53539 338 aa11.3□□□□□ -0.6
SRRM1-210ENST00000474843 RBM33Q96EV2 1170 aaKnown RBP11.3□□□□□ -0.6
SRRM1-210ENST00000474843 POTEB3A0JP26 581 aa11.29□□□□□ -0.6
SRRM1-210ENST00000474843 POTEBQ6S5H4 581 aa11.29□□□□□ -0.6
SRRM1-210ENST00000474843 TYW1BQ6NUM6 668 aa11.27□□□□□ -0.61
SRRM1-210ENST00000474843 EPAS1Q99814 870 aa11.27□□□□□ -0.61
SRRM1-210ENST00000474843 MAP3K7O43318 606 aa11.26□□□□□ -0.61
SRRM1-210ENST00000474843 TPRNQ4KMQ1 711 aa11.26□□□□□ -0.61
SRRM1-210ENST00000474843 EN1Q05925 392 aaPredicted RBP11.25□□□□□ -0.61
SRRM1-210ENST00000474843 PPP4R3BQ5MIZ7 849 aa11.25□□□□□ -0.61
SRRM1-210ENST00000474843 VARS2Q5ST30 1063 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms