RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 CD109Q6YHK3 1445 aa30.74■■■□□ 2.51
SH3D21-202ENST00000474766 CDK11AQ9UQ88 783 aaPredicted RBP30.73■■■□□ 2.51
SH3D21-202ENST00000474766 TROQ12816 1431 aaPredicted RBP30.73■■■□□ 2.51
SH3D21-202ENST00000474766 PHLDB1Q86UU1 1377 aa30.72■■■□□ 2.51
SH3D21-202ENST00000474766 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.72■■■□□ 2.516e-7■■■□□ 17.4
SH3D21-202ENST00000474766 KIF14Q15058 1648 aa30.72■■■□□ 2.51
SH3D21-202ENST00000474766 TTC37Q6PGP7 1564 aa30.71■■■□□ 2.51
SH3D21-202ENST00000474766 TEX14Q8IWB6 1497 aa30.64■■■□□ 2.5
SH3D21-202ENST00000474766 RAB3GAP2Q9H2M9 1393 aa30.6■■■□□ 2.49
SH3D21-202ENST00000474766 ITGAEP38570 1179 aa30.6■■■□□ 2.49
SH3D21-202ENST00000474766 MTUS2Q5JR59 1369 aa30.57■■■□□ 2.48
SH3D21-202ENST00000474766 KDM6BO15054 1643 aa30.56■■■□□ 2.48
SH3D21-202ENST00000474766 SETD5Q9C0A6 1442 aa30.56■■■□□ 2.48
SH3D21-202ENST00000474766 MYO5CQ9NQX4 1742 aa30.55■■■□□ 2.48
SH3D21-202ENST00000474766 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.55■■■□□ 2.481e-8■■■□□ 17.6
SH3D21-202ENST00000474766 EHBP1L1Q8N3D4 1523 aa30.54■■■□□ 2.48
SH3D21-202ENST00000474766 COL17A1Q9UMD9 1497 aaPredicted RBP30.52■■■□□ 2.48
SH3D21-202ENST00000474766 PLCH2O75038 1416 aa30.49■■■□□ 2.47
SH3D21-202ENST00000474766 CDC42BPAQ5VT25 1732 aa30.47■■■□□ 2.47
SH3D21-202ENST00000474766 FAM50AQ14320 339 aaKnown RBP30.47■■■□□ 2.47
SH3D21-202ENST00000474766 FANCAO15360 1455 aa30.47■■■□□ 2.47
SH3D21-202ENST00000474766 NEO1Q92859 1461 aa30.47■■■□□ 2.47
SH3D21-202ENST00000474766 CDC42BPBQ9Y5S2 1711 aa30.46■■■□□ 2.47
SH3D21-202ENST00000474766 PREX2Q70Z35 1606 aa30.45■■■□□ 2.47
SH3D21-202ENST00000474766 ARAP3Q8WWN8 1544 aa30.45■■■□□ 2.46
SH3D21-202ENST00000474766 SUPT16HQ9Y5B9 1047 aaKnown RBP30.44■■■□□ 2.46
SH3D21-202ENST00000474766 CFAP74Q9C0B2 1584 aa30.43■■■□□ 2.46
SH3D21-202ENST00000474766 SUPT6HQ7KZ85 1726 aaKnown RBP30.41■■■□□ 2.46
SH3D21-202ENST00000474766 ARHGAP5Q13017 1502 aa30.4■■■□□ 2.46
SH3D21-202ENST00000474766 NCOA2Q15596 1464 aa30.4■■■□□ 2.46
SH3D21-202ENST00000474766 AKNAQ7Z591 1439 aa30.39■■■□□ 2.46
SH3D21-202ENST00000474766 FGD6Q6ZV73 1430 aa30.38■■■□□ 2.45
SH3D21-202ENST00000474766 GPATCH8Q9UKJ3 1502 aaKnown RBP30.37■■■□□ 2.45
SH3D21-202ENST00000474766 EFCAB2Q5VUJ9 269 aa30.33■■■□□ 2.45
SH3D21-202ENST00000474766 FRMPD1Q5SYB0 1578 aa30.32■■■□□ 2.44
SH3D21-202ENST00000474766 ADGRL1O94910 1474 aa30.3■■■□□ 2.44
SH3D21-202ENST00000474766 ITSN2Q9NZM3 1697 aa30.29■■■□□ 2.44
SH3D21-202ENST00000474766 RICTORQ6R327 1708 aa30.29■■■□□ 2.44
SH3D21-202ENST00000474766 RAPGEF3O95398 923 aa30.27■■■□□ 2.44
SH3D21-202ENST00000474766 SAMD9LQ8IVG5 1584 aa30.26■■■□□ 2.43
SH3D21-202ENST00000474766 DENND4BO75064 1496 aaPredicted RBP30.26■■■□□ 2.43
SH3D21-202ENST00000474766 SCAPERQ9BY12 1400 aa30.25■■■□□ 2.43
SH3D21-202ENST00000474766 ABCC1P33527 1531 aa30.24■■■□□ 2.43
SH3D21-202ENST00000474766 MYOM3Q5VTT5 1437 aa30.24■■■□□ 2.43
SH3D21-202ENST00000474766 CFDP1Q9UEE9 299 aaPredicted RBP30.22■■■□□ 2.43
SH3D21-202ENST00000474766 ARHGEF12Q9NZN5 1544 aa30.21■■■□□ 2.43
SH3D21-202ENST00000474766 TSHZ2Q9NRE2 1034 aa30.2■■■□□ 2.43
SH3D21-202ENST00000474766 POGZQ7Z3K3 1410 aa30.2■■■□□ 2.43
SH3D21-202ENST00000474766 ZNF777Q9ULD5 760 aaPredicted RBP30.19■■■□□ 2.42
SH3D21-202ENST00000474766 ANP32EQ9BTT0 268 aa30.18■■■□□ 2.42
SH3D21-202ENST00000474766 TIMELESSQ9UNS1 1208 aa30.17■■■□□ 2.42
SH3D21-202ENST00000474766 HFM1A2PYH4 1435 aa30.16■■■□□ 2.42
SH3D21-202ENST00000474766 PTPRKQ15262 1439 aa30.16■■■□□ 2.42
SH3D21-202ENST00000474766 SYCP2Q9BX26 1530 aa30.15■■■□□ 2.42
SH3D21-202ENST00000474766 ZMYM4Q5VZL5 1548 aa30.14■■■□□ 2.42
SH3D21-202ENST00000474766 ZNF644Q9H582 1327 aaPredicted RBP30.14■■■□□ 2.41
SH3D21-202ENST00000474766 TRAPPC8Q9Y2L5 1435 aa30.12■■■□□ 2.41
SH3D21-202ENST00000474766 ZNF518AQ6AHZ1 1483 aa30.11■■■□□ 2.41
SH3D21-202ENST00000474766 KDM5CP41229 1560 aa30.1■■■□□ 2.41
SH3D21-202ENST00000474766 SIN3AQ96ST3 1273 aa30.1■■■□□ 2.41
SH3D21-202ENST00000474766 MIA2Q96PC5 1412 aa30.1■■■□□ 2.41
SH3D21-202ENST00000474766 AFAP1Q8N556 730 aa30.09■■■□□ 2.41
SH3D21-202ENST00000474766 PLEKHH2Q8IVE3 1493 aa30.09■■■□□ 2.41
SH3D21-202ENST00000474766 PTPN23Q9H3S7 1636 aa30.09■■■□□ 2.41
SH3D21-202ENST00000474766 CAMSAP2Q08AD1 1489 aa30.08■■■□□ 2.41
SH3D21-202ENST00000474766 KIAA1107Q9UPP5 1409 aa30.08■■■□□ 2.41
SH3D21-202ENST00000474766 HNRNPMP52272 730 aaKnown RBP eCLIP30.06■■■□□ 2.4
SH3D21-202ENST00000474766 TCOF1Q13428 1488 aaKnown RBP30.05■■■□□ 2.4
SH3D21-202ENST00000474766 ARHGEF40Q8TER5 1519 aa30.05■■■□□ 2.4
SH3D21-202ENST00000474766 NAIPQ13075 1403 aa30.04■■■□□ 2.4
SH3D21-202ENST00000474766 YEATS2Q9ULM3 1422 aa30.03■■■□□ 2.4
SH3D21-202ENST00000474766 MBD5Q9P267 1494 aa30.03■■■□□ 2.4
SH3D21-202ENST00000474766 ZFYVE16Q7Z3T8 1539 aa30.02■■■□□ 2.4
SH3D21-202ENST00000474766 HECW2Q9P2P5 1572 aa30.02■■■□□ 2.4
SH3D21-202ENST00000474766 MAGI2Q86UL8 1455 aa30.01■■■□□ 2.39
SH3D21-202ENST00000474766 KIDINS220Q9ULH0 1771 aa29.96■■■□□ 2.39
SH3D21-202ENST00000474766 MLH3Q9UHC1 1453 aa29.96■■■□□ 2.39
SH3D21-202ENST00000474766 PPP1R15AO75807 674 aaPredicted RBP29.94■■■□□ 2.38
SH3D21-202ENST00000474766 ABCA6Q8N139 1617 aa29.93■■■□□ 2.38
SH3D21-202ENST00000474766 ARHGEF5Q12774 1597 aa29.93■■■□□ 2.38
SH3D21-202ENST00000474766 SIGLEC1Q9BZZ2 1709 aa29.93■■■□□ 2.38
SH3D21-202ENST00000474766 INO80Q9ULG1 1556 aaPredicted RBP29.92■■■□□ 2.38
SH3D21-202ENST00000474766 DIP2CQ9Y2E4 1556 aa29.92■■■□□ 2.38
SH3D21-202ENST00000474766 CCDC141Q6ZP82 1450 aa29.91■■■□□ 2.38
SH3D21-202ENST00000474766 ATP7AQ04656 1500 aa29.89■■■□□ 2.38
SH3D21-202ENST00000474766 SPAG9O60271 1321 aaKnown RBP29.89■■■□□ 2.38
SH3D21-202ENST00000474766 MYT1LQ9UL68 1186 aa29.88■■■□□ 2.37
SH3D21-202ENST00000474766 GCC2Q8IWJ2 1684 aa29.87■■■□□ 2.37
SH3D21-202ENST00000474766 ATP10AO60312 1499 aa29.86■■■□□ 2.37
SH3D21-202ENST00000474766 C9orf84Q5VXU9 1444 aa29.83■■■□□ 2.37
SH3D21-202ENST00000474766 DNMT1P26358 1616 aaKnown RBP29.81■■■□□ 2.36
SH3D21-202ENST00000474766 RSPH4AQ5TD94 716 aa29.81■■■□□ 2.36
SH3D21-202ENST00000474766 ABCC5O15440 1437 aa29.81■■■□□ 2.36
SH3D21-202ENST00000474766 CROCC2H7BZ55 1655 aa29.81■■■□□ 2.36
SH3D21-202ENST00000474766 TONSLQ96HA7 1378 aa29.8■■■□□ 2.36
SH3D21-202ENST00000474766 REREQ9P2R6 1566 aa29.79■■■□□ 2.36
SH3D21-202ENST00000474766 DAPK1P53355 1430 aa29.79■■■□□ 2.36
SH3D21-202ENST00000474766 RTEL1-TNFRSF6BF6WH68 1400 aa29.78■■■□□ 2.36
SH3D21-202ENST00000474766 MAST1Q9Y2H9 1570 aa29.77■■■□□ 2.36
SH3D21-202ENST00000474766 KDM4FA0A1W2PPD8 638 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms