RNA–Protein interactions for RNA: ENST00000474128.1

LAMA5-208, Transcript of laminin subunit alpha 5, humanhuman

TSL 3

Gene LAMA5, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-208ENST00000474128 EFCAB2Q5VUJ9 269 aa28.46■■■□□ 2.15
LAMA5-208ENST00000474128 RIMS1Q86UR5 1692 aaKnown RBP28.45■■■□□ 2.15
LAMA5-208ENST00000474128 PCF11O94913 1555 aaKnown RBP28.45■■■□□ 2.14
LAMA5-208ENST00000474128 TROQ12816 1431 aaPredicted RBP28.43■■■□□ 2.14
LAMA5-208ENST00000474128 MYO5CQ9NQX4 1742 aa28.43■■■□□ 2.14
LAMA5-208ENST00000474128 KIF14Q15058 1648 aa28.42■■■□□ 2.14
LAMA5-208ENST00000474128 LMTK3Q96Q04 1460 aa28.41■■■□□ 2.14
LAMA5-208ENST00000474128 CLIP1P30622 1438 aa28.41■■■□□ 2.14
LAMA5-208ENST00000474128 SIGLEC1Q9BZZ2 1709 aa28.39■■■□□ 2.14
LAMA5-208ENST00000474128 ATP10AO60312 1499 aa28.36■■■□□ 2.13
LAMA5-208ENST00000474128 MLECQ14165 292 aa28.35■■■□□ 2.13
LAMA5-208ENST00000474128 ARHGAP5Q13017 1502 aa28.34■■■□□ 2.13
LAMA5-208ENST00000474128 C9orf84Q5VXU9 1444 aa28.34■■■□□ 2.13
LAMA5-208ENST00000474128 ZNF518AQ6AHZ1 1483 aa28.34■■■□□ 2.13
LAMA5-208ENST00000474128 LRRIQ1Q96JM4 1722 aa28.32■■■□□ 2.12
LAMA5-208ENST00000474128 PLPPR3Q6T4P5 718 aa28.31■■■□□ 2.12
LAMA5-208ENST00000474128 CASKIN1Q8WXD9 1431 aa28.3■■■□□ 2.12
LAMA5-208ENST00000474128 CCDC18Q5T9S5 1454 aa28.29■■■□□ 2.12
LAMA5-208ENST00000474128 FBXO41Q8TF61 875 aa28.29■■■□□ 2.12
LAMA5-208ENST00000474128 FER1L4A9Z1Z3 1794 aa28.29■■■□□ 2.12
LAMA5-208ENST00000474128 KDM5CP41229 1560 aa28.28■■■□□ 2.12
LAMA5-208ENST00000474128 AFAP1Q8N556 730 aa28.27■■■□□ 2.12
LAMA5-208ENST00000474128 ARHGEF12Q9NZN5 1544 aa28.27■■■□□ 2.12
LAMA5-208ENST00000474128 HSPA2P54652 639 aa28.24■■■□□ 2.11
LAMA5-208ENST00000474128 CDC42BPBQ9Y5S2 1711 aa28.22■■■□□ 2.11
LAMA5-208ENST00000474128 MYT1LQ9UL68 1186 aa28.21■■■□□ 2.11
LAMA5-208ENST00000474128 PREX2Q70Z35 1606 aa28.19■■■□□ 2.1
LAMA5-208ENST00000474128 FYCO1Q9BQS8 1478 aa28.18■■■□□ 2.1
LAMA5-208ENST00000474128 MLH3Q9UHC1 1453 aa28.18■■■□□ 2.1
LAMA5-208ENST00000474128 DIP2CQ9Y2E4 1556 aa28.17■■■□□ 2.1
LAMA5-208ENST00000474128 ABCC1P33527 1531 aa28.16■■■□□ 2.1
LAMA5-208ENST00000474128 REREQ9P2R6 1566 aa28.16■■■□□ 2.1
LAMA5-208ENST00000474128 TRAPPC8Q9Y2L5 1435 aa28.14■■■□□ 2.1
LAMA5-208ENST00000474128 CEBPAP49715 358 aaPredicted RBP28.11■■■□□ 2.09
LAMA5-208ENST00000474128 ABCA6Q8N139 1617 aa28.1■■■□□ 2.09
LAMA5-208ENST00000474128 ITSN2Q9NZM3 1697 aa28.1■■■□□ 2.09
LAMA5-208ENST00000474128 PREX1Q8TCU6 1659 aa28.08■■■□□ 2.09
LAMA5-208ENST00000474128 CDC42BPAQ5VT25 1732 aa28.08■■■□□ 2.09
LAMA5-208ENST00000474128 AGLP35573 1532 aa28.08■■■□□ 2.08
LAMA5-208ENST00000474128 ZNF777Q9ULD5 760 aaPredicted RBP28.02■■■□□ 2.08
LAMA5-208ENST00000474128 GPATCH8Q9UKJ3 1502 aaKnown RBP28.02■■■□□ 2.08
LAMA5-208ENST00000474128 UHRF1BP1Q6BDS2 1440 aa28.01■■■□□ 2.08
LAMA5-208ENST00000474128 KIDINS220Q9ULH0 1771 aa28.01■■■□□ 2.08
LAMA5-208ENST00000474128 SETD1BQ9UPS6 1966 aaKnown RBP28.01■■■□□ 2.07
LAMA5-208ENST00000474128 ESF1Q9H501 851 aaKnown RBP28.01■■■□□ 2.07
LAMA5-208ENST00000474128 SAMD9LQ8IVG5 1584 aa27.99■■■□□ 2.07
LAMA5-208ENST00000474128 SYCP2Q9BX26 1530 aa27.97■■■□□ 2.07
LAMA5-208ENST00000474128 CERKQ8TCT0 537 aa27.96■■■□□ 2.07
LAMA5-208ENST00000474128 SPAG9O60271 1321 aaKnown RBP27.94■■■□□ 2.06
LAMA5-208ENST00000474128 C3P01024 1663 aa27.94■■■□□ 2.06
LAMA5-208ENST00000474128 CNTLNQ9NXG0 1405 aa27.94■■■□□ 2.06
LAMA5-208ENST00000474128 CFDP1Q9UEE9 299 aaPredicted RBP27.94■■■□□ 2.06
LAMA5-208ENST00000474128 DMRT2Q9Y5R5 561 aa27.94■■■□□ 2.06
LAMA5-208ENST00000474128 CCNB3Q8WWL7 1395 aa27.94■■■□□ 2.06
LAMA5-208ENST00000474128 KIAA1107Q9UPP5 1409 aa27.93■■■□□ 2.06
LAMA5-208ENST00000474128 HNRNPMP52272 730 aaKnown RBP eCLIP27.93■■■□□ 2.06
LAMA5-208ENST00000474128 PLEKHH2Q8IVE3 1493 aa27.93■■■□□ 2.06
LAMA5-208ENST00000474128 MTUS2Q5JR59 1369 aa27.92■■■□□ 2.06
LAMA5-208ENST00000474128 STRCQ7RTU9 1775 aa27.88■■■□□ 2.05
LAMA5-208ENST00000474128 ATP7AQ04656 1500 aa27.87■■■□□ 2.05
LAMA5-208ENST00000474128 INO80Q9ULG1 1556 aaPredicted RBP27.83■■■□□ 2.05
LAMA5-208ENST00000474128 NPATQ14207 1427 aa27.81■■■□□ 2.04
LAMA5-208ENST00000474128 A2MP01023 1474 aa27.81■■■□□ 2.04
LAMA5-208ENST00000474128 EHBP1L1Q8N3D4 1523 aa27.81■■■□□ 2.04
LAMA5-208ENST00000474128 MROH2AA6NES4 1674 aa27.81■■■□□ 2.04
LAMA5-208ENST00000474128 ZMYM3Q14202 1370 aa27.8■■■□□ 2.04
LAMA5-208ENST00000474128 PTPRTO14522 1441 aa27.8■■■□□ 2.04
LAMA5-208ENST00000474128 PLXNC1O60486 1568 aa27.8■■■□□ 2.04
LAMA5-208ENST00000474128 SUPT6HQ7KZ85 1726 aaKnown RBP27.8■■■□□ 2.04
LAMA5-208ENST00000474128 TIAM1Q13009 1591 aa27.78■■■□□ 2.04
LAMA5-208ENST00000474128 CEP162Q5TB80 1403 aa27.76■■■□□ 2.04
LAMA5-208ENST00000474128 ZNF644Q9H582 1327 aaPredicted RBP27.75■■■□□ 2.03
LAMA5-208ENST00000474128 NCOA1Q15788 1441 aa27.74■■■□□ 2.03
LAMA5-208ENST00000474128 MBD5Q9P267 1494 aa27.73■■■□□ 2.03
LAMA5-208ENST00000474128 GGT6Q6P531 493 aa27.71■■■□□ 2.03
LAMA5-208ENST00000474128 PPP6R1Q9UPN7 881 aa27.71■■■□□ 2.03
LAMA5-208ENST00000474128 ADGBQ8N7X0 1667 aa27.7■■■□□ 2.02
LAMA5-208ENST00000474128 CLTCQ00610 1675 aaKnown RBP27.69■■■□□ 2.02
LAMA5-208ENST00000474128 RTEL1-TNFRSF6BF6WH68 1400 aa27.69■■■□□ 2.02
LAMA5-208ENST00000474128 CAMSAP1Q5T5Y3 1602 aa27.67■■■□□ 2.02
LAMA5-208ENST00000474128 PTPRKQ15262 1439 aa27.66■■■□□ 2.02
LAMA5-208ENST00000474128 DHX29Q7Z478 1369 aaKnown RBP27.63■■■□□ 2.01
LAMA5-208ENST00000474128 NCOA2Q15596 1464 aa27.63■■■□□ 2.01
LAMA5-208ENST00000474128 LTBP4Q8N2S1 1624 aa27.61■■■□□ 2.01
LAMA5-208ENST00000474128 RSPH4AQ5TD94 716 aa27.61■■■□□ 2.01
LAMA5-208ENST00000474128 CCDC141Q6ZP82 1450 aa27.61■■■□□ 2.01
LAMA5-208ENST00000474128 MYO3AQ8NEV4 1616 aa27.6■■■□□ 2.01
LAMA5-208ENST00000474128 ZNF142P52746 1687 aaPredicted RBP27.59■■■□□ 2.01
LAMA5-208ENST00000474128 CAMSAP2Q08AD1 1489 aa27.58■■■□□ 2.01
LAMA5-208ENST00000474128 PLA2R1Q13018 1463 aa27.58■■■□□ 2.01
LAMA5-208ENST00000474128 CEP170BQ9Y4F5 1589 aaPredicted RBP27.57■■■□□ 2
LAMA5-208ENST00000474128 NCKAP5LQ9HCH0 1330 aa27.57■■■□□ 2
LAMA5-208ENST00000474128 IQSEC2Q5JU85 1478 aa27.57■■■□□ 2
LAMA5-208ENST00000474128 PKD2Q13563 968 aa27.56■■■□□ 2
LAMA5-208ENST00000474128 KIF3BO15066 747 aa27.53■■■□□ 2
LAMA5-208ENST00000474128 TCOF1Q13428 1488 aaKnown RBP27.51■■■□□ 2
LAMA5-208ENST00000474128 FAM135AQ9P2D6 1515 aa27.51■■□□□ 1.99
LAMA5-208ENST00000474128 VPS8Q8N3P4 1428 aa27.5■■□□□ 1.99
LAMA5-208ENST00000474128 A2ML1A8K2U0 1454 aa27.5■■□□□ 1.99
LAMA5-208ENST00000474128 ARHGEF5Q12774 1597 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms