RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 ZMYM4Q5VZL5 1548 aa32.73■■■□□ 2.83
SNX13-206ENST00000474067 ARHGEF40Q8TER5 1519 aa32.71■■■□□ 2.83
SNX13-206ENST00000474067 POGZQ7Z3K3 1410 aa32.69■■■□□ 2.82
SNX13-206ENST00000474067 ZNF518AQ6AHZ1 1483 aa32.66■■■□□ 2.82
SNX13-206ENST00000474067 ZFYVE16Q7Z3T8 1539 aa32.66■■■□□ 2.82
SNX13-206ENST00000474067 PREX2Q70Z35 1606 aa32.66■■■□□ 2.82
SNX13-206ENST00000474067 ARID4BQ4LE39 1312 aaPredicted RBP32.65■■■□□ 2.82
SNX13-206ENST00000474067 MTUS2Q5JR59 1369 aa32.65■■■□□ 2.82
SNX13-206ENST00000474067 CDC42BPBQ9Y5S2 1711 aa32.6■■■□□ 2.81
SNX13-206ENST00000474067 EHBP1L1Q8N3D4 1523 aa32.56■■■□□ 2.8
SNX13-206ENST00000474067 CDC42BPAQ5VT25 1732 aa32.54■■■□□ 2.8
SNX13-206ENST00000474067 CCNB3Q8WWL7 1395 aa32.53■■■□□ 2.8
SNX13-206ENST00000474067 BCORL1Q5H9F3 1711 aa32.52■■■□□ 2.8
SNX13-206ENST00000474067 LOC105371045A0A1W2PR82 267 aa32.52■■■□□ 2.8
SNX13-206ENST00000474067 KDM5CP41229 1560 aa32.51■■■□□ 2.79
SNX13-206ENST00000474067 MYT1LQ9UL68 1186 aa32.51■■■□□ 2.79
SNX13-206ENST00000474067 ABCC1P33527 1531 aa32.51■■■□□ 2.79
SNX13-206ENST00000474067 ADAMTSL3P82987 1691 aa32.5■■■□□ 2.79
SNX13-206ENST00000474067 VPS8Q8N3P4 1428 aa32.5■■■□□ 2.79
SNX13-206ENST00000474067 YEATS2Q9ULM3 1422 aa32.49■■■□□ 2.79
SNX13-206ENST00000474067 ATP10AO60312 1499 aa32.48■■■□□ 2.79
SNX13-206ENST00000474067 PLEKHH2Q8IVE3 1493 aa32.48■■■□□ 2.79
SNX13-206ENST00000474067 GPATCH8Q9UKJ3 1502 aaKnown RBP32.47■■■□□ 2.79
SNX13-206ENST00000474067 C9orf84Q5VXU9 1444 aa32.47■■■□□ 2.79
SNX13-206ENST00000474067 HECW2Q9P2P5 1572 aa32.47■■■□□ 2.79
SNX13-206ENST00000474067 CFDP1Q9UEE9 299 aaPredicted RBP32.46■■■□□ 2.79
SNX13-206ENST00000474067 ITSN2Q9NZM3 1697 aa32.44■■■□□ 2.78
SNX13-206ENST00000474067 AFAP1Q8N556 730 aa32.44■■■□□ 2.78
SNX13-206ENST00000474067 MLH3Q9UHC1 1453 aa32.43■■■□□ 2.78
SNX13-206ENST00000474067 ZNF777Q9ULD5 760 aaPredicted RBP32.43■■■□□ 2.78
SNX13-206ENST00000474067 PTPRMP28827 1452 aa32.4■■■□□ 2.78
SNX13-206ENST00000474067 KIAA1107Q9UPP5 1409 aa32.39■■■□□ 2.78
SNX13-206ENST00000474067 SUPT6HQ7KZ85 1726 aaKnown RBP32.37■■■□□ 2.77
SNX13-206ENST00000474067 TIAM1Q13009 1591 aa32.37■■■□□ 2.77
SNX13-206ENST00000474067 MADDQ8WXG6 1647 aa32.37■■■□□ 2.77
SNX13-206ENST00000474067 SAMD9LQ8IVG5 1584 aa32.36■■■□□ 2.77
SNX13-206ENST00000474067 REREQ9P2R6 1566 aa32.35■■■□□ 2.77
SNX13-206ENST00000474067 TRAPPC8Q9Y2L5 1435 aa32.34■■■□□ 2.77
SNX13-206ENST00000474067 MAP3K1Q13233 1512 aa32.33■■■□□ 2.77
SNX13-206ENST00000474067 ARHGEF12Q9NZN5 1544 aa32.33■■■□□ 2.77
SNX13-206ENST00000474067 SYCP2Q9BX26 1530 aa32.32■■■□□ 2.76
SNX13-206ENST00000474067 DIP2CQ9Y2E4 1556 aa32.31■■■□□ 2.76
SNX13-206ENST00000474067 APLP2Q06481 763 aa32.29■■■□□ 2.76
SNX13-206ENST00000474067 RIMS1Q86UR5 1692 aaKnown RBP32.28■■■□□ 2.76
SNX13-206ENST00000474067 SPAG9O60271 1321 aaKnown RBP32.27■■■□□ 2.76
SNX13-206ENST00000474067 MLECQ14165 292 aa32.26■■■□□ 2.75
SNX13-206ENST00000474067 NCOA2Q15596 1464 aa32.26■■■□□ 2.75
SNX13-206ENST00000474067 ABCA6Q8N139 1617 aa32.25■■■□□ 2.75
SNX13-206ENST00000474067 FER1L4A9Z1Z3 1794 aa32.24■■■□□ 2.75
SNX13-206ENST00000474067 LRRC9Q6ZRR7 1453 aa32.24■■■□□ 2.75
SNX13-206ENST00000474067 HNRNPMP52272 730 aaKnown RBP eCLIP32.24■■■□□ 2.758e-7■■■■■ 42.1
SNX13-206ENST00000474067 AGLP35573 1532 aa32.24■■■□□ 2.75
SNX13-206ENST00000474067 KIDINS220Q9ULH0 1771 aa32.22■■■□□ 2.75
SNX13-206ENST00000474067 RSPH4AQ5TD94 716 aa32.22■■■□□ 2.75
SNX13-206ENST00000474067 SIGLEC1Q9BZZ2 1709 aa32.21■■■□□ 2.75
SNX13-206ENST00000474067 ESF1Q9H501 851 aaKnown RBP32.19■■■□□ 2.74
SNX13-206ENST00000474067 ATP7AQ04656 1500 aa32.18■■■□□ 2.74
SNX13-206ENST00000474067 INO80Q9ULG1 1556 aaPredicted RBP32.14■■■□□ 2.74
SNX13-206ENST00000474067 RTEL1-TNFRSF6BF6WH68 1400 aa32.11■■■□□ 2.73
SNX13-206ENST00000474067 CAMSAP2Q08AD1 1489 aa32.1■■■□□ 2.73
SNX13-206ENST00000474067 MBD5Q9P267 1494 aa32.1■■■□□ 2.73
SNX13-206ENST00000474067 CCDC141Q6ZP82 1450 aa32.09■■■□□ 2.73
SNX13-206ENST00000474067 CNTLNQ9NXG0 1405 aa32.09■■■□□ 2.73
SNX13-206ENST00000474067 ZNF644Q9H582 1327 aaPredicted RBP32.07■■■□□ 2.72
SNX13-206ENST00000474067 A2MP01023 1474 aa32.07■■■□□ 2.72
SNX13-206ENST00000474067 ADGBQ8N7X0 1667 aa32.06■■■□□ 2.72
SNX13-206ENST00000474067 MIA2Q96PC5 1412 aa32.06■■■□□ 2.72
SNX13-206ENST00000474067 TSPY4P0CV99 314 aa32.03■■■□□ 2.72
SNX13-206ENST00000474067 TSPY10P0CW01 314 aa32.03■■■□□ 2.72
SNX13-206ENST00000474067 PLPPR3Q6T4P5 718 aa32.03■■■□□ 2.72
SNX13-206ENST00000474067 ARHGEF5Q12774 1597 aa32.02■■■□□ 2.72
SNX13-206ENST00000474067 MYOM3Q5VTT5 1437 aa32.01■■■□□ 2.72
SNX13-206ENST00000474067 PLXNC1O60486 1568 aa32■■■□□ 2.71
SNX13-206ENST00000474067 KANK4Q5T7N3 995 aaPredicted RBP32■■■□□ 2.71
SNX13-206ENST00000474067 LMTK3Q96Q04 1460 aa31.98■■■□□ 2.71
SNX13-206ENST00000474067 PPP6R1Q9UPN7 881 aa31.98■■■□□ 2.71
SNX13-206ENST00000474067 PREX1Q8TCU6 1659 aa31.93■■■□□ 2.7
SNX13-206ENST00000474067 MROH2AA6NES4 1674 aa31.92■■■□□ 2.7
SNX13-206ENST00000474067 DHX29Q7Z478 1369 aaKnown RBP31.92■■■□□ 2.7
SNX13-206ENST00000474067 SETD1BQ9UPS6 1966 aaKnown RBP31.9■■■□□ 2.7
SNX13-206ENST00000474067 UHRF1BP1Q6BDS2 1440 aa31.88■■■□□ 2.69
SNX13-206ENST00000474067 C3P01024 1663 aa31.87■■■□□ 2.69
SNX13-206ENST00000474067 CEBPAP49715 358 aaPredicted RBP31.87■■■□□ 2.69
SNX13-206ENST00000474067 GGT6Q6P531 493 aa31.86■■■□□ 2.69
SNX13-206ENST00000474067 MAST1Q9Y2H9 1570 aa31.85■■■□□ 2.69
SNX13-206ENST00000474067 FAM135AQ9P2D6 1515 aa31.84■■■□□ 2.69
SNX13-206ENST00000474067 NPATQ14207 1427 aa31.82■■■□□ 2.68
SNX13-206ENST00000474067 ZMYM3Q14202 1370 aa31.81■■■□□ 2.68
SNX13-206ENST00000474067 KIF3BO15066 747 aa31.78■■■□□ 2.68
SNX13-206ENST00000474067 PTPN23Q9H3S7 1636 aa31.78■■■□□ 2.68
SNX13-206ENST00000474067 CLTCQ00610 1675 aaKnown RBP31.76■■■□□ 2.68
SNX13-206ENST00000474067 FGD6Q6ZV73 1430 aa31.75■■■□□ 2.67
SNX13-206ENST00000474067 SHANK2Q9UPX8 1470 aa31.74■■■□□ 2.67
SNX13-206ENST00000474067 HSPA2P54652 639 aa31.74■■■□□ 2.67
SNX13-206ENST00000474067 DMRT2Q9Y5R5 561 aa31.72■■■□□ 2.67
SNX13-206ENST00000474067 TCOF1Q13428 1488 aaKnown RBP31.72■■■□□ 2.67
SNX13-206ENST00000474067 KDM5DQ9BY66 1539 aa31.7■■■□□ 2.66
SNX13-206ENST00000474067 EIF2AK4Q9P2K8 1649 aaKnown RBP31.69■■■□□ 2.66
SNX13-206ENST00000474067 DUOX2Q9NRD8 1548 aa31.67■■■□□ 2.66
SNX13-206ENST00000474067 WASHC2CQ9Y4E1 1318 aa31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms