RNA–Protein interactions for RNA: ENST00000473869.5

TARDBP-206, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,946 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-206ENST00000473869 ZNF644Q9H582 1327 aaPredicted RBP16.15■□□□□ 0.18
TARDBP-206ENST00000473869 CAMSAP2Q08AD1 1489 aa16.15■□□□□ 0.18
TARDBP-206ENST00000473869 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.14■□□□□ 0.17
TARDBP-206ENST00000473869 PTPRKQ15262 1439 aa16.14■□□□□ 0.17
TARDBP-206ENST00000473869 TTC37Q6PGP7 1564 aa16.13■□□□□ 0.17
TARDBP-206ENST00000473869 RAB3GAP2Q9H2M9 1393 aa16.12■□□□□ 0.17
TARDBP-206ENST00000473869 PREX2Q70Z35 1606 aa16.12■□□□□ 0.17
TARDBP-206ENST00000473869 DNMT1P26358 1616 aaKnown RBP16.12■□□□□ 0.17
TARDBP-206ENST00000473869 MAPKBP1O60336 1514 aa16.11■□□□□ 0.17
TARDBP-206ENST00000473869 DAPK1P53355 1430 aa16.11■□□□□ 0.17
TARDBP-206ENST00000473869 MYO5CQ9NQX4 1742 aa16.11■□□□□ 0.17
TARDBP-206ENST00000473869 CDC42BPBQ9Y5S2 1711 aa16.1■□□□□ 0.17
TARDBP-206ENST00000473869 HFM1A2PYH4 1435 aa16.1■□□□□ 0.17
TARDBP-206ENST00000473869 CHIC2Q9UKJ5 165 aa16.09■□□□□ 0.17
TARDBP-206ENST00000473869 ABCC5O15440 1437 aa16.08■□□□□ 0.17
TARDBP-206ENST00000473869 ARHGAP5Q13017 1502 aa16.08■□□□□ 0.16
TARDBP-206ENST00000473869 RRP7BPQ9NSQ0 103 aa16.06■□□□□ 0.16
TARDBP-206ENST00000473869 PLCH2O75038 1416 aa16.05■□□□□ 0.16
TARDBP-206ENST00000473869 AKNAQ7Z591 1439 aa16.05■□□□□ 0.16
TARDBP-206ENST00000473869 DHX57Q6P158 1386 aaKnown RBP16.05■□□□□ 0.16
TARDBP-206ENST00000473869 NAIPQ13075 1403 aa16.05■□□□□ 0.16
TARDBP-206ENST00000473869 ROCK1Q13464 1354 aa16.04■□□□□ 0.16
TARDBP-206ENST00000473869 SAMD9LQ8IVG5 1584 aa16.04■□□□□ 0.16
TARDBP-206ENST00000473869 EFCAB2Q5VUJ9 269 aa16.03■□□□□ 0.16
TARDBP-206ENST00000473869 ABCA9Q8IUA7 1624 aa16.03■□□□□ 0.16
TARDBP-206ENST00000473869 CROCC2H7BZ55 1655 aa16.02■□□□□ 0.16
TARDBP-206ENST00000473869 GCC2Q8IWJ2 1684 aa16.02■□□□□ 0.16
TARDBP-206ENST00000473869 PLEKHH2Q8IVE3 1493 aa16.02■□□□□ 0.15
TARDBP-206ENST00000473869 ARHGEF5Q12774 1597 aa16.02■□□□□ 0.15
TARDBP-206ENST00000473869 HNRNPMP52272 730 aaKnown RBP eCLIP16.02■□□□□ 0.151e-6■■□□□ 12.6
TARDBP-206ENST00000473869 RSPH4AQ5TD94 716 aa16.02■□□□□ 0.15
TARDBP-206ENST00000473869 CLSPNQ9HAW4 1339 aa16.01■□□□□ 0.15
TARDBP-206ENST00000473869 ARAP3Q8WWN8 1544 aa16.01■□□□□ 0.15
TARDBP-206ENST00000473869 TSPY4P0CV99 314 aa16.01■□□□□ 0.15
TARDBP-206ENST00000473869 TSPY10P0CW01 314 aa16.01■□□□□ 0.15
TARDBP-206ENST00000473869 ADGBQ8N7X0 1667 aa16■□□□□ 0.15
TARDBP-206ENST00000473869 DIP2BQ9P265 1576 aa16■□□□□ 0.15
TARDBP-206ENST00000473869 FAM69CQ0P6D2 419 aa16■□□□□ 0.15
TARDBP-206ENST00000473869 MBD5Q9P267 1494 aa15.99■□□□□ 0.15
TARDBP-206ENST00000473869 SHANK2Q9UPX8 1470 aa15.99■□□□□ 0.15
TARDBP-206ENST00000473869 KIAA1107Q9UPP5 1409 aa15.99■□□□□ 0.15
TARDBP-206ENST00000473869 CCDC141Q6ZP82 1450 aa15.99■□□□□ 0.15
TARDBP-206ENST00000473869 SYCP2Q9BX26 1530 aa15.98■□□□□ 0.15
TARDBP-206ENST00000473869 ANKRD30AQ9BXX3 1397 aa15.98■□□□□ 0.15
TARDBP-206ENST00000473869 C9orf84Q5VXU9 1444 aa15.98■□□□□ 0.15
TARDBP-206ENST00000473869 ADGRL2O95490 1459 aa15.97■□□□□ 0.15
TARDBP-206ENST00000473869 NCOA1Q15788 1441 aa15.97■□□□□ 0.15
TARDBP-206ENST00000473869 CD109Q6YHK3 1445 aa15.97■□□□□ 0.15
TARDBP-206ENST00000473869 GLI2P10070 1586 aa15.96■□□□□ 0.14
TARDBP-206ENST00000473869 ACIN1Q9UKV3 1341 aaKnown RBP15.95■□□□□ 0.14
TARDBP-206ENST00000473869 FANCAO15360 1455 aa15.94■□□□□ 0.14
TARDBP-206ENST00000473869 MAP3K4Q9Y6R4 1608 aa15.94■□□□□ 0.14
TARDBP-206ENST00000473869 KIF13AQ9H1H9 1805 aa15.94■□□□□ 0.14
TARDBP-206ENST00000473869 ABCC1P33527 1531 aa15.94■□□□□ 0.14
TARDBP-206ENST00000473869 TSPOAP1O95153 1857 aa15.92■□□□□ 0.14
TARDBP-206ENST00000473869 KDM6BO15054 1643 aa15.91■□□□□ 0.14
TARDBP-206ENST00000473869 ARHGEF12Q9NZN5 1544 aa15.91■□□□□ 0.14
TARDBP-206ENST00000473869 TRIM52Q96A61 297 aa15.91■□□□□ 0.14
TARDBP-206ENST00000473869 TRHP20396 242 aaPredicted RBP15.9■□□□□ 0.14
TARDBP-206ENST00000473869 MAST1Q9Y2H9 1570 aa15.9■□□□□ 0.14
TARDBP-206ENST00000473869 KIF15Q9NS87 1388 aa15.88■□□□□ 0.13
TARDBP-206ENST00000473869 ANKRD50Q9ULJ7 1429 aa15.88■□□□□ 0.13
TARDBP-206ENST00000473869 ADGRL1O94910 1474 aa15.88■□□□□ 0.13
TARDBP-206ENST00000473869 CFAP74Q9C0B2 1584 aa15.88■□□□□ 0.13
TARDBP-206ENST00000473869 TRAPPC8Q9Y2L5 1435 aa15.87■□□□□ 0.13
TARDBP-206ENST00000473869 SCAPERQ9BY12 1400 aa15.86■□□□□ 0.13
TARDBP-206ENST00000473869 PPRC1Q5VV67 1664 aaKnown RBP15.85■□□□□ 0.13
TARDBP-206ENST00000473869 PLXNC1O60486 1568 aa15.84■□□□□ 0.13
TARDBP-206ENST00000473869 SPAG9O60271 1321 aaKnown RBP15.84■□□□□ 0.13
TARDBP-206ENST00000473869 AFAP1Q8N556 730 aa15.84■□□□□ 0.13
TARDBP-206ENST00000473869 TEX14Q8IWB6 1497 aa15.82■□□□□ 0.12
TARDBP-206ENST00000473869 NEO1Q92859 1461 aa15.82■□□□□ 0.12
TARDBP-206ENST00000473869 RTEL1-TNFRSF6BF6WH68 1400 aa15.82■□□□□ 0.12
TARDBP-206ENST00000473869 MPHOSPH9Q99550 1183 aa15.82■□□□□ 0.12
TARDBP-206ENST00000473869 DUOX2Q9NRD8 1548 aa15.79■□□□□ 0.12
TARDBP-206ENST00000473869 ZNF518AQ6AHZ1 1483 aa15.79■□□□□ 0.12
TARDBP-206ENST00000473869 MYT1LQ9UL68 1186 aa15.79■□□□□ 0.12
TARDBP-206ENST00000473869 SLC4A1APQ9BWU0 796 aaKnown RBP15.78■□□□□ 0.12
TARDBP-206ENST00000473869 ZFYVE16Q7Z3T8 1539 aa15.78■□□□□ 0.12
TARDBP-206ENST00000473869 ATP7AQ04656 1500 aa15.77■□□□□ 0.12
TARDBP-206ENST00000473869 NEUROD1Q13562 356 aa15.77■□□□□ 0.12
TARDBP-206ENST00000473869 SIN3AQ96ST3 1273 aa15.77■□□□□ 0.12
TARDBP-206ENST00000473869 INO80Q9ULG1 1556 aaPredicted RBP15.76■□□□□ 0.11
TARDBP-206ENST00000473869 NUP155O75694 1391 aa15.76■□□□□ 0.11
TARDBP-206ENST00000473869 ERBINQ96RT1 1412 aa15.76■□□□□ 0.11
TARDBP-206ENST00000473869 POGZQ7Z3K3 1410 aa15.75■□□□□ 0.11
TARDBP-206ENST00000473869 DENND4BO75064 1496 aaPredicted RBP15.75■□□□□ 0.11
TARDBP-206ENST00000473869 PZPP20742 1482 aa15.75■□□□□ 0.11
TARDBP-206ENST00000473869 RAPGEF3O95398 923 aa15.74■□□□□ 0.11
TARDBP-206ENST00000473869 TIMELESSQ9UNS1 1208 aa15.73■□□□□ 0.11
TARDBP-206ENST00000473869 KDM5DQ9BY66 1539 aa15.73■□□□□ 0.11
TARDBP-206ENST00000473869 KDM5CP41229 1560 aa15.72■□□□□ 0.11
TARDBP-206ENST00000473869 RICTORQ6R327 1708 aa15.71■□□□□ 0.11
TARDBP-206ENST00000473869 FOXD1Q16676 465 aa15.71■□□□□ 0.11
TARDBP-206ENST00000473869 KIDINS220Q9ULH0 1771 aa15.71■□□□□ 0.1
TARDBP-206ENST00000473869 UNC13BO14795 1591 aa15.7■□□□□ 0.1
TARDBP-206ENST00000473869 PKD2Q13563 968 aa15.7■□□□□ 0.1
TARDBP-206ENST00000473869 FRMPD1Q5SYB0 1578 aa15.69■□□□□ 0.1
TARDBP-206ENST00000473869 HECW2Q9P2P5 1572 aa15.69■□□□□ 0.1
TARDBP-206ENST00000473869 MLH3Q9UHC1 1453 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms