RNA–Protein interactions for RNA: ENST00000473843.1

MACF1-215, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-215ENST00000473843 SETD1BQ9UPS6 1966 aaKnown RBP19.5■□□□□ 0.71
MACF1-215ENST00000473843 IQSEC2Q5JU85 1478 aa19.48■□□□□ 0.71
MACF1-215ENST00000473843 MAGI2Q86UL8 1455 aa19.48■□□□□ 0.71
MACF1-215ENST00000473843 RAPGEF6Q8TEU7 1601 aa19.47■□□□□ 0.71
MACF1-215ENST00000473843 ARHGEF12Q9NZN5 1544 aa19.46■□□□□ 0.71
MACF1-215ENST00000473843 MLECQ14165 292 aa19.44■□□□□ 0.7
MACF1-215ENST00000473843 PTPRTO14522 1441 aa19.43■□□□□ 0.7
MACF1-215ENST00000473843 LTBP4Q8N2S1 1624 aa19.43■□□□□ 0.7
MACF1-215ENST00000473843 HECW1Q76N89 1606 aa19.42■□□□□ 0.7
MACF1-215ENST00000473843 UHRF1BP1Q6BDS2 1440 aa19.42■□□□□ 0.7
MACF1-215ENST00000473843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.38■□□□□ 0.69
MACF1-215ENST00000473843 HNRNPUL2Q1KMD3 747 aaKnown RBP19.38■□□□□ 0.69
MACF1-215ENST00000473843 SAMD9Q5K651 1589 aa19.37■□□□□ 0.69
MACF1-215ENST00000473843 NUP153P49790 1475 aaKnown RBP19.36■□□□□ 0.69
MACF1-215ENST00000473843 P3H3Q8IVL6 736 aa19.36■□□□□ 0.69
MACF1-215ENST00000473843 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.35■□□□□ 0.69
MACF1-215ENST00000473843 CEBPAP49715 358 aaPredicted RBP19.35■□□□□ 0.69
MACF1-215ENST00000473843 ATP10AO60312 1499 aa19.35■□□□□ 0.69
MACF1-215ENST00000473843 PRXQ9BXM0 1461 aa19.35■□□□□ 0.69
MACF1-215ENST00000473843 C9orf84Q5VXU9 1444 aa19.34■□□□□ 0.69
MACF1-215ENST00000473843 C3P01024 1663 aa19.29■□□□□ 0.68
MACF1-215ENST00000473843 PLEKHD1A6NEE1 506 aa19.28■□□□□ 0.68
MACF1-215ENST00000473843 SCAPERQ9BY12 1400 aa19.27■□□□□ 0.68
MACF1-215ENST00000473843 NCOA1Q15788 1441 aa19.25■□□□□ 0.67
MACF1-215ENST00000473843 MED1Q15648 1581 aaPredicted RBP19.23■□□□□ 0.67
MACF1-215ENST00000473843 UBAP1LF5GYI3 381 aa19.2■□□□□ 0.66
MACF1-215ENST00000473843 PLCH2O75038 1416 aa19.19■□□□□ 0.66
MACF1-215ENST00000473843 REREQ9P2R6 1566 aa19.19■□□□□ 0.66
MACF1-215ENST00000473843 TRAPPC8Q9Y2L5 1435 aa19.18■□□□□ 0.66
MACF1-215ENST00000473843 MYO5CQ9NQX4 1742 aa19.18■□□□□ 0.66
MACF1-215ENST00000473843 KDM5CP41229 1560 aa19.17■□□□□ 0.66
MACF1-215ENST00000473843 ZNF518AQ6AHZ1 1483 aa19.16■□□□□ 0.66
MACF1-215ENST00000473843 DIP2CQ9Y2E4 1556 aa19.16■□□□□ 0.66
MACF1-215ENST00000473843 CAMSAP1Q5T5Y3 1602 aa19.16■□□□□ 0.66
MACF1-215ENST00000473843 ZNF335Q9H4Z2 1342 aaPredicted RBP19.13■□□□□ 0.65
MACF1-215ENST00000473843 AGLP35573 1532 aa19.12■□□□□ 0.65
MACF1-215ENST00000473843 ABCA6Q8N139 1617 aa19.11■□□□□ 0.65
MACF1-215ENST00000473843 EFCAB2Q5VUJ9 269 aa19.09■□□□□ 0.65
MACF1-215ENST00000473843 ESF1Q9H501 851 aaKnown RBP19.09■□□□□ 0.65
MACF1-215ENST00000473843 CDK13Q14004 1512 aaKnown RBP19.09■□□□□ 0.65
MACF1-215ENST00000473843 CNTLNQ9NXG0 1405 aa19.08■□□□□ 0.65
MACF1-215ENST00000473843 SUPT6HQ7KZ85 1726 aaKnown RBP19.08■□□□□ 0.64
MACF1-215ENST00000473843 MROH2AA6NES4 1674 aa19.08■□□□□ 0.64
MACF1-215ENST00000473843 ZNF142P52746 1687 aaPredicted RBP19.07■□□□□ 0.64
MACF1-215ENST00000473843 NPATQ14207 1427 aa19.07■□□□□ 0.64
MACF1-215ENST00000473843 HSPA1LP34931 641 aa19.05■□□□□ 0.64
MACF1-215ENST00000473843 PLA2R1Q13018 1463 aa19.04■□□□□ 0.64
MACF1-215ENST00000473843 MLH3Q9UHC1 1453 aa19.03■□□□□ 0.64
MACF1-215ENST00000473843 NCKAP5LQ9HCH0 1330 aa19.03■□□□□ 0.64
MACF1-215ENST00000473843 AFAP1Q8N556 730 aa19.03■□□□□ 0.64
MACF1-215ENST00000473843 MYT1LQ9UL68 1186 aa19.03■□□□□ 0.64
MACF1-215ENST00000473843 ARHGAP5Q13017 1502 aa19.01■□□□□ 0.63
MACF1-215ENST00000473843 MYO3AQ8NEV4 1616 aa19.01■□□□□ 0.63
MACF1-215ENST00000473843 TCOF1Q13428 1488 aaKnown RBP19.01■□□□□ 0.63
MACF1-215ENST00000473843 PKD2Q13563 968 aa19■□□□□ 0.63
MACF1-215ENST00000473843 KIF14Q15058 1648 aa19■□□□□ 0.63
MACF1-215ENST00000473843 SCAF1Q9H7N4 1312 aaKnown RBP19■□□□□ 0.63
MACF1-215ENST00000473843 RANGAP1P46060 587 aaPredicted RBP18.98■□□□□ 0.63
MACF1-215ENST00000473843 CEP170BQ9Y4F5 1589 aaPredicted RBP18.97■□□□□ 0.63
MACF1-215ENST00000473843 PIP4K2BP78356 416 aa18.96■□□□□ 0.63
MACF1-215ENST00000473843 KIDINS220Q9ULH0 1771 aa18.96■□□□□ 0.63
MACF1-215ENST00000473843 CDC42BPBQ9Y5S2 1711 aa18.95■□□□□ 0.62
MACF1-215ENST00000473843 TOM1O60784 492 aa18.95■□□□□ 0.62
MACF1-215ENST00000473843 ITSN2Q9NZM3 1697 aa18.95■□□□□ 0.62
MACF1-215ENST00000473843 CPS1P31327 1500 aa18.94■□□□□ 0.62
MACF1-215ENST00000473843 ZMYM3Q14202 1370 aa18.93■□□□□ 0.62
MACF1-215ENST00000473843 ABCC1P33527 1531 aa18.92■□□□□ 0.62
MACF1-215ENST00000473843 CSRNP3Q8WYN3 585 aa18.91■□□□□ 0.62
MACF1-215ENST00000473843 CLTCQ00610 1675 aaKnown RBP18.91■□□□□ 0.62
MACF1-215ENST00000473843 POLR1AO95602 1720 aaPredicted RBP18.91■□□□□ 0.62
MACF1-215ENST00000473843 PREX2Q70Z35 1606 aa18.89■□□□□ 0.62
MACF1-215ENST00000473843 CDK11AQ9UQ88 783 aaPredicted RBP18.89■□□□□ 0.61
MACF1-215ENST00000473843 TROQ12816 1431 aaPredicted RBP18.88■□□□□ 0.61
MACF1-215ENST00000473843 CLIP1P30622 1438 aa18.86■□□□□ 0.61
MACF1-215ENST00000473843 PTPRKQ15262 1439 aa18.86■□□□□ 0.61
MACF1-215ENST00000473843 ALKQ9UM73 1620 aa18.85■□□□□ 0.61
MACF1-215ENST00000473843 SHANK2Q9UPX8 1470 aa18.84■□□□□ 0.61
MACF1-215ENST00000473843 DNMT1P26358 1616 aaKnown RBP18.83■□□□□ 0.61
MACF1-215ENST00000473843 NEURL4Q96JN8 1562 aa18.83■□□□□ 0.6
MACF1-215ENST00000473843 A2ML1A8K2U0 1454 aa18.82■□□□□ 0.6
MACF1-215ENST00000473843 FMN1Q68DA7 1419 aa18.82■□□□□ 0.6
MACF1-215ENST00000473843 SAMD9LQ8IVG5 1584 aa18.81■□□□□ 0.6
MACF1-215ENST00000473843 LRRIQ1Q96JM4 1722 aa18.8■□□□□ 0.6
MACF1-215ENST00000473843 ATP1B4Q9UN42 357 aaPredicted RBP18.79■□□□□ 0.6
MACF1-215ENST00000473843 PLXNC1O60486 1568 aa18.79■□□□□ 0.6
MACF1-215ENST00000473843 VWDEQ8N2E2 1590 aa18.78■□□□□ 0.6
MACF1-215ENST00000473843 CDC42BPAQ5VT25 1732 aa18.77■□□□□ 0.59
MACF1-215ENST00000473843 EEA1Q15075 1411 aa18.76■□□□□ 0.59
MACF1-215ENST00000473843 RGS17Q9UGC6 210 aaPredicted RBP18.75■□□□□ 0.59
MACF1-215ENST00000473843 RNF17Q9BXT8 1623 aaKnown RBP18.74■□□□□ 0.59
MACF1-215ENST00000473843 ATP7AQ04656 1500 aa18.73■□□□□ 0.59
MACF1-215ENST00000473843 INO80Q9ULG1 1556 aaPredicted RBP18.72■□□□□ 0.59
MACF1-215ENST00000473843 SYCP2Q9BX26 1530 aa18.71■□□□□ 0.59
MACF1-215ENST00000473843 A2MP01023 1474 aa18.71■□□□□ 0.59
MACF1-215ENST00000473843 SYNMO15061 1565 aa18.7■□□□□ 0.58
MACF1-215ENST00000473843 SPAG9O60271 1321 aaKnown RBP18.7■□□□□ 0.58
MACF1-215ENST00000473843 DEPDC5O75140 1603 aa18.69■□□□□ 0.58
MACF1-215ENST00000473843 STRCP1A6NGW2 1772 aa18.68■□□□□ 0.58
MACF1-215ENST00000473843 ADGBQ8N7X0 1667 aa18.67■□□□□ 0.58
MACF1-215ENST00000473843 MED14O60244 1454 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms