RNA–Protein interactions for RNA: ENST00000473614.1

FN1-218, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-218ENST00000473614 SPINK5Q9NQ38 1064 aaPredicted RBP10.86□□□□□ -0.67
FN1-218ENST00000473614 ATP10BO94823 1461 aa10.86□□□□□ -0.67
FN1-218ENST00000473614 ABCC2Q92887 1545 aa10.85□□□□□ -0.67
FN1-218ENST00000473614 OSCARQ8IYS5 282 aa10.85□□□□□ -0.67
FN1-218ENST00000473614 MYOM3Q5VTT5 1437 aa10.84□□□□□ -0.67
FN1-218ENST00000473614 TROQ12816 1431 aaPredicted RBP10.84□□□□□ -0.67
FN1-218ENST00000473614 FGD6Q6ZV73 1430 aa10.84□□□□□ -0.67
FN1-218ENST00000473614 CDK11AQ9UQ88 783 aaPredicted RBP10.83□□□□□ -0.68
FN1-218ENST00000473614 MIA2Q96PC5 1412 aa10.82□□□□□ -0.68
FN1-218ENST00000473614 TCOF1Q13428 1488 aaKnown RBP10.81□□□□□ -0.68
FN1-218ENST00000473614 KDM5BQ9UGL1 1544 aa10.8□□□□□ -0.68
FN1-218ENST00000473614 HRCP23327 699 aa10.79□□□□□ -0.68
FN1-218ENST00000473614 PTPN23Q9H3S7 1636 aa10.79□□□□□ -0.68
FN1-218ENST00000473614 ITSN2Q9NZM3 1697 aa10.79□□□□□ -0.68
FN1-218ENST00000473614 KIF14Q15058 1648 aa10.78□□□□□ -0.68
FN1-218ENST00000473614 ABCC10Q5T3U5 1492 aa10.78□□□□□ -0.68
FN1-218ENST00000473614 ZCCHC11Q5TAX3 1644 aaKnown RBP10.76□□□□□ -0.69
FN1-218ENST00000473614 PLEKHD1A6NEE1 506 aa10.76□□□□□ -0.69
FN1-218ENST00000473614 FKBP8Q14318 412 aa10.76□□□□□ -0.69
FN1-218ENST00000473614 CDC42BPAQ5VT25 1732 aa10.75□□□□□ -0.69
FN1-218ENST00000473614 GPATCH8Q9UKJ3 1502 aaKnown RBP10.75□□□□□ -0.69
FN1-218ENST00000473614 POLA2Q14181 598 aa10.75□□□□□ -0.69
FN1-218ENST00000473614 ARID3CA6NKF2 412 aa10.73□□□□□ -0.69
FN1-218ENST00000473614 DNMT1P26358 1616 aaKnown RBP10.71□□□□□ -0.69
FN1-218ENST00000473614 ZEB1P37275 1124 aaPredicted RBP10.71□□□□□ -0.69
FN1-218ENST00000473614 PREX2Q70Z35 1606 aa10.71□□□□□ -0.69
FN1-218ENST00000473614 AKNAQ7Z591 1439 aa10.71□□□□□ -0.69
FN1-218ENST00000473614 CDC42BPBQ9Y5S2 1711 aa10.7□□□□□ -0.7
FN1-218ENST00000473614 PTPRKQ15262 1439 aa10.7□□□□□ -0.7
FN1-218ENST00000473614 FAM50AQ14320 339 aaKnown RBP10.7□□□□□ -0.7
FN1-218ENST00000473614 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.69□□□□□ -0.7
FN1-218ENST00000473614 SETD5Q9C0A6 1442 aa10.69□□□□□ -0.7
FN1-218ENST00000473614 HFM1A2PYH4 1435 aa10.68□□□□□ -0.7
FN1-218ENST00000473614 MYO5CQ9NQX4 1742 aa10.68□□□□□ -0.7
FN1-218ENST00000473614 TTC37Q6PGP7 1564 aa10.68□□□□□ -0.7
FN1-218ENST00000473614 ARAP3Q8WWN8 1544 aa10.68□□□□□ -0.7
FN1-218ENST00000473614 CAMSAP2Q08AD1 1489 aa10.68□□□□□ -0.7
FN1-218ENST00000473614 CROCC2H7BZ55 1655 aa10.67□□□□□ -0.7
FN1-218ENST00000473614 GCC2Q8IWJ2 1684 aa10.67□□□□□ -0.7
FN1-218ENST00000473614 ROCK1Q13464 1354 aa10.66□□□□□ -0.7
FN1-218ENST00000473614 CLSPNQ9HAW4 1339 aa10.66□□□□□ -0.7
FN1-218ENST00000473614 ARHGEF5Q12774 1597 aa10.66□□□□□ -0.7
FN1-218ENST00000473614 WDR7Q9Y4E6 1490 aa10.66□□□□□ -0.7
FN1-218ENST00000473614 ABCC5O15440 1437 aa10.66□□□□□ -0.7
FN1-218ENST00000473614 DAPK1P53355 1430 aa10.66□□□□□ -0.7
FN1-218ENST00000473614 RIMBP3CA6NJZ7 1639 aa10.66□□□□□ -0.7
FN1-218ENST00000473614 RIMBP3BA6NNM3 1639 aa10.66□□□□□ -0.7
FN1-218ENST00000473614 RIMBP3Q9UFD9 1639 aa10.66□□□□□ -0.7
FN1-218ENST00000473614 RAB3GAP2Q9H2M9 1393 aa10.65□□□□□ -0.7
FN1-218ENST00000473614 CFDP1Q9UEE9 299 aaPredicted RBP10.65□□□□□ -0.7
FN1-218ENST00000473614 NAIPQ13075 1403 aa10.65□□□□□ -0.7
FN1-218ENST00000473614 ABCA9Q8IUA7 1624 aa10.65□□□□□ -0.7
FN1-218ENST00000473614 ADGBQ8N7X0 1667 aa10.64□□□□□ -0.71
FN1-218ENST00000473614 SHANK2Q9UPX8 1470 aa10.64□□□□□ -0.71
FN1-218ENST00000473614 CCER1Q8TC90 406 aaPredicted RBP10.64□□□□□ -0.71
FN1-218ENST00000473614 SAMD9LQ8IVG5 1584 aa10.64□□□□□ -0.71
FN1-218ENST00000473614 DHX57Q6P158 1386 aaKnown RBP10.64□□□□□ -0.71
FN1-218ENST00000473614 ADGRL2O95490 1459 aa10.63□□□□□ -0.71
FN1-218ENST00000473614 ABCB7O75027 752 aa10.63□□□□□ -0.71
FN1-218ENST00000473614 ITGAEP38570 1179 aa10.63□□□□□ -0.71
FN1-218ENST00000473614 ZBTB12Q9Y330 459 aaPredicted RBP10.63□□□□□ -0.71
FN1-218ENST00000473614 PLCH2O75038 1416 aa10.63□□□□□ -0.71
FN1-218ENST00000473614 MBD5Q9P267 1494 aa10.62□□□□□ -0.71
FN1-218ENST00000473614 ZNF644Q9H582 1327 aaPredicted RBP10.62□□□□□ -0.71
FN1-218ENST00000473614 ASXL2Q76L83 1435 aa10.62□□□□□ -0.71
FN1-218ENST00000473614 KIAA1107Q9UPP5 1409 aa10.62□□□□□ -0.71
FN1-218ENST00000473614 PLEKHH2Q8IVE3 1493 aa10.61□□□□□ -0.71
FN1-218ENST00000473614 MAPKBP1O60336 1514 aa10.61□□□□□ -0.71
FN1-218ENST00000473614 ACIN1Q9UKV3 1341 aaKnown RBP10.6□□□□□ -0.71
FN1-218ENST00000473614 DSG3P32926 999 aa10.6□□□□□ -0.71
FN1-218ENST00000473614 MKRN4PQ13434 485 aaPredicted RBP10.6□□□□□ -0.71
FN1-218ENST00000473614 RSPH4AQ5TD94 716 aa10.6□□□□□ -0.71
FN1-218ENST00000473614 MAST1Q9Y2H9 1570 aa10.6□□□□□ -0.71
FN1-218ENST00000473614 NCOA1Q15788 1441 aa10.58□□□□□ -0.72
FN1-218ENST00000473614 ARHGAP5Q13017 1502 aa10.58□□□□□ -0.72
FN1-218ENST00000473614 CCDC141Q6ZP82 1450 aa10.57□□□□□ -0.72
FN1-218ENST00000473614 ABCC1P33527 1531 aa10.57□□□□□ -0.72
FN1-218ENST00000473614 KDM6BO15054 1643 aa10.56□□□□□ -0.72
FN1-218ENST00000473614 NPM1P06748 294 aaKnown RBP eCLIP10.56□□□□□ -0.72
FN1-218ENST00000473614 SYCP2Q9BX26 1530 aa10.56□□□□□ -0.72
FN1-218ENST00000473614 EFCAB2Q5VUJ9 269 aa10.55□□□□□ -0.72
FN1-218ENST00000473614 KCNH8Q96L42 1107 aa10.55□□□□□ -0.72
FN1-218ENST00000473614 C9orf84Q5VXU9 1444 aa10.55□□□□□ -0.72
FN1-218ENST00000473614 PLXNC1O60486 1568 aa10.55□□□□□ -0.72
FN1-218ENST00000473614 GLI2P10070 1586 aa10.55□□□□□ -0.72
FN1-218ENST00000473614 ANKRD30AQ9BXX3 1397 aa10.54□□□□□ -0.72
FN1-218ENST00000473614 ARHGEF12Q9NZN5 1544 aa10.54□□□□□ -0.72
FN1-218ENST00000473614 SPDYE4A6NLX3 237 aa10.54□□□□□ -0.72
FN1-218ENST00000473614 ZNF777Q9ULD5 760 aaPredicted RBP10.54□□□□□ -0.72
FN1-218ENST00000473614 CHIC2Q9UKJ5 165 aa10.53□□□□□ -0.72
FN1-218ENST00000473614 CFAP74Q9C0B2 1584 aa10.52□□□□□ -0.72
FN1-218ENST00000473614 MAP3K4Q9Y6R4 1608 aa10.52□□□□□ -0.73
FN1-218ENST00000473614 RRP7BPQ9NSQ0 103 aa10.52□□□□□ -0.73
FN1-218ENST00000473614 FANCAO15360 1455 aa10.52□□□□□ -0.73
FN1-218ENST00000473614 HNRNPMP52272 730 aaKnown RBP eCLIP10.51□□□□□ -0.73
FN1-218ENST00000473614 RTEL1-TNFRSF6BF6WH68 1400 aa10.5□□□□□ -0.73
FN1-218ENST00000473614 DENND4BO75064 1496 aaPredicted RBP10.5□□□□□ -0.73
FN1-218ENST00000473614 TSPY4P0CV99 314 aa10.5□□□□□ -0.73
FN1-218ENST00000473614 TSPY10P0CW01 314 aa10.5□□□□□ -0.73
FN1-218ENST00000473614 CYB5RLQ6IPT4 315 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms