RNA–Protein interactions for RNA: ENST00000472989.5

TM2D1-207, Transcript of TM2 domain containing 1, humanhuman

TSL 3

Gene TM2D1, Length 531 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-207ENST00000472989 MICALL2Q8IY33 904 aa11.34□□□□□ -0.59
TM2D1-207ENST00000472989 LSM11P83369 360 aaKnown RBP eCLIP11.33□□□□□ -0.6
TM2D1-207ENST00000472989 KHSRPQ92945 711 aaKnown RBP eCLIP11.32□□□□□ -0.62e-8■■■□□ 18.3
TM2D1-207ENST00000472989 ZNF316A6NFI3 1004 aaPredicted RBP11.3□□□□□ -0.6
TM2D1-207ENST00000472989 SOX12O15370 315 aa11.3□□□□□ -0.6
TM2D1-207ENST00000472989 MS4A4AQ96JQ5 239 aa11.29□□□□□ -0.6
TM2D1-207ENST00000472989 RNF25Q96BH1 459 aaPredicted RBP11.28□□□□□ -0.6
TM2D1-207ENST00000472989 RIOK3O14730 519 aaKnown RBP11.26□□□□□ -0.61
TM2D1-207ENST00000472989 HCSTQ9UBK5 93 aa11.25□□□□□ -0.61
TM2D1-207ENST00000472989 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.22□□□□□ -0.61
TM2D1-207ENST00000472989 VGFO15240 615 aaPredicted RBP11.22□□□□□ -0.61
TM2D1-207ENST00000472989 ZFP91Q96JP5 570 aaPredicted RBP11.22□□□□□ -0.61
TM2D1-207ENST00000472989 AXIN2Q9Y2T1 843 aa11.22□□□□□ -0.61
TM2D1-207ENST00000472989 PHF8Q9UPP1 1060 aa11.19□□□□□ -0.62
TM2D1-207ENST00000472989 PBX2P40425 430 aa11.16□□□□□ -0.62
TM2D1-207ENST00000472989 POTEEQ6S8J3 1075 aa11.15□□□□□ -0.62
TM2D1-207ENST00000472989 FBXO22Q8NEZ5 403 aa11.15□□□□□ -0.62
TM2D1-207ENST00000472989 NUDT7P0C024 238 aa11.14□□□□□ -0.63
TM2D1-207ENST00000472989 NISCHQ9Y2I1 1504 aa11.14□□□□□ -0.63
TM2D1-207ENST00000472989 NLRP6P59044 892 aa11.11□□□□□ -0.63
TM2D1-207ENST00000472989 LHX6Q9UPM6 363 aa11.11□□□□□ -0.63
TM2D1-207ENST00000472989 KIF3CO14782 793 aa11.08□□□□□ -0.64
TM2D1-207ENST00000472989 ADGRD1Q6QNK2 874 aa11.07□□□□□ -0.64
TM2D1-207ENST00000472989 MFRPQ9BY79 579 aa11.05□□□□□ -0.64
TM2D1-207ENST00000472989 BCL11BQ9C0K0 894 aaPredicted RBP11.05□□□□□ -0.64
TM2D1-207ENST00000472989 TAOK2Q9UL54 1235 aa11.05□□□□□ -0.64
TM2D1-207ENST00000472989 ARHGAP33O14559 1287 aa11.02□□□□□ -0.65
TM2D1-207ENST00000472989 SLC34A2O95436 690 aa11.01□□□□□ -0.65
TM2D1-207ENST00000472989 KCTD12Q96CX2 325 aaKnown RBP11.01□□□□□ -0.65
TM2D1-207ENST00000472989 PCDHGA4Q9Y5G9 962 aa11.01□□□□□ -0.65
TM2D1-207ENST00000472989 C2orf72A6NCS6 295 aa10.99□□□□□ -0.65
TM2D1-207ENST00000472989 IRX2Q9BZI1 471 aaPredicted RBP10.99□□□□□ -0.65
TM2D1-207ENST00000472989 STK24Q9Y6E0 443 aa10.97□□□□□ -0.65
TM2D1-207ENST00000472989 STAC3Q96MF2 364 aa10.96□□□□□ -0.65
TM2D1-207ENST00000472989 DMRTA1Q5VZB9 504 aa10.95□□□□□ -0.66
TM2D1-207ENST00000472989 HRO43593 1189 aa10.94□□□□□ -0.66
TM2D1-207ENST00000472989 PSEN2P49810 448 aa10.94□□□□□ -0.66
TM2D1-207ENST00000472989 TK2O00142 265 aa10.93□□□□□ -0.66
TM2D1-207ENST00000472989 STK25O00506 426 aa10.92□□□□□ -0.66
TM2D1-207ENST00000472989 PTPN5P54829 565 aa10.92□□□□□ -0.66
TM2D1-207ENST00000472989 PKD2Q13563 968 aa10.92□□□□□ -0.66
TM2D1-207ENST00000472989 ECM2O94769 699 aaPredicted RBP10.9□□□□□ -0.66
TM2D1-207ENST00000472989 RGS20O76081 388 aa10.89□□□□□ -0.67
TM2D1-207ENST00000472989 KDM4FA0A1W2PPD8 638 aa10.88□□□□□ -0.67
TM2D1-207ENST00000472989 PSDA5PKW4 1024 aaPredicted RBP10.88□□□□□ -0.67
TM2D1-207ENST00000472989 RGL2O15211 777 aa10.86□□□□□ -0.67
TM2D1-207ENST00000472989 TMC2Q8TDI7 906 aa10.85□□□□□ -0.67
TM2D1-207ENST00000472989 PTCD2Q8WV60 388 aaKnown RBP10.81□□□□□ -0.68
TM2D1-207ENST00000472989 PPP1R37O75864 691 aa10.79□□□□□ -0.68
TM2D1-207ENST00000472989 IFFO2Q5TF58 517 aa10.79□□□□□ -0.68
TM2D1-207ENST00000472989 A0A0G2JS52 829 aa10.78□□□□□ -0.68
TM2D1-207ENST00000472989 PPP4R3BQ5MIZ7 849 aa10.77□□□□□ -0.69
TM2D1-207ENST00000472989 KCNK17Q96T54 332 aa10.76□□□□□ -0.69
TM2D1-207ENST00000472989 FOXK1P85037 733 aa10.75□□□□□ -0.69
TM2D1-207ENST00000472989 Q6ZNB5 142 aa10.74□□□□□ -0.69
TM2D1-207ENST00000472989 KCNH8Q96L42 1107 aa10.74□□□□□ -0.69
TM2D1-207ENST00000472989 VPS9D1Q9Y2B5 631 aa10.73□□□□□ -0.69
TM2D1-207ENST00000472989 GPHNQ9NQX3 736 aaPredicted RBP10.71□□□□□ -0.69
TM2D1-207ENST00000472989 GOLGA8CPA6NN73 597 aa10.69□□□□□ -0.7
TM2D1-207ENST00000472989 THSD4Q6ZMP0 1018 aa10.69□□□□□ -0.7
TM2D1-207ENST00000472989 PLPP6Q8IY26 295 aa10.68□□□□□ -0.7
TM2D1-207ENST00000472989 HS6ST3Q8IZP7 471 aa10.66□□□□□ -0.7
TM2D1-207ENST00000472989 WNT2BQ93097 391 aa10.66□□□□□ -0.7
TM2D1-207ENST00000472989 TBC1D12O60347 775 aa10.65□□□□□ -0.7
TM2D1-207ENST00000472989 DSG2Q14126 1118 aa10.65□□□□□ -0.7
TM2D1-207ENST00000472989 BHMG1C9JSJ3 638 aaPredicted RBP10.61□□□□□ -0.71
TM2D1-207ENST00000472989 MRPL50Q8N5N7 158 aaKnown RBP10.6□□□□□ -0.71
TM2D1-207ENST00000472989 OXER1Q8TDS5 423 aa10.6□□□□□ -0.71
TM2D1-207ENST00000472989 SLC4A5Q9BY07 1137 aa10.6□□□□□ -0.71
TM2D1-207ENST00000472989 DNAJC5Q9H3Z4 198 aa10.6□□□□□ -0.71
TM2D1-207ENST00000472989 ZNF454Q8N9F8 522 aa10.57□□□□□ -0.72
TM2D1-207ENST00000472989 CRISPLD2Q9H0B8 497 aa10.55□□□□□ -0.72
TM2D1-207ENST00000472989 BCL2L12Q9HB09 334 aa10.55□□□□□ -0.72
TM2D1-207ENST00000472989 CHGAP10645 457 aaKnown RBP10.53□□□□□ -0.72
TM2D1-207ENST00000472989 NKX1-1Q15270 411 aaPredicted RBP10.52□□□□□ -0.73
TM2D1-207ENST00000472989 ZBED2Q9BTP6 218 aa10.52□□□□□ -0.73
TM2D1-207ENST00000472989 PTPREP23469 700 aa10.51□□□□□ -0.73
TM2D1-207ENST00000472989 FOSBP53539 338 aa10.5□□□□□ -0.73
TM2D1-207ENST00000472989 TRAF7Q6Q0C0 670 aa10.5□□□□□ -0.73
TM2D1-207ENST00000472989 ANO8Q9HCE9 1232 aaPredicted RBP10.49□□□□□ -0.73
TM2D1-207ENST00000472989 UPF1Q92900 1129 aaKnown RBP eCLIP10.48□□□□□ -0.73
TM2D1-207ENST00000472989 LCE2BO14633 110 aa10.47□□□□□ -0.73
TM2D1-207ENST00000472989 ITGBL1O95965 494 aaPredicted RBP10.47□□□□□ -0.73
TM2D1-207ENST00000472989 NBPF3Q9H094 633 aa10.47□□□□□ -0.73
TM2D1-207ENST00000472989 RYDENQ9NUL5 291 aaKnown RBP10.47□□□□□ -0.73
TM2D1-207ENST00000472989 PPP1R15BQ5SWA1 713 aa10.46□□□□□ -0.73
TM2D1-207ENST00000472989 JPH4Q96JJ6 628 aa10.46□□□□□ -0.73
TM2D1-207ENST00000472989 GFRA3O60609 400 aa10.45□□□□□ -0.74
TM2D1-207ENST00000472989 LAPTM4AQ15012 233 aa10.45□□□□□ -0.74
TM2D1-207ENST00000472989 NCKAP5LQ9HCH0 1330 aa10.44□□□□□ -0.74
TM2D1-207ENST00000472989 ANKK1Q8NFD2 765 aa10.42□□□□□ -0.74
TM2D1-207ENST00000472989 BCAMP50895 628 aa10.41□□□□□ -0.74
TM2D1-207ENST00000472989 KCNC4Q03721 635 aa10.41□□□□□ -0.74
TM2D1-207ENST00000472989 ZDHHC16Q969W1 377 aa10.38□□□□□ -0.75
TM2D1-207ENST00000472989 ADAM33Q9BZ11 813 aa10.38□□□□□ -0.75
TM2D1-207ENST00000472989 EVI5O60447 810 aa10.37□□□□□ -0.75
TM2D1-207ENST00000472989 PDE4AP27815 886 aa10.37□□□□□ -0.75
TM2D1-207ENST00000472989 MFSD10Q14728 455 aa10.35□□□□□ -0.75
TM2D1-207ENST00000472989 GTPBP6O43824 516 aaPredicted RBP10.34□□□□□ -0.75
TM2D1-207ENST00000472989 ZNF787Q6DD87 383 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms