RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 PLEKHD1A6NEE1 506 aa15.24■□□□□ 0.03
APTX-216ENST00000472896 RANGAP1P46060 587 aaPredicted RBP15.24■□□□□ 0.03
APTX-216ENST00000472896 MLECQ14165 292 aa15.24■□□□□ 0.03
APTX-216ENST00000472896 SAMD9Q5K651 1589 aa15.24■□□□□ 0.03
APTX-216ENST00000472896 RICTORQ6R327 1708 aa15.23■□□□□ 0.03
APTX-216ENST00000472896 YEATS2Q9ULM3 1422 aa15.23■□□□□ 0.03
APTX-216ENST00000472896 FANCAO15360 1455 aa15.2■□□□□ 0.02
APTX-216ENST00000472896 CSRNP3Q8WYN3 585 aa15.2■□□□□ 0.02
APTX-216ENST00000472896 POGZQ7Z3K3 1410 aa15.19■□□□□ 0.02
APTX-216ENST00000472896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.18■□□□□ 0.02
APTX-216ENST00000472896 CEBPAP49715 358 aaPredicted RBP15.17■□□□□ 0.02
APTX-216ENST00000472896 ZFYVE16Q7Z3T8 1539 aa15.16■□□□□ 0.02
APTX-216ENST00000472896 DIEXFQ68CQ4 756 aaKnown RBP15.16■□□□□ 0.02
APTX-216ENST00000472896 ZMYM4Q5VZL5 1548 aa15.16■□□□□ 0.02
APTX-216ENST00000472896 DISP3Q9P2K9 1392 aa15.15■□□□□ 0.02
APTX-216ENST00000472896 HECW1Q76N89 1606 aa15.14■□□□□ 0.01
APTX-216ENST00000472896 SOCS7O14512 581 aa15.13■□□□□ 0.01
APTX-216ENST00000472896 MAGI2Q86UL8 1455 aa15.13■□□□□ 0.01
APTX-216ENST00000472896 TTC37Q6PGP7 1564 aa15.13■□□□□ 0.01
APTX-216ENST00000472896 SCAPERQ9BY12 1400 aa15.13■□□□□ 0.01
APTX-216ENST00000472896 EFCAB5A4FU69 1503 aa15.13■□□□□ 0.01
APTX-216ENST00000472896 CFAP74Q9C0B2 1584 aa15.11■□□□□ 0.01
APTX-216ENST00000472896 FER1L4A9Z1Z3 1794 aa15.11■□□□□ 0.01
APTX-216ENST00000472896 ATP10AO60312 1499 aa15.1■□□□□ 0.01
APTX-216ENST00000472896 ARHGEF12Q9NZN5 1544 aa15.1■□□□□ 0.01
APTX-216ENST00000472896 PLCH2O75038 1416 aa15.09■□□□□ 0.01
APTX-216ENST00000472896 STRCQ7RTU9 1775 aa15.09■□□□□ 0.01
APTX-216ENST00000472896 DMRT2Q9Y5R5 561 aa15.07■□□□□ 0
APTX-216ENST00000472896 CDK13Q14004 1512 aaKnown RBP15.07■□□□□ 0
APTX-216ENST00000472896 C9orf84Q5VXU9 1444 aa15.05■□□□□ 0
APTX-216ENST00000472896 EFCAB2Q5VUJ9 269 aa15.05■□□□□ -0
APTX-216ENST00000472896 PREX1Q8TCU6 1659 aa15.05■□□□□ -0
APTX-216ENST00000472896 AFAP1Q8N556 730 aa15.04■□□□□ -0
APTX-216ENST00000472896 CCER1Q8TC90 406 aaPredicted RBP15.03■□□□□ -0
APTX-216ENST00000472896 ATP1B4Q9UN42 357 aaPredicted RBP15.01□□□□□ -0.01
APTX-216ENST00000472896 SETD1BQ9UPS6 1966 aaKnown RBP15.01□□□□□ -0.01
APTX-216ENST00000472896 UHRF1BP1Q6BDS2 1440 aa15□□□□□ -0.01
APTX-216ENST00000472896 PTPRTO14522 1441 aa14.99□□□□□ -0.01
APTX-216ENST00000472896 CLSPNQ9HAW4 1339 aa14.98□□□□□ -0.01
APTX-216ENST00000472896 MYT1LQ9UL68 1186 aa14.97□□□□□ -0.01
APTX-216ENST00000472896 LTBP4Q8N2S1 1624 aa14.96□□□□□ -0.01
APTX-216ENST00000472896 SPATA31D1Q6ZQQ2 1576 aa14.96□□□□□ -0.02
APTX-216ENST00000472896 EEA1Q15075 1411 aa14.95□□□□□ -0.02
APTX-216ENST00000472896 KIF14Q15058 1648 aa14.95□□□□□ -0.02
APTX-216ENST00000472896 ZNF518AQ6AHZ1 1483 aa14.95□□□□□ -0.02
APTX-216ENST00000472896 EHMT2Q96KQ7 1210 aa14.94□□□□□ -0.02
APTX-216ENST00000472896 MYO5CQ9NQX4 1742 aa14.94□□□□□ -0.02
APTX-216ENST00000472896 KDM5CP41229 1560 aa14.93□□□□□ -0.02
APTX-216ENST00000472896 DIP2CQ9Y2E4 1556 aa14.93□□□□□ -0.02
APTX-216ENST00000472896 C3P01024 1663 aa14.93□□□□□ -0.02
APTX-216ENST00000472896 ZNF316A6NFI3 1004 aaPredicted RBP14.92□□□□□ -0.02
APTX-216ENST00000472896 CDK11AQ9UQ88 783 aaPredicted RBP14.92□□□□□ -0.02
APTX-216ENST00000472896 TRAPPC8Q9Y2L5 1435 aa14.92□□□□□ -0.02
APTX-216ENST00000472896 ARHGAP5Q13017 1502 aa14.91□□□□□ -0.02
APTX-216ENST00000472896 TROQ12816 1431 aaPredicted RBP14.9□□□□□ -0.02
APTX-216ENST00000472896 NCOA1Q15788 1441 aa14.9□□□□□ -0.02
APTX-216ENST00000472896 ESF1Q9H501 851 aaKnown RBP14.9□□□□□ -0.02
APTX-216ENST00000472896 MLH3Q9UHC1 1453 aa14.9□□□□□ -0.02
APTX-216ENST00000472896 ABCA6Q8N139 1617 aa14.89□□□□□ -0.03
APTX-216ENST00000472896 NCKAP5LQ9HCH0 1330 aa14.89□□□□□ -0.03
APTX-216ENST00000472896 REREQ9P2R6 1566 aa14.89□□□□□ -0.03
APTX-216ENST00000472896 UBTFP17480 764 aaKnown RBP14.88□□□□□ -0.03
APTX-216ENST00000472896 AGLP35573 1532 aa14.88□□□□□ -0.03
APTX-216ENST00000472896 FMN1Q68DA7 1419 aa14.87□□□□□ -0.03
APTX-216ENST00000472896 ARHGAP35Q9NRY4 1499 aa14.87□□□□□ -0.03
APTX-216ENST00000472896 IQSEC2Q5JU85 1478 aa14.86□□□□□ -0.03
APTX-216ENST00000472896 ZNF335Q9H4Z2 1342 aaPredicted RBP14.86□□□□□ -0.03
APTX-216ENST00000472896 CDC42BPBQ9Y5S2 1711 aa14.86□□□□□ -0.03
APTX-216ENST00000472896 MSH5O43196 834 aa14.85□□□□□ -0.03
APTX-216ENST00000472896 UBAP1LF5GYI3 381 aa14.85□□□□□ -0.03
APTX-216ENST00000472896 CAMSAP1Q5T5Y3 1602 aa14.83□□□□□ -0.03
APTX-216ENST00000472896 CLIP1P30622 1438 aa14.83□□□□□ -0.04
APTX-216ENST00000472896 ZMYM3Q14202 1370 aa14.83□□□□□ -0.04
APTX-216ENST00000472896 ANP32EQ9BTT0 268 aa14.83□□□□□ -0.04
APTX-216ENST00000472896 LRRIQ1Q96JM4 1722 aa14.82□□□□□ -0.04
APTX-216ENST00000472896 KIDINS220Q9ULH0 1771 aa14.82□□□□□ -0.04
APTX-216ENST00000472896 CNTLNQ9NXG0 1405 aa14.81□□□□□ -0.04
APTX-216ENST00000472896 SLC24A1O60721 1099 aa14.81□□□□□ -0.04
APTX-216ENST00000472896 BCL11AQ9H165 835 aa14.81□□□□□ -0.04
APTX-216ENST00000472896 ABCC1P33527 1531 aa14.81□□□□□ -0.04
APTX-216ENST00000472896 NPATQ14207 1427 aa14.79□□□□□ -0.04
APTX-216ENST00000472896 ITSN2Q9NZM3 1697 aa14.78□□□□□ -0.04
APTX-216ENST00000472896 ZNF777Q9ULD5 760 aaPredicted RBP14.78□□□□□ -0.04
APTX-216ENST00000472896 PREX2Q70Z35 1606 aa14.77□□□□□ -0.04
APTX-216ENST00000472896 HNRNPMP52272 730 aaKnown RBP eCLIP14.77□□□□□ -0.05
APTX-216ENST00000472896 PKD2Q13563 968 aa14.77□□□□□ -0.05
APTX-216ENST00000472896 SAMD9LQ8IVG5 1584 aa14.75□□□□□ -0.05
APTX-216ENST00000472896 SPAG9O60271 1321 aaKnown RBP14.75□□□□□ -0.05
APTX-216ENST00000472896 MROH2AA6NES4 1674 aa14.74□□□□□ -0.05
APTX-216ENST00000472896 HSPA1LP34931 641 aa14.74□□□□□ -0.05
APTX-216ENST00000472896 PTPRKQ15262 1439 aa14.74□□□□□ -0.05
APTX-216ENST00000472896 TCOF1Q13428 1488 aaKnown RBP14.73□□□□□ -0.05
APTX-216ENST00000472896 CDC42BPAQ5VT25 1732 aa14.73□□□□□ -0.05
APTX-216ENST00000472896 SUPT6HQ7KZ85 1726 aaKnown RBP14.73□□□□□ -0.05
APTX-216ENST00000472896 GGT6Q6P531 493 aa14.72□□□□□ -0.05
APTX-216ENST00000472896 YTHDC1Q96MU7 727 aaKnown RBP14.72□□□□□ -0.05
APTX-216ENST00000472896 PLA2R1Q13018 1463 aa14.72□□□□□ -0.05
APTX-216ENST00000472896 PIP4K2BP78356 416 aa14.71□□□□□ -0.05
APTX-216ENST00000472896 PPP6R1Q9UPN7 881 aa14.71□□□□□ -0.05
APTX-216ENST00000472896 CLTCQ00610 1675 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms