RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, humanhuman

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-223ENST00000472807 CCDC18Q5T9S5 1454 aa14.52□□□□□ -0.08
CHEK2-223ENST00000472807 CASKIN1Q8WXD9 1431 aa14.52□□□□□ -0.08
CHEK2-223ENST00000472807 ZMYM4Q5VZL5 1548 aa14.51□□□□□ -0.09
CHEK2-223ENST00000472807 FYCO1Q9BQS8 1478 aa14.5□□□□□ -0.09
CHEK2-223ENST00000472807 ARID4BQ4LE39 1312 aaPredicted RBP14.49□□□□□ -0.09
CHEK2-223ENST00000472807 ZFYVE16Q7Z3T8 1539 aa14.49□□□□□ -0.09
CHEK2-223ENST00000472807 POGZQ7Z3K3 1410 aa14.49□□□□□ -0.09
CHEK2-223ENST00000472807 ADAMTSL3P82987 1691 aa14.49□□□□□ -0.09
CHEK2-223ENST00000472807 BCORL1Q5H9F3 1711 aa14.48□□□□□ -0.09
CHEK2-223ENST00000472807 SCAPERQ9BY12 1400 aa14.48□□□□□ -0.09
CHEK2-223ENST00000472807 HECW2Q9P2P5 1572 aa14.47□□□□□ -0.09
CHEK2-223ENST00000472807 ARHGAP5Q13017 1502 aa14.47□□□□□ -0.09
CHEK2-223ENST00000472807 MAGI2Q86UL8 1455 aa14.47□□□□□ -0.09
CHEK2-223ENST00000472807 EFCAB2Q5VUJ9 269 aa14.47□□□□□ -0.09
CHEK2-223ENST00000472807 MADDQ8WXG6 1647 aa14.44□□□□□ -0.1
CHEK2-223ENST00000472807 PTPRMP28827 1452 aa14.44□□□□□ -0.1
CHEK2-223ENST00000472807 YEATS2Q9ULM3 1422 aa14.44□□□□□ -0.1
CHEK2-223ENST00000472807 PREX2Q70Z35 1606 aa14.43□□□□□ -0.1
CHEK2-223ENST00000472807 ZNF518AQ6AHZ1 1483 aa14.43□□□□□ -0.1
CHEK2-223ENST00000472807 CDC42BPBQ9Y5S2 1711 aa14.41□□□□□ -0.1
CHEK2-223ENST00000472807 ADRA2BP18089 450 aa14.4□□□□□ -0.1
CHEK2-223ENST00000472807 RIMS1Q86UR5 1692 aaKnown RBP14.39□□□□□ -0.11
CHEK2-223ENST00000472807 KDM5CP41229 1560 aa14.39□□□□□ -0.11
CHEK2-223ENST00000472807 C9orf84Q5VXU9 1444 aa14.39□□□□□ -0.11
CHEK2-223ENST00000472807 SIGLEC1Q9BZZ2 1709 aa14.38□□□□□ -0.11
CHEK2-223ENST00000472807 CDC42BPAQ5VT25 1732 aa14.38□□□□□ -0.11
CHEK2-223ENST00000472807 ATP10AO60312 1499 aa14.38□□□□□ -0.11
CHEK2-223ENST00000472807 ABCC1P33527 1531 aa14.37□□□□□ -0.11
CHEK2-223ENST00000472807 PPP6R1Q9UPN7 881 aa14.37□□□□□ -0.11
CHEK2-223ENST00000472807 CEP162Q5TB80 1403 aa14.36□□□□□ -0.11
CHEK2-223ENST00000472807 ITSN2Q9NZM3 1697 aa14.36□□□□□ -0.11
CHEK2-223ENST00000472807 FER1L4A9Z1Z3 1794 aa14.35□□□□□ -0.11
CHEK2-223ENST00000472807 AFAP1Q8N556 730 aa14.34□□□□□ -0.11
CHEK2-223ENST00000472807 MYT1LQ9UL68 1186 aa14.34□□□□□ -0.11
CHEK2-223ENST00000472807 MLECQ14165 292 aa14.33□□□□□ -0.12
CHEK2-223ENST00000472807 DIP2CQ9Y2E4 1556 aa14.33□□□□□ -0.12
CHEK2-223ENST00000472807 MTUS2Q5JR59 1369 aa14.33□□□□□ -0.12
CHEK2-223ENST00000472807 MLH3Q9UHC1 1453 aa14.32□□□□□ -0.12
CHEK2-223ENST00000472807 TRAPPC8Q9Y2L5 1435 aa14.32□□□□□ -0.12
CHEK2-223ENST00000472807 ARHGEF12Q9NZN5 1544 aa14.31□□□□□ -0.12
CHEK2-223ENST00000472807 GPATCH8Q9UKJ3 1502 aaKnown RBP14.31□□□□□ -0.12
CHEK2-223ENST00000472807 REREQ9P2R6 1566 aa14.31□□□□□ -0.12
CHEK2-223ENST00000472807 ABCA6Q8N139 1617 aa14.31□□□□□ -0.12
CHEK2-223ENST00000472807 CCNB3Q8WWL7 1395 aa14.31□□□□□ -0.12
CHEK2-223ENST00000472807 EHBP1L1Q8N3D4 1523 aa14.31□□□□□ -0.12
CHEK2-223ENST00000472807 SAMD9LQ8IVG5 1584 aa14.3□□□□□ -0.12
CHEK2-223ENST00000472807 ZNF777Q9ULD5 760 aaPredicted RBP14.3□□□□□ -0.12
CHEK2-223ENST00000472807 LMTK3Q96Q04 1460 aa14.3□□□□□ -0.12
CHEK2-223ENST00000472807 SYCP2Q9BX26 1530 aa14.3□□□□□ -0.12
CHEK2-223ENST00000472807 PLEKHH2Q8IVE3 1493 aa14.28□□□□□ -0.12
CHEK2-223ENST00000472807 CFDP1Q9UEE9 299 aaPredicted RBP14.27□□□□□ -0.13
CHEK2-223ENST00000472807 KIDINS220Q9ULH0 1771 aa14.27□□□□□ -0.13
CHEK2-223ENST00000472807 TIAM1Q13009 1591 aa14.26□□□□□ -0.13
CHEK2-223ENST00000472807 AGLP35573 1532 aa14.25□□□□□ -0.13
CHEK2-223ENST00000472807 KIAA1107Q9UPP5 1409 aa14.25□□□□□ -0.13
CHEK2-223ENST00000472807 SPAG9O60271 1321 aaKnown RBP14.23□□□□□ -0.13
CHEK2-223ENST00000472807 INO80Q9ULG1 1556 aaPredicted RBP14.22□□□□□ -0.13
CHEK2-223ENST00000472807 ATP7AQ04656 1500 aa14.22□□□□□ -0.13
CHEK2-223ENST00000472807 HNRNPMP52272 730 aaKnown RBP eCLIP14.22□□□□□ -0.13
CHEK2-223ENST00000472807 SUPT6HQ7KZ85 1726 aaKnown RBP14.21□□□□□ -0.13
CHEK2-223ENST00000472807 PREX1Q8TCU6 1659 aa14.21□□□□□ -0.13
CHEK2-223ENST00000472807 ESF1Q9H501 851 aaKnown RBP14.21□□□□□ -0.13
CHEK2-223ENST00000472807 VPS8Q8N3P4 1428 aa14.21□□□□□ -0.13
CHEK2-223ENST00000472807 LOC105371045A0A1W2PR82 267 aa14.19□□□□□ -0.14
CHEK2-223ENST00000472807 ILDR1Q86SU0 546 aaPredicted RBP14.19□□□□□ -0.14
CHEK2-223ENST00000472807 NCOA2Q15596 1464 aa14.18□□□□□ -0.14
CHEK2-223ENST00000472807 CNTLNQ9NXG0 1405 aa14.18□□□□□ -0.14
CHEK2-223ENST00000472807 CEBPAP49715 358 aaPredicted RBP14.18□□□□□ -0.14
CHEK2-223ENST00000472807 HSPA2P54652 639 aa14.18□□□□□ -0.14
CHEK2-223ENST00000472807 C3P01024 1663 aa14.17□□□□□ -0.14
CHEK2-223ENST00000472807 PLXNC1O60486 1568 aa14.17□□□□□ -0.14
CHEK2-223ENST00000472807 SETD1BQ9UPS6 1966 aaKnown RBP14.16□□□□□ -0.14
CHEK2-223ENST00000472807 A2MP01023 1474 aa14.16□□□□□ -0.14
CHEK2-223ENST00000472807 ZNF644Q9H582 1327 aaPredicted RBP14.15□□□□□ -0.14
CHEK2-223ENST00000472807 UHRF1BP1Q6BDS2 1440 aa14.15□□□□□ -0.14
CHEK2-223ENST00000472807 ADGBQ8N7X0 1667 aa14.15□□□□□ -0.14
CHEK2-223ENST00000472807 MBD5Q9P267 1494 aa14.15□□□□□ -0.14
CHEK2-223ENST00000472807 CAMSAP2Q08AD1 1489 aa14.14□□□□□ -0.15
CHEK2-223ENST00000472807 LRRC9Q6ZRR7 1453 aa14.14□□□□□ -0.15
CHEK2-223ENST00000472807 MROH2AA6NES4 1674 aa14.14□□□□□ -0.15
CHEK2-223ENST00000472807 CCDC141Q6ZP82 1450 aa14.13□□□□□ -0.15
CHEK2-223ENST00000472807 RTEL1-TNFRSF6BF6WH68 1400 aa14.13□□□□□ -0.15
CHEK2-223ENST00000472807 MAP3K1Q13233 1512 aa14.12□□□□□ -0.15
CHEK2-223ENST00000472807 CLTCQ00610 1675 aaKnown RBP14.1□□□□□ -0.15
CHEK2-223ENST00000472807 RSPH4AQ5TD94 716 aa14.09□□□□□ -0.15
CHEK2-223ENST00000472807 ARHGEF5Q12774 1597 aa14.09□□□□□ -0.15
CHEK2-223ENST00000472807 NPATQ14207 1427 aa14.08□□□□□ -0.15
CHEK2-223ENST00000472807 ZMYM3Q14202 1370 aa14.08□□□□□ -0.16
CHEK2-223ENST00000472807 GGT6Q6P531 493 aa14.07□□□□□ -0.16
CHEK2-223ENST00000472807 FBXO41Q8TF61 875 aa14.07□□□□□ -0.16
CHEK2-223ENST00000472807 DHX29Q7Z478 1369 aaKnown RBP14.07□□□□□ -0.16
CHEK2-223ENST00000472807 STRCQ7RTU9 1775 aa14.06□□□□□ -0.16
CHEK2-223ENST00000472807 KANK4Q5T7N3 995 aaPredicted RBP14.05□□□□□ -0.16
CHEK2-223ENST00000472807 DMRT2Q9Y5R5 561 aa14.05□□□□□ -0.16
CHEK2-223ENST00000472807 MYOM3Q5VTT5 1437 aa14.05□□□□□ -0.16
CHEK2-223ENST00000472807 TSPY4P0CV99 314 aa14.04□□□□□ -0.16
CHEK2-223ENST00000472807 TSPY10P0CW01 314 aa14.04□□□□□ -0.16
CHEK2-223ENST00000472807 APLP2Q06481 763 aa14.04□□□□□ -0.16
CHEK2-223ENST00000472807 MIA2Q96PC5 1412 aa14.04□□□□□ -0.16
CHEK2-223ENST00000472807 FAM135AQ9P2D6 1515 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms