RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, humanhuman

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-223ENST00000472807 NISCHQ9Y2I1 1504 aa22.14■■□□□ 1.13
CHEK2-223ENST00000472807 CCDC180Q9P1Z9 1646 aa19.84■□□□□ 0.77
CHEK2-223ENST00000472807 ABCC9O60706 1549 aa19.66■□□□□ 0.74
CHEK2-223ENST00000472807 AEBP2Q6ZN18 517 aaPredicted RBP19.53■□□□□ 0.72
CHEK2-223ENST00000472807 RB1CC1Q8TDY2 1594 aa18.82■□□□□ 0.6
CHEK2-223ENST00000472807 NACADO15069 1562 aa18.72■□□□□ 0.59
CHEK2-223ENST00000472807 DCAF8L2P0C7V8 631 aa18.6■□□□□ 0.57
CHEK2-223ENST00000472807 MYO15BQ96JP2 1530 aa18.5■□□□□ 0.55
CHEK2-223ENST00000472807 ZCCHC6Q5VYS8 1495 aaKnown RBP18.39■□□□□ 0.54
CHEK2-223ENST00000472807 CHIC1Q5VXU3 224 aa18.39■□□□□ 0.53
CHEK2-223ENST00000472807 UNC13AQ9UPW8 1703 aa18.37■□□□□ 0.53
CHEK2-223ENST00000472807 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
CHEK2-223ENST00000472807 DCAF1Q9Y4B6 1507 aa18.31■□□□□ 0.52
CHEK2-223ENST00000472807 DNAJC5BQ9UF47 199 aa18.25■□□□□ 0.51
CHEK2-223ENST00000472807 BICRAQ9NZM4 1560 aa18.22■□□□□ 0.51
CHEK2-223ENST00000472807 SCRIBQ14160 1630 aa18.08■□□□□ 0.48
CHEK2-223ENST00000472807 SHROOM4Q9ULL8 1493 aa18.07■□□□□ 0.48
CHEK2-223ENST00000472807 EIF4G1Q04637 1599 aaKnown RBP17.79■□□□□ 0.44
CHEK2-223ENST00000472807 CC2D2AQ9P2K1 1620 aa17.78■□□□□ 0.44
CHEK2-223ENST00000472807 CECR2Q9BXF3 1484 aa17.72■□□□□ 0.43
CHEK2-223ENST00000472807 SMARCA4P51532 1647 aa17.25■□□□□ 0.35
CHEK2-223ENST00000472807 NCAPD3P42695 1498 aa17.24■□□□□ 0.35
CHEK2-223ENST00000472807 ATAD2BQ9ULI0 1458 aa17.22■□□□□ 0.35
CHEK2-223ENST00000472807 SMARCA2P51531 1590 aa17.21■□□□□ 0.35
CHEK2-223ENST00000472807 BAZ1AQ9NRL2 1556 aaPredicted RBP17.19■□□□□ 0.34
CHEK2-223ENST00000472807 HMGXB3Q12766 1538 aa17.17■□□□□ 0.34
CHEK2-223ENST00000472807 BAZ1BQ9UIG0 1483 aaKnown RBP17.09■□□□□ 0.33
CHEK2-223ENST00000472807 PEG3Q9GZU2 1588 aa17.09■□□□□ 0.33
CHEK2-223ENST00000472807 MROH2BQ7Z745 1585 aa17.04■□□□□ 0.32
CHEK2-223ENST00000472807 ERCC6Q03468 1493 aa17.02■□□□□ 0.32
CHEK2-223ENST00000472807 CUX2O14529 1486 aa16.93■□□□□ 0.3
CHEK2-223ENST00000472807 NESP48681 1621 aa16.92■□□□□ 0.3
CHEK2-223ENST00000472807 LAMC3Q9Y6N6 1575 aa16.87■□□□□ 0.29
CHEK2-223ENST00000472807 WIZO95785 1651 aa16.85■□□□□ 0.29
CHEK2-223ENST00000472807 SENP3Q9H4L4 574 aaPredicted RBP16.81■□□□□ 0.28
CHEK2-223ENST00000472807 PDS5BQ9NTI5 1447 aa16.77■□□□□ 0.27
CHEK2-223ENST00000472807 THOC2Q8NI27 1593 aaKnown RBP16.76■□□□□ 0.27
CHEK2-223ENST00000472807 KIF21AQ7Z4S6 1674 aa16.75■□□□□ 0.27
CHEK2-223ENST00000472807 RSF1Q96T23 1441 aaPredicted RBP16.74■□□□□ 0.27
CHEK2-223ENST00000472807 CADPSQ9ULU8 1353 aa16.73■□□□□ 0.27
CHEK2-223ENST00000472807 DNAJC5Q9H3Z4 198 aa16.7■□□□□ 0.26
CHEK2-223ENST00000472807 TOP2AP11388 1531 aaKnown RBP16.68■□□□□ 0.26
CHEK2-223ENST00000472807 MRC2Q9UBG0 1479 aa16.61■□□□□ 0.25
CHEK2-223ENST00000472807 CFTRP13569 1480 aa16.58■□□□□ 0.24
CHEK2-223ENST00000472807 CEP164Q9UPV0 1460 aa16.58■□□□□ 0.24
CHEK2-223ENST00000472807 WDR62O43379 1518 aa16.57■□□□□ 0.24
CHEK2-223ENST00000472807 FANCD2Q9BXW9 1451 aa16.56■□□□□ 0.24
CHEK2-223ENST00000472807 PHF23Q9BUL5 403 aaPredicted RBP16.51■□□□□ 0.23
CHEK2-223ENST00000472807 PRDM2Q13029 1718 aa16.47■□□□□ 0.23
CHEK2-223ENST00000472807 CCDC88BA6NC98 1476 aa16.46■□□□□ 0.23
CHEK2-223ENST00000472807 URB2Q14146 1524 aaKnown RBP16.4■□□□□ 0.22
CHEK2-223ENST00000472807 TOPBP1Q92547 1522 aa16.25■□□□□ 0.19
CHEK2-223ENST00000472807 ABCC8Q09428 1581 aa16.25■□□□□ 0.19
CHEK2-223ENST00000472807 IFT140Q96RY7 1462 aa16.24■□□□□ 0.19
CHEK2-223ENST00000472807 DNMBPQ6XZF7 1577 aa16.23■□□□□ 0.19
CHEK2-223ENST00000472807 ZNF608Q9ULD9 1512 aaPredicted RBP16.17■□□□□ 0.18
CHEK2-223ENST00000472807 OSCARQ8IYS5 282 aa16.14■□□□□ 0.17
CHEK2-223ENST00000472807 EIF4G3O43432 1585 aaKnown RBP16.13■□□□□ 0.17
CHEK2-223ENST00000472807 TARBP1Q13395 1621 aaKnown RBP16.1■□□□□ 0.17
CHEK2-223ENST00000472807 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
CHEK2-223ENST00000472807 SUPT5HO00267 1087 aaKnown RBP16.09■□□□□ 0.17
CHEK2-223ENST00000472807 TRIM41Q8WV44 630 aa16.05■□□□□ 0.16
CHEK2-223ENST00000472807 AQRO60306 1485 aaKnown RBP eCLIP16.03■□□□□ 0.16
CHEK2-223ENST00000472807 CUX1P39880 1505 aa16.02■□□□□ 0.15
CHEK2-223ENST00000472807 FGD5Q6ZNL6 1462 aa16.02■□□□□ 0.15
CHEK2-223ENST00000472807 RAD54L2Q9Y4B4 1467 aa16.02■□□□□ 0.15
CHEK2-223ENST00000472807 SOGA1O94964 1423 aa16.02■□□□□ 0.15
CHEK2-223ENST00000472807 WDR97A6NE52 1622 aa15.99■□□□□ 0.15
CHEK2-223ENST00000472807 CHD1O14646 1710 aa15.97■□□□□ 0.15
CHEK2-223ENST00000472807 TDRD9Q8NDG6 1382 aaKnown RBP15.96■□□□□ 0.15
CHEK2-223ENST00000472807 RIMBP3CA6NJZ7 1639 aa15.94■□□□□ 0.14
CHEK2-223ENST00000472807 RIMBP3BA6NNM3 1639 aa15.94■□□□□ 0.14
CHEK2-223ENST00000472807 RIMBP3Q9UFD9 1639 aa15.94■□□□□ 0.14
CHEK2-223ENST00000472807 FBLN2P98095 1184 aa15.91■□□□□ 0.14
CHEK2-223ENST00000472807 SNAPC4Q5SXM2 1469 aa15.91■□□□□ 0.14
CHEK2-223ENST00000472807 ARHGEF11O15085 1522 aa15.9■□□□□ 0.14
CHEK2-223ENST00000472807 MAGI1Q96QZ7 1491 aaPredicted RBP15.89■□□□□ 0.13
CHEK2-223ENST00000472807 GRIN2BQ13224 1484 aa15.88■□□□□ 0.13
CHEK2-223ENST00000472807 ABCA10Q8WWZ4 1543 aa15.85■□□□□ 0.13
CHEK2-223ENST00000472807 PBRM1Q86U86 1689 aa15.85■□□□□ 0.13
CHEK2-223ENST00000472807 GAPVD1Q14C86 1478 aa15.84■□□□□ 0.13
CHEK2-223ENST00000472807 WRNQ14191 1432 aaPredicted RBP eCLIP15.83■□□□□ 0.12
CHEK2-223ENST00000472807 SYNJ2O15056 1496 aa15.83■□□□□ 0.12
CHEK2-223ENST00000472807 ABCA5Q8WWZ7 1642 aa15.83■□□□□ 0.12
CHEK2-223ENST00000472807 CHMP7Q8WUX9 453 aaPredicted RBP15.82■□□□□ 0.12
CHEK2-223ENST00000472807 SYNJ1O43426 1573 aa15.82■□□□□ 0.12
CHEK2-223ENST00000472807 TOP2BQ02880 1626 aa15.82■□□□□ 0.12
CHEK2-223ENST00000472807 BIVM-ERCC5R4GMW8 1640 aa15.82■□□□□ 0.12
CHEK2-223ENST00000472807 CLASP1Q7Z460 1538 aa15.78■□□□□ 0.12
CHEK2-223ENST00000472807 ARAP1Q96P48 1450 aa15.75■□□□□ 0.11
CHEK2-223ENST00000472807 CYB5RLQ6IPT4 315 aa15.74■□□□□ 0.11
CHEK2-223ENST00000472807 ADAMTS12P58397 1594 aa15.7■□□□□ 0.1
CHEK2-223ENST00000472807 GRIN2AQ12879 1464 aa15.68■□□□□ 0.1
CHEK2-223ENST00000472807 ERICH3Q5RHP9 1530 aa15.67■□□□□ 0.1
CHEK2-223ENST00000472807 FHAD1B1AJZ9 1412 aa15.65■□□□□ 0.1
CHEK2-223ENST00000472807 FOXD1Q16676 465 aa15.64■□□□□ 0.09
CHEK2-223ENST00000472807 NUP160Q12769 1436 aa15.61■□□□□ 0.09
CHEK2-223ENST00000472807 CEP170Q5SW79 1584 aa15.61■□□□□ 0.09
CHEK2-223ENST00000472807 TRHP20396 242 aaPredicted RBP15.55■□□□□ 0.08
CHEK2-223ENST00000472807 SHROOM2Q13796 1616 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms