RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 NPHP1O15259 732 aa16.16■□□□□ 0.18
IRF1-208ENST00000472045 NEUROD2Q15784 382 aa16.16■□□□□ 0.18
IRF1-208ENST00000472045 CC2D1BQ5T0F9 858 aaKnown RBP16.16■□□□□ 0.18
IRF1-208ENST00000472045 HDGFL2Q7Z4V5 671 aaPredicted RBP16.16■□□□□ 0.18
IRF1-208ENST00000472045 LAS1LQ9Y4W2 734 aaKnown RBP16.16■□□□□ 0.18
IRF1-208ENST00000472045 RUSC2Q8N2Y8 1516 aa16.15■□□□□ 0.18
IRF1-208ENST00000472045 HSP90AA1P07900 732 aaKnown RBP16.15■□□□□ 0.18
IRF1-208ENST00000472045 CFTRP13569 1480 aa16.13■□□□□ 0.17
IRF1-208ENST00000472045 ANP32AP39687 249 aaKnown RBP16.13■□□□□ 0.17
IRF1-208ENST00000472045 TIMELESSQ9UNS1 1208 aa16.13■□□□□ 0.17
IRF1-208ENST00000472045 CCDC136Q96JN2 1154 aa16.13■□□□□ 0.17
IRF1-208ENST00000472045 NUTM2DQ5VT03 806 aaPredicted RBP16.12■□□□□ 0.17
IRF1-208ENST00000472045 PNNQ9H307 717 aaKnown RBP16.12■□□□□ 0.17
IRF1-208ENST00000472045 IFT140Q96RY7 1462 aa16.12■□□□□ 0.17
IRF1-208ENST00000472045 MORC1Q86VD1 984 aa16.11■□□□□ 0.17
IRF1-208ENST00000472045 HMGXB3Q12766 1538 aa16.1■□□□□ 0.17
IRF1-208ENST00000472045 CSB-PGBD3P0DP91 1061 aa16.09■□□□□ 0.17
IRF1-208ENST00000472045 MIER1Q8N108 512 aa16.09■□□□□ 0.17
IRF1-208ENST00000472045 ROCK2O75116 1388 aaKnown RBP16.09■□□□□ 0.17
IRF1-208ENST00000472045 RAB3GAP2Q9H2M9 1393 aa16.08■□□□□ 0.16
IRF1-208ENST00000472045 SENP3-EIF4A1A0A087X0R7 540 aa16.07■□□□□ 0.16
IRF1-208ENST00000472045 DNAJC5BQ9UF47 199 aa16.07■□□□□ 0.16
IRF1-208ENST00000472045 EIF3AQ14152 1382 aaKnown RBP16.06■□□□□ 0.16
IRF1-208ENST00000472045 CCDC9Q9Y3X0 531 aaKnown RBP16.06■□□□□ 0.16
IRF1-208ENST00000472045 PRG4Q92954 1404 aaPredicted RBP16.04■□□□□ 0.16
IRF1-208ENST00000472045 NGDNQ8NEJ9 315 aaKnown RBP16.03■□□□□ 0.16
IRF1-208ENST00000472045 FTSJ3Q8IY81 847 aaKnown RBP16.03■□□□□ 0.16
IRF1-208ENST00000472045 HSPA5P11021 654 aaKnown RBP16.01■□□□□ 0.15
IRF1-208ENST00000472045 TOPBP1Q92547 1522 aa16■□□□□ 0.15
IRF1-208ENST00000472045 RTF1Q92541 710 aaKnown RBP15.99■□□□□ 0.15
IRF1-208ENST00000472045 TERF2IPQ9NYB0 399 aa15.99■□□□□ 0.15
IRF1-208ENST00000472045 PRDM2Q13029 1718 aa15.98■□□□□ 0.15
IRF1-208ENST00000472045 NUTM2FA1L443 756 aa15.98■□□□□ 0.15
IRF1-208ENST00000472045 VGFO15240 615 aaPredicted RBP15.98■□□□□ 0.15
IRF1-208ENST00000472045 CCDC144AA2RUR9 1427 aa15.97■□□□□ 0.15
IRF1-208ENST00000472045 IRX6P78412 446 aaPredicted RBP15.97■□□□□ 0.15
IRF1-208ENST00000472045 UACAQ9BZF9 1416 aa15.96■□□□□ 0.15
IRF1-208ENST00000472045 SNAPC4Q5SXM2 1469 aa15.96■□□□□ 0.15
IRF1-208ENST00000472045 SYNJ2O15056 1496 aa15.95■□□□□ 0.14
IRF1-208ENST00000472045 TRAK1Q9UPV9 953 aa15.95■□□□□ 0.14
IRF1-208ENST00000472045 POLA1P09884 1462 aaPredicted RBP15.94■□□□□ 0.14
IRF1-208ENST00000472045 L3MBTL2Q969R5 705 aa15.93■□□□□ 0.14
IRF1-208ENST00000472045 KTN1Q86UP2 1357 aaKnown RBP15.93■□□□□ 0.14
IRF1-208ENST00000472045 MYOM3Q5VTT5 1437 aa15.92■□□□□ 0.14
IRF1-208ENST00000472045 FRAT1Q92837 279 aaPredicted RBP15.92■□□□□ 0.14
IRF1-208ENST00000472045 CHMP4BQ9H444 224 aaKnown RBP15.91■□□□□ 0.14
IRF1-208ENST00000472045 BICRAQ9NZM4 1560 aa15.9■□□□□ 0.14
IRF1-208ENST00000472045 OS9Q13438 667 aaPredicted RBP15.9■□□□□ 0.14
IRF1-208ENST00000472045 U2AF1L5P0DN76 240 aaPredicted RBP15.89■□□□□ 0.13
IRF1-208ENST00000472045 U2AF1Q01081 240 aaKnown RBP eCLIP15.89■□□□□ 0.13
IRF1-208ENST00000472045 MS4A1P11836 297 aa15.89■□□□□ 0.13
IRF1-208ENST00000472045 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.89■□□□□ 0.13
IRF1-208ENST00000472045 DNMBPQ6XZF7 1577 aa15.88■□□□□ 0.13
IRF1-208ENST00000472045 AMPHP49418 695 aa15.88■□□□□ 0.13
IRF1-208ENST00000472045 LAMC3Q9Y6N6 1575 aa15.88■□□□□ 0.13
IRF1-208ENST00000472045 ARHGAP5Q13017 1502 aa15.88■□□□□ 0.13
IRF1-208ENST00000472045 GOLGA2Q08379 1002 aa15.87■□□□□ 0.13
IRF1-208ENST00000472045 ZNF644Q9H582 1327 aaPredicted RBP15.87■□□□□ 0.13
IRF1-208ENST00000472045 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.86■□□□□ 0.13
IRF1-208ENST00000472045 KIF15Q9NS87 1388 aa15.86■□□□□ 0.13
IRF1-208ENST00000472045 ZNF330Q9Y3S2 320 aaPredicted RBP15.86■□□□□ 0.13
IRF1-208ENST00000472045 AFAP1Q8N556 730 aa15.85■□□□□ 0.13
IRF1-208ENST00000472045 CUX1P39880 1505 aa15.84■□□□□ 0.13
IRF1-208ENST00000472045 SYNJ1O43426 1573 aa15.84■□□□□ 0.13
IRF1-208ENST00000472045 CASC1Q6TDU7 716 aa15.84■□□□□ 0.13
IRF1-208ENST00000472045 LTV1Q96GA3 475 aaPredicted RBP15.84■□□□□ 0.13
IRF1-208ENST00000472045 CALD1Q05682 793 aaKnown RBP15.83■□□□□ 0.13
IRF1-208ENST00000472045 CASKIN1Q8WXD9 1431 aa15.83■□□□□ 0.12
IRF1-208ENST00000472045 MINK1Q8N4C8 1332 aaPredicted RBP15.81■□□□□ 0.12
IRF1-208ENST00000472045 RALBP1Q15311 655 aa15.81■□□□□ 0.12
IRF1-208ENST00000472045 EVC2Q86UK5 1308 aa15.8■□□□□ 0.12
IRF1-208ENST00000472045 FGD6Q6ZV73 1430 aa15.8■□□□□ 0.12
IRF1-208ENST00000472045 ANP32BQ92688 251 aaKnown RBP15.8■□□□□ 0.12
IRF1-208ENST00000472045 EVA1CP58658 441 aa15.79■□□□□ 0.12
IRF1-208ENST00000472045 MEX3CQ5U5Q3 659 aaKnown RBP15.79■□□□□ 0.12
IRF1-208ENST00000472045 TOP2BQ02880 1626 aa15.79■□□□□ 0.12
IRF1-208ENST00000472045 ATF3P18847 181 aa15.78■□□□□ 0.12
IRF1-208ENST00000472045 CHMP4AQ9BY43 222 aa15.78■□□□□ 0.12
IRF1-208ENST00000472045 FYCO1Q9BQS8 1478 aa15.78■□□□□ 0.12
IRF1-208ENST00000472045 ERICH3Q5RHP9 1530 aa15.77■□□□□ 0.12
IRF1-208ENST00000472045 COG3Q96JB2 828 aa15.76■□□□□ 0.11
IRF1-208ENST00000472045 EIF5BO60841 1220 aaKnown RBP15.76■□□□□ 0.11
IRF1-208ENST00000472045 NCOA2Q15596 1464 aa15.76■□□□□ 0.11
IRF1-208ENST00000472045 PSME1Q06323 249 aa15.76■□□□□ 0.11
IRF1-208ENST00000472045 TMX4Q9H1E5 349 aaPredicted RBP15.76■□□□□ 0.11
IRF1-208ENST00000472045 SUPT16HQ9Y5B9 1047 aaKnown RBP15.75■□□□□ 0.11
IRF1-208ENST00000472045 ANKRD50Q9ULJ7 1429 aa15.75■□□□□ 0.11
IRF1-208ENST00000472045 KIF21BO75037 1637 aa15.74■□□□□ 0.11
IRF1-208ENST00000472045 ST20-MTHFSA0A0A6YYL1 179 aa15.74■□□□□ 0.11
IRF1-208ENST00000472045 LRRC9Q6ZRR7 1453 aa15.73■□□□□ 0.11
IRF1-208ENST00000472045 EFCAB5A4FU69 1503 aa15.73■□□□□ 0.11
IRF1-208ENST00000472045 KIAA0586Q9BVV6 1533 aa15.73■□□□□ 0.11
IRF1-208ENST00000472045 STK31Q9BXU1 1019 aa15.72■□□□□ 0.11
IRF1-208ENST00000472045 PLEKHH2Q8IVE3 1493 aa15.72■□□□□ 0.11
IRF1-208ENST00000472045 RAPGEF3O95398 923 aa15.72■□□□□ 0.11
IRF1-208ENST00000472045 IPO8O15397 1037 aaKnown RBP15.71■□□□□ 0.11
IRF1-208ENST00000472045 POGZQ7Z3K3 1410 aa15.71■□□□□ 0.11
IRF1-208ENST00000472045 TXNDC2Q86VQ3 553 aa15.71■□□□□ 0.1
IRF1-208ENST00000472045 SCAPERQ9BY12 1400 aa15.71■□□□□ 0.1
IRF1-208ENST00000472045 CCER2I3L3R5 266 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms