RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 SCUBE2Q9NQ36 999 aa9.72□□□□□ -0.85
MDM2-216ENST00000471946 PDE4AP27815 886 aa9.71□□□□□ -0.86
MDM2-216ENST00000471946 MAMSTRQ6ZN01 415 aa9.71□□□□□ -0.86
MDM2-216ENST00000471946 NCKAP5LQ9HCH0 1330 aa9.7□□□□□ -0.86
MDM2-216ENST00000471946 LARP6Q9BRS8 491 aaKnown RBP9.69□□□□□ -0.86
MDM2-216ENST00000471946 WDR70Q9NW82 654 aa9.69□□□□□ -0.86
MDM2-216ENST00000471946 FAM163AQ96GL9 167 aaPredicted RBP9.67□□□□□ -0.86
MDM2-216ENST00000471946 CRISPLD2Q9H0B8 497 aa9.67□□□□□ -0.86
MDM2-216ENST00000471946 GPHNQ9NQX3 736 aaPredicted RBP9.65□□□□□ -0.86
MDM2-216ENST00000471946 TMEM92Q6UXU6 159 aa9.64□□□□□ -0.87
MDM2-216ENST00000471946 C2orf72A6NCS6 295 aa9.63□□□□□ -0.87
MDM2-216ENST00000471946 LCE2DQ5TA82 110 aaPredicted RBP9.63□□□□□ -0.87
MDM2-216ENST00000471946 POTEMA6NI47 508 aa9.62□□□□□ -0.87
MDM2-216ENST00000471946 C3orf67Q6ZVT6 689 aa9.62□□□□□ -0.87
MDM2-216ENST00000471946 TMC2Q8TDI7 906 aa9.62□□□□□ -0.87
MDM2-216ENST00000471946 MFSD10Q14728 455 aa9.61□□□□□ -0.87
MDM2-216ENST00000471946 POTEGQ6S5H5 508 aa9.61□□□□□ -0.87
MDM2-216ENST00000471946 SLAIN1Q8ND83 568 aa9.61□□□□□ -0.87
MDM2-216ENST00000471946 KIF3CO14782 793 aa9.6□□□□□ -0.87
MDM2-216ENST00000471946 DSG2Q14126 1118 aa9.6□□□□□ -0.87
MDM2-216ENST00000471946 DDX27Q96GQ7 796 aaKnown RBP9.6□□□□□ -0.87
MDM2-216ENST00000471946 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.6□□□□□ -0.87
MDM2-216ENST00000471946 FOXK1P85037 733 aa9.58□□□□□ -0.88
MDM2-216ENST00000471946 E2F4Q16254 413 aa9.57□□□□□ -0.88
MDM2-216ENST00000471946 PPP1R15BQ5SWA1 713 aa9.57□□□□□ -0.88
MDM2-216ENST00000471946 PLPP6Q8IY26 295 aa9.56□□□□□ -0.88
MDM2-216ENST00000471946 KCNV2Q8TDN2 545 aa9.53□□□□□ -0.88
MDM2-216ENST00000471946 PLSCR2Q9NRY7 297 aa9.53□□□□□ -0.88
MDM2-216ENST00000471946 CAMK2BQ13554 666 aa9.51□□□□□ -0.89
MDM2-216ENST00000471946 P3H3Q8IVL6 736 aa9.49□□□□□ -0.89
MDM2-216ENST00000471946 EMILIN3Q9NT22 766 aa9.48□□□□□ -0.89
MDM2-216ENST00000471946 ST18O60284 1047 aa9.47□□□□□ -0.89
MDM2-216ENST00000471946 ARHGEF1Q92888 912 aaKnown RBP9.47□□□□□ -0.89
MDM2-216ENST00000471946 BCANQ96GW7 911 aa9.46□□□□□ -0.9
MDM2-216ENST00000471946 UPF1Q92900 1129 aaKnown RBP eCLIP9.43□□□□□ -0.9
MDM2-216ENST00000471946 ARIH1Q9Y4X5 557 aaPredicted RBP9.43□□□□□ -0.9
MDM2-216ENST00000471946 DPYSL4O14531 572 aa9.42□□□□□ -0.9
MDM2-216ENST00000471946 MAP3K9P80192 1104 aa9.42□□□□□ -0.9
MDM2-216ENST00000471946 NBR1Q14596 966 aa9.42□□□□□ -0.9
MDM2-216ENST00000471946 OXER1Q8TDS5 423 aa9.41□□□□□ -0.9
MDM2-216ENST00000471946 SLC34A2O95436 690 aa9.4□□□□□ -0.9
MDM2-216ENST00000471946 PTCD2Q8WV60 388 aaKnown RBP9.4□□□□□ -0.9
MDM2-216ENST00000471946 HOXB3P14651 431 aaPredicted RBP9.39□□□□□ -0.91
MDM2-216ENST00000471946 MARVELD3Q96A59 401 aa9.39□□□□□ -0.91
MDM2-216ENST00000471946 SEMA3EO15041 775 aa9.38□□□□□ -0.91
MDM2-216ENST00000471946 TBC1D12O60347 775 aa9.37□□□□□ -0.91
MDM2-216ENST00000471946 DOK7Q18PE1 504 aa9.36□□□□□ -0.91
MDM2-216ENST00000471946 PCDHGA4Q9Y5G9 962 aa9.36□□□□□ -0.91
MDM2-216ENST00000471946 CDAN1Q8IWY9 1227 aa9.35□□□□□ -0.91
MDM2-216ENST00000471946 SPDYE16A6NNV3 312 aaPredicted RBP9.34□□□□□ -0.91
MDM2-216ENST00000471946 ARSIQ5FYB1 569 aa9.34□□□□□ -0.91
MDM2-216ENST00000471946 SNPHO15079 494 aa9.33□□□□□ -0.92
MDM2-216ENST00000471946 EVI5O60447 810 aa9.33□□□□□ -0.92
MDM2-216ENST00000471946 KHSRPQ92945 711 aaKnown RBP eCLIP9.33□□□□□ -0.926e-11■■□□□ 13.6
MDM2-216ENST00000471946 PDIA6Q15084 440 aa9.32□□□□□ -0.92
MDM2-216ENST00000471946 GPR153Q6NV75 609 aa9.32□□□□□ -0.92
MDM2-216ENST00000471946 ZNF710Q8N1W2 664 aa9.32□□□□□ -0.92
MDM2-216ENST00000471946 TESPA1A2RU30 521 aaPredicted RBP9.31□□□□□ -0.92
MDM2-216ENST00000471946 MLLT3P42568 568 aaPredicted RBP9.31□□□□□ -0.92
MDM2-216ENST00000471946 ANO8Q9HCE9 1232 aaPredicted RBP9.31□□□□□ -0.92
MDM2-216ENST00000471946 RIMBP2O15034 1052 aa9.3□□□□□ -0.92
MDM2-216ENST00000471946 KDM4FA0A1W2PPD8 638 aa9.29□□□□□ -0.92
MDM2-216ENST00000471946 PCDH10Q9P2E7 1040 aa9.29□□□□□ -0.92
MDM2-216ENST00000471946 NUDT7P0C024 238 aa9.28□□□□□ -0.92
MDM2-216ENST00000471946 ZSWIM6Q9HCJ5 1215 aa9.28□□□□□ -0.92
MDM2-216ENST00000471946 GRXCR2A6NFK2 248 aa9.27□□□□□ -0.93
MDM2-216ENST00000471946 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.27□□□□□ -0.93
MDM2-216ENST00000471946 POTEB3A0JP26 581 aa9.26□□□□□ -0.93
MDM2-216ENST00000471946 PTGER2P43116 358 aa9.26□□□□□ -0.93
MDM2-216ENST00000471946 POTEBQ6S5H4 581 aa9.26□□□□□ -0.93
MDM2-216ENST00000471946 DDX12PQ92771 950 aa9.26□□□□□ -0.93
MDM2-216ENST00000471946 EMP3P54852 163 aa9.25□□□□□ -0.93
MDM2-216ENST00000471946 SMYD5Q6GMV2 418 aa9.25□□□□□ -0.93
MDM2-216ENST00000471946 HOXB1P14653 301 aaPredicted RBP9.24□□□□□ -0.93
MDM2-216ENST00000471946 FAM205CA6NFA0 338 aa9.23□□□□□ -0.93
MDM2-216ENST00000471946 ZNF316A6NFI3 1004 aaPredicted RBP9.21□□□□□ -0.94
MDM2-216ENST00000471946 TULP1O00294 542 aaPredicted RBP9.21□□□□□ -0.94
MDM2-216ENST00000471946 OSBPP22059 807 aa9.21□□□□□ -0.94
MDM2-216ENST00000471946 LHX6Q9UPM6 363 aa9.21□□□□□ -0.94
MDM2-216ENST00000471946 RBM26Q5T8P6 1007 aaKnown RBP9.2□□□□□ -0.94
MDM2-216ENST00000471946 LMOD2Q6P5Q4 547 aa9.2□□□□□ -0.94
MDM2-216ENST00000471946 HS3ST6Q96QI5 342 aa9.2□□□□□ -0.94
MDM2-216ENST00000471946 PCDHGA10Q9Y5H3 936 aa9.19□□□□□ -0.94
MDM2-216ENST00000471946 PHF14O94880 888 aa9.18□□□□□ -0.94
MDM2-216ENST00000471946 PRIM1P49642 420 aaKnown RBP9.18□□□□□ -0.94
MDM2-216ENST00000471946 PRKCSHP14314 528 aaPredicted RBP9.17□□□□□ -0.94
MDM2-216ENST00000471946 FOSBP53539 338 aa9.16□□□□□ -0.94
MDM2-216ENST00000471946 ZNF454Q8N9F8 522 aa9.16□□□□□ -0.94
MDM2-216ENST00000471946 EPAS1Q99814 870 aa9.16□□□□□ -0.94
MDM2-216ENST00000471946 TPRNQ4KMQ1 711 aa9.15□□□□□ -0.94
MDM2-216ENST00000471946 RBM33Q96EV2 1170 aaKnown RBP9.15□□□□□ -0.94
MDM2-216ENST00000471946 JPH4Q96JJ6 628 aa9.14□□□□□ -0.95
MDM2-216ENST00000471946 TYW1BQ6NUM6 668 aa9.13□□□□□ -0.95
MDM2-216ENST00000471946 ZDHHC16Q969W1 377 aa9.13□□□□□ -0.95
MDM2-216ENST00000471946 KRTAP3-3Q9BYR6 98 aa9.13□□□□□ -0.95
MDM2-216ENST00000471946 KRTAP3-2Q9BYR7 98 aa9.13□□□□□ -0.95
MDM2-216ENST00000471946 ERBB3P21860 1342 aa9.12□□□□□ -0.95
MDM2-216ENST00000471946 NUTM2FA1L443 756 aa9.12□□□□□ -0.95
MDM2-216ENST00000471946 SPNS2Q8IVW8 549 aa9.11□□□□□ -0.95
MDM2-216ENST00000471946 ZC3H15Q8WU90 426 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms