RNA–Protein interactions for RNA: ENST00000471255.5

TMEM164-207, Transcript of transmembrane protein 164, humanhuman

TSL 3

Gene TMEM164, Length 418 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM164-207ENST00000471255 MAGI2Q86UL8 1455 aa28.89■■■□□ 2.22
TMEM164-207ENST00000471255 POGZQ7Z3K3 1410 aa28.88■■■□□ 2.21
TMEM164-207ENST00000471255 EFCAB2Q5VUJ9 269 aa28.88■■■□□ 2.21
TMEM164-207ENST00000471255 LRRIQ1Q96JM4 1722 aa28.85■■■□□ 2.21
TMEM164-207ENST00000471255 YEATS2Q9ULM3 1422 aa28.85■■■□□ 2.21
TMEM164-207ENST00000471255 PCF11O94913 1555 aaKnown RBP28.83■■■□□ 2.21
TMEM164-207ENST00000471255 CASKIN1Q8WXD9 1431 aa28.82■■■□□ 2.2
TMEM164-207ENST00000471255 ARHGAP5Q13017 1502 aa28.81■■■□□ 2.2
TMEM164-207ENST00000471255 CCDC18Q5T9S5 1454 aa28.81■■■□□ 2.2
TMEM164-207ENST00000471255 RIMS1Q86UR5 1692 aaKnown RBP28.8■■■□□ 2.2
TMEM164-207ENST00000471255 SIGLEC1Q9BZZ2 1709 aa28.74■■■□□ 2.19
TMEM164-207ENST00000471255 ZNF518AQ6AHZ1 1483 aa28.74■■■□□ 2.19
TMEM164-207ENST00000471255 ILDR1Q86SU0 546 aaPredicted RBP28.74■■■□□ 2.19
TMEM164-207ENST00000471255 FYCO1Q9BQS8 1478 aa28.73■■■□□ 2.19
TMEM164-207ENST00000471255 ATP10AO60312 1499 aa28.72■■■□□ 2.19
TMEM164-207ENST00000471255 C9orf84Q5VXU9 1444 aa28.71■■■□□ 2.19
TMEM164-207ENST00000471255 MLECQ14165 292 aa28.69■■■□□ 2.18
TMEM164-207ENST00000471255 CDC42BPBQ9Y5S2 1711 aa28.69■■■□□ 2.18
TMEM164-207ENST00000471255 PREX2Q70Z35 1606 aa28.68■■■□□ 2.18
TMEM164-207ENST00000471255 KDM5CP41229 1560 aa28.67■■■□□ 2.18
TMEM164-207ENST00000471255 FER1L4A9Z1Z3 1794 aa28.66■■■□□ 2.18
TMEM164-207ENST00000471255 LMTK3Q96Q04 1460 aa28.66■■■□□ 2.18
TMEM164-207ENST00000471255 PLPPR3Q6T4P5 718 aa28.65■■■□□ 2.18
TMEM164-207ENST00000471255 AFAP1Q8N556 730 aa28.65■■■□□ 2.18
TMEM164-207ENST00000471255 MYT1LQ9UL68 1186 aa28.65■■■□□ 2.18
TMEM164-207ENST00000471255 ABCC1P33527 1531 aa28.61■■■□□ 2.17
TMEM164-207ENST00000471255 ARHGEF12Q9NZN5 1544 aa28.6■■■□□ 2.17
TMEM164-207ENST00000471255 CDC42BPAQ5VT25 1732 aa28.58■■■□□ 2.17
TMEM164-207ENST00000471255 DIP2CQ9Y2E4 1556 aa28.57■■■□□ 2.16
TMEM164-207ENST00000471255 ITSN2Q9NZM3 1697 aa28.56■■■□□ 2.16
TMEM164-207ENST00000471255 MLH3Q9UHC1 1453 aa28.56■■■□□ 2.16
TMEM164-207ENST00000471255 TRAPPC8Q9Y2L5 1435 aa28.55■■■□□ 2.16
TMEM164-207ENST00000471255 ABCA6Q8N139 1617 aa28.53■■■□□ 2.16
TMEM164-207ENST00000471255 REREQ9P2R6 1566 aa28.53■■■□□ 2.16
TMEM164-207ENST00000471255 HSPA2P54652 639 aa28.49■■■□□ 2.15
TMEM164-207ENST00000471255 ZNF777Q9ULD5 760 aaPredicted RBP28.49■■■□□ 2.15
TMEM164-207ENST00000471255 GPATCH8Q9UKJ3 1502 aaKnown RBP28.47■■■□□ 2.15
TMEM164-207ENST00000471255 MTUS2Q5JR59 1369 aa28.46■■■□□ 2.15
TMEM164-207ENST00000471255 SAMD9LQ8IVG5 1584 aa28.45■■■□□ 2.15
TMEM164-207ENST00000471255 AGLP35573 1532 aa28.44■■■□□ 2.14
TMEM164-207ENST00000471255 SYCP2Q9BX26 1530 aa28.43■■■□□ 2.14
TMEM164-207ENST00000471255 KIDINS220Q9ULH0 1771 aa28.43■■■□□ 2.14
TMEM164-207ENST00000471255 CCNB3Q8WWL7 1395 aa28.43■■■□□ 2.14
TMEM164-207ENST00000471255 CEBPAP49715 358 aaPredicted RBP28.41■■■□□ 2.14
TMEM164-207ENST00000471255 CFDP1Q9UEE9 299 aaPredicted RBP28.41■■■□□ 2.14
TMEM164-207ENST00000471255 CEP162Q5TB80 1403 aa28.41■■■□□ 2.14
TMEM164-207ENST00000471255 PREX1Q8TCU6 1659 aa28.41■■■□□ 2.14
TMEM164-207ENST00000471255 PLEKHH2Q8IVE3 1493 aa28.4■■■□□ 2.14
TMEM164-207ENST00000471255 ESF1Q9H501 851 aaKnown RBP28.38■■■□□ 2.13
TMEM164-207ENST00000471255 FBXO41Q8TF61 875 aa28.37■■■□□ 2.13
TMEM164-207ENST00000471255 SPAG9O60271 1321 aaKnown RBP28.37■■■□□ 2.13
TMEM164-207ENST00000471255 KIAA1107Q9UPP5 1409 aa28.36■■■□□ 2.13
TMEM164-207ENST00000471255 HNRNPMP52272 730 aaKnown RBP eCLIP28.36■■■□□ 2.135e-6■■■■□ 21
TMEM164-207ENST00000471255 EHBP1L1Q8N3D4 1523 aa28.35■■■□□ 2.13
TMEM164-207ENST00000471255 SETD1BQ9UPS6 1966 aaKnown RBP28.32■■■□□ 2.12
TMEM164-207ENST00000471255 UHRF1BP1Q6BDS2 1440 aa28.32■■■□□ 2.12
TMEM164-207ENST00000471255 ATP7AQ04656 1500 aa28.31■■■□□ 2.12
TMEM164-207ENST00000471255 C3P01024 1663 aa28.31■■■□□ 2.12
TMEM164-207ENST00000471255 CNTLNQ9NXG0 1405 aa28.3■■■□□ 2.12
TMEM164-207ENST00000471255 TIAM1Q13009 1591 aa28.29■■■□□ 2.12
TMEM164-207ENST00000471255 INO80Q9ULG1 1556 aaPredicted RBP28.28■■■□□ 2.12
TMEM164-207ENST00000471255 SUPT6HQ7KZ85 1726 aaKnown RBP28.24■■■□□ 2.11
TMEM164-207ENST00000471255 A2MP01023 1474 aa28.22■■■□□ 2.11
TMEM164-207ENST00000471255 PLXNC1O60486 1568 aa28.21■■■□□ 2.11
TMEM164-207ENST00000471255 ZNF644Q9H582 1327 aaPredicted RBP28.2■■■□□ 2.11
TMEM164-207ENST00000471255 MROH2AA6NES4 1674 aa28.19■■■□□ 2.1
TMEM164-207ENST00000471255 DMRT2Q9Y5R5 561 aa28.18■■■□□ 2.1
TMEM164-207ENST00000471255 ADGBQ8N7X0 1667 aa28.16■■■□□ 2.1
TMEM164-207ENST00000471255 MBD5Q9P267 1494 aa28.16■■■□□ 2.1
TMEM164-207ENST00000471255 STRCQ7RTU9 1775 aa28.16■■■□□ 2.1
TMEM164-207ENST00000471255 NCOA2Q15596 1464 aa28.15■■■□□ 2.1
TMEM164-207ENST00000471255 NPATQ14207 1427 aa28.14■■■□□ 2.1
TMEM164-207ENST00000471255 ZMYM3Q14202 1370 aa28.13■■■□□ 2.09
TMEM164-207ENST00000471255 CERKQ8TCT0 537 aa28.13■■■□□ 2.09
TMEM164-207ENST00000471255 RTEL1-TNFRSF6BF6WH68 1400 aa28.11■■■□□ 2.09
TMEM164-207ENST00000471255 VPS8Q8N3P4 1428 aa28.11■■■□□ 2.09
TMEM164-207ENST00000471255 CLTCQ00610 1675 aaKnown RBP28.11■■■□□ 2.09
TMEM164-207ENST00000471255 GGT6Q6P531 493 aa28.1■■■□□ 2.09
TMEM164-207ENST00000471255 CAMSAP2Q08AD1 1489 aa28.09■■■□□ 2.09
TMEM164-207ENST00000471255 LOC105371045A0A1W2PR82 267 aa28.09■■■□□ 2.09
TMEM164-207ENST00000471255 CCDC141Q6ZP82 1450 aa28.08■■■□□ 2.09
TMEM164-207ENST00000471255 PTPRTO14522 1441 aa28.05■■■□□ 2.08
TMEM164-207ENST00000471255 PPP6R1Q9UPN7 881 aa28.05■■■□□ 2.08
TMEM164-207ENST00000471255 RSPH4AQ5TD94 716 aa28.04■■■□□ 2.08
TMEM164-207ENST00000471255 DHX29Q7Z478 1369 aaKnown RBP28.03■■■□□ 2.08
TMEM164-207ENST00000471255 LRRC9Q6ZRR7 1453 aa28.02■■■□□ 2.08
TMEM164-207ENST00000471255 NCOA1Q15788 1441 aa28.02■■■□□ 2.08
TMEM164-207ENST00000471255 PTPRKQ15262 1439 aa28■■■□□ 2.07
TMEM164-207ENST00000471255 CAMSAP1Q5T5Y3 1602 aa27.99■■■□□ 2.07
TMEM164-207ENST00000471255 ARHGEF5Q12774 1597 aa27.99■■■□□ 2.07
TMEM164-207ENST00000471255 MYO3AQ8NEV4 1616 aa27.98■■■□□ 2.07
TMEM164-207ENST00000471255 ZNF142P52746 1687 aaPredicted RBP27.96■■■□□ 2.07
TMEM164-207ENST00000471255 MAP3K1Q13233 1512 aa27.96■■■□□ 2.07
TMEM164-207ENST00000471255 KIF3BO15066 747 aa27.95■■■□□ 2.06
TMEM164-207ENST00000471255 TSPY4P0CV99 314 aa27.94■■■□□ 2.06
TMEM164-207ENST00000471255 TSPY10P0CW01 314 aa27.94■■■□□ 2.06
TMEM164-207ENST00000471255 CEP170BQ9Y4F5 1589 aaPredicted RBP27.94■■■□□ 2.06
TMEM164-207ENST00000471255 FAM135AQ9P2D6 1515 aa27.91■■■□□ 2.06
TMEM164-207ENST00000471255 KDM5DQ9BY66 1539 aa27.9■■■□□ 2.06
TMEM164-207ENST00000471255 KANK4Q5T7N3 995 aaPredicted RBP27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms