RNA–Protein interactions for RNA: ENST00000471234.5

TNPO3-203, Transcript of transportin 3, humanhuman

TSL 1 (best) BASIC

Gene TNPO3, Length 3,283 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-203ENST00000471234 DIEXFQ68CQ4 756 aaKnown RBP12.92□□□□□ -0.34
TNPO3-203ENST00000471234 BCORL1Q5H9F3 1711 aa12.91□□□□□ -0.34
TNPO3-203ENST00000471234 AFAP1Q8N556 730 aa12.91□□□□□ -0.34
TNPO3-203ENST00000471234 ZNF316A6NFI3 1004 aaPredicted RBP12.9□□□□□ -0.34
TNPO3-203ENST00000471234 MPHOSPH9Q99550 1183 aa12.89□□□□□ -0.35
TNPO3-203ENST00000471234 TONSLQ96HA7 1378 aa12.88□□□□□ -0.35
TNPO3-203ENST00000471234 MYT1Q01538 1121 aa12.88□□□□□ -0.35
TNPO3-203ENST00000471234 ARAP3Q8WWN8 1544 aa12.88□□□□□ -0.35
TNPO3-203ENST00000471234 ACIN1Q9UKV3 1341 aaKnown RBP12.88□□□□□ -0.35
TNPO3-203ENST00000471234 CNGB1Q14028 1251 aaPredicted RBP12.87□□□□□ -0.35
TNPO3-203ENST00000471234 POLR3GLQ9BT43 218 aa12.87□□□□□ -0.35
TNPO3-203ENST00000471234 LRRIQ1Q96JM4 1722 aa12.87□□□□□ -0.35
TNPO3-203ENST00000471234 PTPN23Q9H3S7 1636 aa12.86□□□□□ -0.35
TNPO3-203ENST00000471234 KDM2AQ9Y2K7 1162 aa12.86□□□□□ -0.35
TNPO3-203ENST00000471234 GPATCH8Q9UKJ3 1502 aaKnown RBP12.86□□□□□ -0.35
TNPO3-203ENST00000471234 PKD2Q13563 968 aa12.85□□□□□ -0.35
TNPO3-203ENST00000471234 YTHDC1Q96MU7 727 aaKnown RBP12.85□□□□□ -0.35
TNPO3-203ENST00000471234 KDM5BQ9UGL1 1544 aa12.85□□□□□ -0.35
TNPO3-203ENST00000471234 SENP3Q9H4L4 574 aaPredicted RBP12.84□□□□□ -0.35
TNPO3-203ENST00000471234 RGL3Q3MIN7 710 aa12.84□□□□□ -0.35
TNPO3-203ENST00000471234 MIA2Q96PC5 1412 aa12.84□□□□□ -0.35
TNPO3-203ENST00000471234 ANKRD30AQ9BXX3 1397 aa12.84□□□□□ -0.35
TNPO3-203ENST00000471234 KIF14Q15058 1648 aa12.84□□□□□ -0.35
TNPO3-203ENST00000471234 ARHGAP5Q13017 1502 aa12.83□□□□□ -0.35
TNPO3-203ENST00000471234 NAIPQ13075 1403 aa12.83□□□□□ -0.36
TNPO3-203ENST00000471234 FAM69CQ0P6D2 419 aa12.83□□□□□ -0.36
TNPO3-203ENST00000471234 NUP155O75694 1391 aa12.83□□□□□ -0.36
TNPO3-203ENST00000471234 ABCC5O15440 1437 aa12.83□□□□□ -0.36
TNPO3-203ENST00000471234 DAPK1P53355 1430 aa12.83□□□□□ -0.36
TNPO3-203ENST00000471234 CENPBP07199 599 aaPredicted RBP12.82□□□□□ -0.36
TNPO3-203ENST00000471234 UHRF1BP1LA0JNW5 1464 aa12.82□□□□□ -0.36
TNPO3-203ENST00000471234 SPAG9O60271 1321 aaKnown RBP12.81□□□□□ -0.36
TNPO3-203ENST00000471234 CAMSAP2Q08AD1 1489 aa12.81□□□□□ -0.36
TNPO3-203ENST00000471234 ABCA8O94911 1581 aa12.81□□□□□ -0.36
TNPO3-203ENST00000471234 PLPPR3Q6T4P5 718 aa12.81□□□□□ -0.36
TNPO3-203ENST00000471234 TRHP20396 242 aaPredicted RBP12.8□□□□□ -0.36
TNPO3-203ENST00000471234 GTF3C3Q9Y5Q9 886 aa12.8□□□□□ -0.36
TNPO3-203ENST00000471234 HFM1A2PYH4 1435 aa12.79□□□□□ -0.36
TNPO3-203ENST00000471234 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.79□□□□□ -0.36
TNPO3-203ENST00000471234 CLSPNQ9HAW4 1339 aa12.79□□□□□ -0.36
TNPO3-203ENST00000471234 GGT6Q6P531 493 aa12.79□□□□□ -0.36
TNPO3-203ENST00000471234 RAPGEF3O95398 923 aa12.79□□□□□ -0.36
TNPO3-203ENST00000471234 ABCC2Q92887 1545 aa12.78□□□□□ -0.36
TNPO3-203ENST00000471234 KIF3BO15066 747 aa12.78□□□□□ -0.36
TNPO3-203ENST00000471234 KIF15Q9NS87 1388 aa12.78□□□□□ -0.36
TNPO3-203ENST00000471234 CHGAP10645 457 aaKnown RBP12.78□□□□□ -0.36
TNPO3-203ENST00000471234 ASXL2Q76L83 1435 aa12.77□□□□□ -0.37
TNPO3-203ENST00000471234 C9orf84Q5VXU9 1444 aa12.76□□□□□ -0.37
TNPO3-203ENST00000471234 RSPH4AQ5TD94 716 aa12.75□□□□□ -0.37
TNPO3-203ENST00000471234 ANKRD50Q9ULJ7 1429 aa12.75□□□□□ -0.37
TNPO3-203ENST00000471234 MLECQ14165 292 aa12.75□□□□□ -0.37
TNPO3-203ENST00000471234 DDX10Q13206 875 aaKnown RBP12.75□□□□□ -0.37
TNPO3-203ENST00000471234 L3MBTL2Q969R5 705 aa12.75□□□□□ -0.37
TNPO3-203ENST00000471234 FAM135AQ9P2D6 1515 aa12.74□□□□□ -0.37
TNPO3-203ENST00000471234 NCOA1Q15788 1441 aa12.73□□□□□ -0.37
TNPO3-203ENST00000471234 PPP1R15AO75807 674 aaPredicted RBP12.73□□□□□ -0.37
TNPO3-203ENST00000471234 SCAPERQ9BY12 1400 aa12.72□□□□□ -0.37
TNPO3-203ENST00000471234 DCAF11Q8TEB1 546 aa12.7□□□□□ -0.38
TNPO3-203ENST00000471234 TCOF1Q13428 1488 aaKnown RBP12.7□□□□□ -0.38
TNPO3-203ENST00000471234 AKNAQ7Z591 1439 aa12.7□□□□□ -0.38
TNPO3-203ENST00000471234 CD109Q6YHK3 1445 aa12.69□□□□□ -0.38
TNPO3-203ENST00000471234 ABCC10Q5T3U5 1492 aa12.69□□□□□ -0.38
TNPO3-203ENST00000471234 WDR7Q9Y4E6 1490 aa12.69□□□□□ -0.38
TNPO3-203ENST00000471234 MIER1Q8N108 512 aa12.68□□□□□ -0.38
TNPO3-203ENST00000471234 SYCP2Q9BX26 1530 aa12.68□□□□□ -0.38
TNPO3-203ENST00000471234 PLCH2O75038 1416 aa12.68□□□□□ -0.38
TNPO3-203ENST00000471234 TRAPPC8Q9Y2L5 1435 aa12.68□□□□□ -0.38
TNPO3-203ENST00000471234 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.68□□□□□ -0.381e-7■■■■■ 31.2
TNPO3-203ENST00000471234 GLI2P10070 1586 aa12.67□□□□□ -0.38
TNPO3-203ENST00000471234 ARID4BQ4LE39 1312 aaPredicted RBP12.67□□□□□ -0.38
TNPO3-203ENST00000471234 FANCAO15360 1455 aa12.66□□□□□ -0.38
TNPO3-203ENST00000471234 CCDC141Q6ZP82 1450 aa12.66□□□□□ -0.38
TNPO3-203ENST00000471234 TTC37Q6PGP7 1564 aa12.66□□□□□ -0.38
TNPO3-203ENST00000471234 NEURL4Q96JN8 1562 aa12.66□□□□□ -0.38
TNPO3-203ENST00000471234 CROCC2H7BZ55 1655 aa12.66□□□□□ -0.38
TNPO3-203ENST00000471234 MAPKBP1O60336 1514 aa12.66□□□□□ -0.38
TNPO3-203ENST00000471234 ZCCHC11Q5TAX3 1644 aaKnown RBP12.66□□□□□ -0.38
TNPO3-203ENST00000471234 ROCK1Q13464 1354 aa12.66□□□□□ -0.38
TNPO3-203ENST00000471234 KDM6BO15054 1643 aa12.65□□□□□ -0.38
TNPO3-203ENST00000471234 MAST1Q9Y2H9 1570 aa12.65□□□□□ -0.38
TNPO3-203ENST00000471234 ADGRL1O94910 1474 aa12.63□□□□□ -0.39
TNPO3-203ENST00000471234 PLEKHH2Q8IVE3 1493 aa12.63□□□□□ -0.39
TNPO3-203ENST00000471234 ITSN2Q9NZM3 1697 aa12.62□□□□□ -0.39
TNPO3-203ENST00000471234 NUTM2DQ5VT03 806 aaPredicted RBP12.61□□□□□ -0.39
TNPO3-203ENST00000471234 ESF1Q9H501 851 aaKnown RBP12.61□□□□□ -0.39
TNPO3-203ENST00000471234 EIF4G2P78344 907 aaKnown RBP eCLIP12.61□□□□□ -0.39
TNPO3-203ENST00000471234 WASHC2CQ9Y4E1 1318 aa12.61□□□□□ -0.39
TNPO3-203ENST00000471234 DNMT1P26358 1616 aaKnown RBP12.6□□□□□ -0.39
TNPO3-203ENST00000471234 CFAP74Q9C0B2 1584 aa12.6□□□□□ -0.39
TNPO3-203ENST00000471234 MBD5Q9P267 1494 aa12.6□□□□□ -0.39
TNPO3-203ENST00000471234 CDC42BPAQ5VT25 1732 aa12.6□□□□□ -0.39
TNPO3-203ENST00000471234 HSPA5P11021 654 aaKnown RBP12.59□□□□□ -0.39
TNPO3-203ENST00000471234 TIMELESSQ9UNS1 1208 aa12.59□□□□□ -0.39
TNPO3-203ENST00000471234 NBPF8Q3BBV2 869 aa12.59□□□□□ -0.39
TNPO3-203ENST00000471234 ARHGEF12Q9NZN5 1544 aa12.59□□□□□ -0.39
TNPO3-203ENST00000471234 REREQ9P2R6 1566 aa12.58□□□□□ -0.39
TNPO3-203ENST00000471234 CARD11Q9BXL7 1154 aa12.58□□□□□ -0.4
TNPO3-203ENST00000471234 STAG3Q9UJ98 1225 aa12.58□□□□□ -0.4
TNPO3-203ENST00000471234 SAMD9LQ8IVG5 1584 aa12.58□□□□□ -0.4
TNPO3-203ENST00000471234 KANK1Q14678 1352 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms