RNA–Protein interactions for RNA: ENST00000471157.2

CDKN1C-205, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

TSL 2

Gene CDKN1C, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-205ENST00000471157 PREX2Q70Z35 1606 aa39.25■■■■□ 3.87
CDKN1C-205ENST00000471157 SCAPERQ9BY12 1400 aa39.24■■■■□ 3.87
CDKN1C-205ENST00000471157 CDC42BPBQ9Y5S2 1711 aa39.23■■■■□ 3.87
CDKN1C-205ENST00000471157 EHBP1L1Q8N3D4 1523 aa39.21■■■■□ 3.87
CDKN1C-205ENST00000471157 KDM4FA0A1W2PPD8 638 aa39.21■■■■□ 3.87
CDKN1C-205ENST00000471157 CDC42BPAQ5VT25 1732 aa39.18■■■■□ 3.86
CDKN1C-205ENST00000471157 POGZQ7Z3K3 1410 aa39.17■■■■□ 3.86
CDKN1C-205ENST00000471157 ZMYM4Q5VZL5 1548 aa39.14■■■■□ 3.86
CDKN1C-205ENST00000471157 TIAM1Q13009 1591 aa39.14■■■■□ 3.86
CDKN1C-205ENST00000471157 GPATCH8Q9UKJ3 1502 aaKnown RBP39.12■■■■□ 3.85
CDKN1C-205ENST00000471157 ARHGEF40Q8TER5 1519 aa39.09■■■■□ 3.85
CDKN1C-205ENST00000471157 CCNB3Q8WWL7 1395 aa39.09■■■■□ 3.85
CDKN1C-205ENST00000471157 MAGI2Q86UL8 1455 aa39.06■■■■□ 3.84
CDKN1C-205ENST00000471157 ZNF518AQ6AHZ1 1483 aa39.05■■■■□ 3.84
CDKN1C-205ENST00000471157 ABCC1P33527 1531 aa39.05■■■■□ 3.84
CDKN1C-205ENST00000471157 ZFYVE16Q7Z3T8 1539 aa39.04■■■■□ 3.84
CDKN1C-205ENST00000471157 ZNF777Q9ULD5 760 aaPredicted RBP39.02■■■■□ 3.84
CDKN1C-205ENST00000471157 YEATS2Q9ULM3 1422 aa39■■■■□ 3.83
CDKN1C-205ENST00000471157 CFDP1Q9UEE9 299 aaPredicted RBP39■■■■□ 3.83
CDKN1C-205ENST00000471157 MAP3K1Q13233 1512 aa38.99■■■■□ 3.83
CDKN1C-205ENST00000471157 SUPT6HQ7KZ85 1726 aaKnown RBP38.99■■■■□ 3.83
CDKN1C-205ENST00000471157 ITSN2Q9NZM3 1697 aa38.98■■■■□ 3.83
CDKN1C-205ENST00000471157 AFAP1Q8N556 730 aa38.98■■■■□ 3.83
CDKN1C-205ENST00000471157 ARHGEF12Q9NZN5 1544 aa38.98■■■■□ 3.83
CDKN1C-205ENST00000471157 LRRC9Q6ZRR7 1453 aa38.98■■■■□ 3.83
CDKN1C-205ENST00000471157 KDM5CP41229 1560 aa38.97■■■■□ 3.83
CDKN1C-205ENST00000471157 SAMD9LQ8IVG5 1584 aa38.97■■■■□ 3.83
CDKN1C-205ENST00000471157 NCOA2Q15596 1464 aa38.96■■■■□ 3.83
CDKN1C-205ENST00000471157 TRAPPC8Q9Y2L5 1435 aa38.93■■■■□ 3.82
CDKN1C-205ENST00000471157 ARID4BQ4LE39 1312 aaPredicted RBP38.92■■■■□ 3.82
CDKN1C-205ENST00000471157 PLEKHH2Q8IVE3 1493 aa38.9■■■■□ 3.82
CDKN1C-205ENST00000471157 SYCP2Q9BX26 1530 aa38.89■■■■□ 3.82
CDKN1C-205ENST00000471157 APLP2Q06481 763 aa38.89■■■■□ 3.82
CDKN1C-205ENST00000471157 HECW2Q9P2P5 1572 aa38.88■■■■□ 3.81
CDKN1C-205ENST00000471157 MYT1LQ9UL68 1186 aa38.88■■■■□ 3.81
CDKN1C-205ENST00000471157 KANK4Q5T7N3 995 aaPredicted RBP38.87■■■■□ 3.81
CDKN1C-205ENST00000471157 KIAA1107Q9UPP5 1409 aa38.85■■■■□ 3.81
CDKN1C-205ENST00000471157 ATP10AO60312 1499 aa38.85■■■■□ 3.81
CDKN1C-205ENST00000471157 MLH3Q9UHC1 1453 aa38.84■■■■□ 3.81
CDKN1C-205ENST00000471157 HNRNPMP52272 730 aaKnown RBP eCLIP38.82■■■■□ 3.8
CDKN1C-205ENST00000471157 C9orf84Q5VXU9 1444 aa38.8■■■■□ 3.8
CDKN1C-205ENST00000471157 BCORL1Q5H9F3 1711 aa38.8■■■■□ 3.8
CDKN1C-205ENST00000471157 ADAMTSL3P82987 1691 aa38.78■■■■□ 3.8
CDKN1C-205ENST00000471157 ZNF644Q9H582 1327 aaPredicted RBP38.77■■■■□ 3.8
CDKN1C-205ENST00000471157 SIGLEC1Q9BZZ2 1709 aa38.77■■■■□ 3.8
CDKN1C-205ENST00000471157 DIP2CQ9Y2E4 1556 aa38.76■■■■□ 3.8
CDKN1C-205ENST00000471157 ABCA6Q8N139 1617 aa38.74■■■■□ 3.79
CDKN1C-205ENST00000471157 SPAG9O60271 1321 aaKnown RBP38.71■■■■□ 3.79
CDKN1C-205ENST00000471157 KIDINS220Q9ULH0 1771 aa38.71■■■■□ 3.79
CDKN1C-205ENST00000471157 CAMSAP2Q08AD1 1489 aa38.68■■■■□ 3.78
CDKN1C-205ENST00000471157 MADDQ8WXG6 1647 aa38.67■■■■□ 3.78
CDKN1C-205ENST00000471157 REREQ9P2R6 1566 aa38.67■■■■□ 3.78
CDKN1C-205ENST00000471157 MBD5Q9P267 1494 aa38.66■■■■□ 3.78
CDKN1C-205ENST00000471157 MLECQ14165 292 aa38.63■■■■□ 3.77
CDKN1C-205ENST00000471157 ATP7AQ04656 1500 aa38.63■■■■□ 3.77
CDKN1C-205ENST00000471157 INO80Q9ULG1 1556 aaPredicted RBP38.62■■■■□ 3.77
CDKN1C-205ENST00000471157 MYOM3Q5VTT5 1437 aa38.62■■■■□ 3.77
CDKN1C-205ENST00000471157 PTPRMP28827 1452 aa38.6■■■■□ 3.77
CDKN1C-205ENST00000471157 CCDC141Q6ZP82 1450 aa38.57■■■■□ 3.76
CDKN1C-205ENST00000471157 MIA2Q96PC5 1412 aa38.56■■■■□ 3.76
CDKN1C-205ENST00000471157 RIMS1Q86UR5 1692 aaKnown RBP38.55■■■■□ 3.76
CDKN1C-205ENST00000471157 RSPH4AQ5TD94 716 aa38.54■■■■□ 3.76
CDKN1C-205ENST00000471157 AGLP35573 1532 aa38.53■■■■□ 3.76
CDKN1C-205ENST00000471157 ARHGEF5Q12774 1597 aa38.51■■■■□ 3.76
CDKN1C-205ENST00000471157 FER1L4A9Z1Z3 1794 aa38.5■■■■□ 3.75
CDKN1C-205ENST00000471157 RTEL1-TNFRSF6BF6WH68 1400 aa38.49■■■■□ 3.75
CDKN1C-205ENST00000471157 A2MP01023 1474 aa38.45■■■■□ 3.75
CDKN1C-205ENST00000471157 ADGBQ8N7X0 1667 aa38.42■■■■□ 3.74
CDKN1C-205ENST00000471157 PLXNC1O60486 1568 aa38.41■■■■□ 3.74
CDKN1C-205ENST00000471157 TSPY4P0CV99 314 aa38.41■■■■□ 3.74
CDKN1C-205ENST00000471157 TSPY10P0CW01 314 aa38.41■■■■□ 3.74
CDKN1C-205ENST00000471157 PTPN23Q9H3S7 1636 aa38.38■■■■□ 3.73
CDKN1C-205ENST00000471157 FGD6Q6ZV73 1430 aa38.38■■■■□ 3.73
CDKN1C-205ENST00000471157 PLPPR3Q6T4P5 718 aa38.36■■■■□ 3.73
CDKN1C-205ENST00000471157 ESF1Q9H501 851 aaKnown RBP38.31■■■■□ 3.72
CDKN1C-205ENST00000471157 MAST1Q9Y2H9 1570 aa38.31■■■■□ 3.72
CDKN1C-205ENST00000471157 DHX29Q7Z478 1369 aaKnown RBP38.3■■■■□ 3.72
CDKN1C-205ENST00000471157 TCOF1Q13428 1488 aaKnown RBP38.29■■■■□ 3.72
CDKN1C-205ENST00000471157 CNTLNQ9NXG0 1405 aa38.23■■■■□ 3.71
CDKN1C-205ENST00000471157 ABCC5O15440 1437 aa38.21■■■■□ 3.71
CDKN1C-205ENST00000471157 CEBPAP49715 358 aaPredicted RBP38.2■■■■□ 3.71
CDKN1C-205ENST00000471157 GGT6Q6P531 493 aa38.2■■■■□ 3.71
CDKN1C-205ENST00000471157 SHANK2Q9UPX8 1470 aa38.19■■■■□ 3.7
CDKN1C-205ENST00000471157 CROCC2H7BZ55 1655 aa38.19■■■■□ 3.7
CDKN1C-205ENST00000471157 DNMT1P26358 1616 aaKnown RBP38.19■■■■□ 3.7
CDKN1C-205ENST00000471157 DAPK1P53355 1430 aa38.18■■■■□ 3.7
CDKN1C-205ENST00000471157 KIF3BO15066 747 aa38.14■■■■□ 3.7
CDKN1C-205ENST00000471157 PPARGC1BQ86YN6 1023 aaKnown RBP38.14■■■■□ 3.7
CDKN1C-205ENST00000471157 C3P01024 1663 aa38.14■■■■□ 3.7
CDKN1C-205ENST00000471157 FAM50AQ14320 339 aaKnown RBP38.13■■■■□ 3.69
CDKN1C-205ENST00000471157 LMTK3Q96Q04 1460 aa38.12■■■■□ 3.69
CDKN1C-205ENST00000471157 PPP6R1Q9UPN7 881 aa38.12■■■■□ 3.69
CDKN1C-205ENST00000471157 MROH2AA6NES4 1674 aa38.11■■■■□ 3.69
CDKN1C-205ENST00000471157 CLTCQ00610 1675 aaKnown RBP38.09■■■■□ 3.69
CDKN1C-205ENST00000471157 DUOX2Q9NRD8 1548 aa38.05■■■■□ 3.68
CDKN1C-205ENST00000471157 ZMYM3Q14202 1370 aa38.05■■■■□ 3.68
CDKN1C-205ENST00000471157 KIF15Q9NS87 1388 aa38.04■■■■□ 3.68
CDKN1C-205ENST00000471157 PREX1Q8TCU6 1659 aa38.02■■■■□ 3.68
CDKN1C-205ENST00000471157 EIF2AK4Q9P2K8 1649 aaKnown RBP38.01■■■■□ 3.68
CDKN1C-205ENST00000471157 RRP7BPQ9NSQ0 103 aa38.01■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms