RNA–Protein interactions for RNA: ENST00000471157.2

CDKN1C-205, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

TSL 2

Gene CDKN1C, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-205ENST00000471157 NISCHQ9Y2I1 1504 aa60.26■■■■■ 7.24
CDKN1C-205ENST00000471157 CCDC180Q9P1Z9 1646 aa53.64■■■■■ 6.18
CDKN1C-205ENST00000471157 ABCC9O60706 1549 aa52.68■■■■■ 6.02
CDKN1C-205ENST00000471157 RB1CC1Q8TDY2 1594 aa50.6■■■■■ 5.69
CDKN1C-205ENST00000471157 NACADO15069 1562 aa50.49■■■■■ 5.67
CDKN1C-205ENST00000471157 DCAF8L2P0C7V8 631 aa50.45■■■■■ 5.67
CDKN1C-205ENST00000471157 ZCCHC6Q5VYS8 1495 aaKnown RBP50.16■■■■■ 5.62
CDKN1C-205ENST00000471157 MYO15BQ96JP2 1530 aa50.11■■■■■ 5.61
CDKN1C-205ENST00000471157 DCAF1Q9Y4B6 1507 aa49.84■■■■■ 5.57
CDKN1C-205ENST00000471157 UNC13AQ9UPW8 1703 aa49.4■■■■■ 5.5
CDKN1C-205ENST00000471157 PABPN1Q86U42 306 aaKnown RBP eCLIP49.19■■■■■ 5.47
CDKN1C-205ENST00000471157 BICRAQ9NZM4 1560 aa49.03■■■■■ 5.44
CDKN1C-205ENST00000471157 SCRIBQ14160 1630 aa48.96■■■■■ 5.43
CDKN1C-205ENST00000471157 SHROOM4Q9ULL8 1493 aa48.54■■■■■ 5.36
CDKN1C-205ENST00000471157 DNAJC5BQ9UF47 199 aa48.46■■■■■ 5.35
CDKN1C-205ENST00000471157 EIF4G1Q04637 1599 aaKnown RBP47.79■■■■■ 5.24
CDKN1C-205ENST00000471157 CC2D2AQ9P2K1 1620 aa47.63■■■■■ 5.22
CDKN1C-205ENST00000471157 CECR2Q9BXF3 1484 aa47.35■■■■■ 5.17
CDKN1C-205ENST00000471157 SMARCA4P51532 1647 aa46.79■■■■■ 5.08
CDKN1C-205ENST00000471157 BAZ1AQ9NRL2 1556 aaPredicted RBP46.73■■■■■ 5.07
CDKN1C-205ENST00000471157 ATAD2BQ9ULI0 1458 aa46.59■■■■■ 5.05
CDKN1C-205ENST00000471157 NCAPD3P42695 1498 aa46.57■■■■■ 5.05
CDKN1C-205ENST00000471157 SMARCA2P51531 1590 aa46.52■■■■■ 5.04
CDKN1C-205ENST00000471157 MROH2BQ7Z745 1585 aa46.43■■■■■ 5.02
CDKN1C-205ENST00000471157 HMGXB3Q12766 1538 aa46.34■■■■■ 5.01
CDKN1C-205ENST00000471157 PEG3Q9GZU2 1588 aa46.33■■■■■ 5.01
CDKN1C-205ENST00000471157 BAZ1BQ9UIG0 1483 aaKnown RBP46.21■■■■■ 4.99
CDKN1C-205ENST00000471157 WIZO95785 1651 aa45.92■■■■■ 4.94
CDKN1C-205ENST00000471157 RSF1Q96T23 1441 aaPredicted RBP45.84■■■■■ 4.93
CDKN1C-205ENST00000471157 NESP48681 1621 aa45.52■■■■■ 4.88
CDKN1C-205ENST00000471157 ERCC6Q03468 1493 aa45.44■■■■■ 4.87
CDKN1C-205ENST00000471157 TOP2AP11388 1531 aaKnown RBP45.44■■■■■ 4.86
CDKN1C-205ENST00000471157 LAMC3Q9Y6N6 1575 aa45.39■■■■■ 4.86
CDKN1C-205ENST00000471157 CADPSQ9ULU8 1353 aa45.22■■■■■ 4.83
CDKN1C-205ENST00000471157 PDS5BQ9NTI5 1447 aa45.1■■■■■ 4.81
CDKN1C-205ENST00000471157 CUX2O14529 1486 aa45■■■■■ 4.79
CDKN1C-205ENST00000471157 KIF21AQ7Z4S6 1674 aa44.98■■■■■ 4.79
CDKN1C-205ENST00000471157 CFTRP13569 1480 aa44.91■■■■■ 4.78
CDKN1C-205ENST00000471157 CCDC88BA6NC98 1476 aa44.9■■■■■ 4.78
CDKN1C-205ENST00000471157 THOC2Q8NI27 1593 aaKnown RBP44.87■■■■■ 4.77
CDKN1C-205ENST00000471157 FANCD2Q9BXW9 1451 aa44.72■■■■■ 4.75
CDKN1C-205ENST00000471157 CEP164Q9UPV0 1460 aa44.69■■■■■ 4.74
CDKN1C-205ENST00000471157 MRC2Q9UBG0 1479 aa44.66■■■■■ 4.74
CDKN1C-205ENST00000471157 SUPT5HO00267 1087 aaKnown RBP44.58■■■■■ 4.73
CDKN1C-205ENST00000471157 PRDM2Q13029 1718 aa44.55■■■■■ 4.72
CDKN1C-205ENST00000471157 WDR62O43379 1518 aa44.5■■■■■ 4.71
CDKN1C-205ENST00000471157 URB2Q14146 1524 aaKnown RBP44.27■■■■■ 4.68
CDKN1C-205ENST00000471157 TOPBP1Q92547 1522 aa43.98■■■■■ 4.63
CDKN1C-205ENST00000471157 ABCC8Q09428 1581 aa43.97■■■■■ 4.63
CDKN1C-205ENST00000471157 DNMBPQ6XZF7 1577 aa43.91■■■■■ 4.62
CDKN1C-205ENST00000471157 DNAJC5Q9H3Z4 198 aa43.8■■■■■ 4.6
CDKN1C-205ENST00000471157 IFT140Q96RY7 1462 aa43.75■■■■■ 4.59
CDKN1C-205ENST00000471157 POLA1P09884 1462 aaPredicted RBP43.59■■■■■ 4.57
CDKN1C-205ENST00000471157 CUX1P39880 1505 aa43.58■■■■■ 4.57
CDKN1C-205ENST00000471157 ZNF608Q9ULD9 1512 aaPredicted RBP43.56■■■■■ 4.56
CDKN1C-205ENST00000471157 TARBP1Q13395 1621 aaKnown RBP43.49■■■■■ 4.55
CDKN1C-205ENST00000471157 FGD5Q6ZNL6 1462 aa43.47■■■■■ 4.55
CDKN1C-205ENST00000471157 SOGA1O94964 1423 aa43.41■■■■■ 4.54
CDKN1C-205ENST00000471157 RAD54L2Q9Y4B4 1467 aa43.4■■■■■ 4.54
CDKN1C-205ENST00000471157 EIF4G3O43432 1585 aaKnown RBP43.39■■■■■ 4.54
CDKN1C-205ENST00000471157 AQRO60306 1485 aaKnown RBP eCLIP43.29■■■■■ 4.527e-8■■□□□ 13.4
CDKN1C-205ENST00000471157 WRNQ14191 1432 aaPredicted RBP eCLIP43.24■■■■■ 4.51
CDKN1C-205ENST00000471157 TDRD9Q8NDG6 1382 aaKnown RBP43.19■■■■■ 4.5
CDKN1C-205ENST00000471157 WDR97A6NE52 1622 aa43.15■■■■■ 4.5
CDKN1C-205ENST00000471157 TOP2BQ02880 1626 aa43.15■■■■■ 4.5
CDKN1C-205ENST00000471157 BIVM-ERCC5R4GMW8 1640 aa43.15■■■■■ 4.5
CDKN1C-205ENST00000471157 SYNJ1O43426 1573 aa43.14■■■■■ 4.5
CDKN1C-205ENST00000471157 OSCARQ8IYS5 282 aa43.1■■■■■ 4.49
CDKN1C-205ENST00000471157 ABCA10Q8WWZ4 1543 aa43.02■■■■■ 4.48
CDKN1C-205ENST00000471157 GRIN2BQ13224 1484 aa42.93■■■■■ 4.46
CDKN1C-205ENST00000471157 GAPVD1Q14C86 1478 aa42.91■■■■■ 4.46
CDKN1C-205ENST00000471157 SNAPC4Q5SXM2 1469 aa42.9■■■■■ 4.46
CDKN1C-205ENST00000471157 ABCA5Q8WWZ7 1642 aa42.87■■■■■ 4.45
CDKN1C-205ENST00000471157 CHD1O14646 1710 aa42.86■■■■■ 4.45
CDKN1C-205ENST00000471157 MAGI1Q96QZ7 1491 aaPredicted RBP42.83■■■■■ 4.45
CDKN1C-205ENST00000471157 FBLN2P98095 1184 aa42.83■■■■■ 4.45
CDKN1C-205ENST00000471157 PBRM1Q86U86 1689 aa42.82■■■■■ 4.45
CDKN1C-205ENST00000471157 CHMP7Q8WUX9 453 aaPredicted RBP42.68■■■■■ 4.42
CDKN1C-205ENST00000471157 SYNJ2O15056 1496 aa42.68■■■■■ 4.42
CDKN1C-205ENST00000471157 ERICH3Q5RHP9 1530 aa42.51■■■■■ 4.4
CDKN1C-205ENST00000471157 ADAMTS12P58397 1594 aa42.49■■■■■ 4.39
CDKN1C-205ENST00000471157 RIMBP3CA6NJZ7 1639 aa42.42■■■■■ 4.38
CDKN1C-205ENST00000471157 RIMBP3BA6NNM3 1639 aa42.42■■■■■ 4.38
CDKN1C-205ENST00000471157 RIMBP3Q9UFD9 1639 aa42.42■■■■■ 4.38
CDKN1C-205ENST00000471157 ARHGEF11O15085 1522 aa42.41■■■■■ 4.38
CDKN1C-205ENST00000471157 FHAD1B1AJZ9 1412 aa42.41■■■■■ 4.38
CDKN1C-205ENST00000471157 CLASP1Q7Z460 1538 aa42.4■■■■■ 4.38
CDKN1C-205ENST00000471157 GRIN2AQ12879 1464 aa42.38■■■■■ 4.38
CDKN1C-205ENST00000471157 KIF27Q86VH2 1401 aa42.37■■■■■ 4.37
CDKN1C-205ENST00000471157 TRIM41Q8WV44 630 aa42.35■■■■■ 4.37
CDKN1C-205ENST00000471157 NUP160Q12769 1436 aa42.19■■■■■ 4.34
CDKN1C-205ENST00000471157 IGF1RP08069 1367 aa42.18■■■■■ 4.34
CDKN1C-205ENST00000471157 CEP170Q5SW79 1584 aa42.17■■■■■ 4.34
CDKN1C-205ENST00000471157 CUL7Q14999 1698 aa42.1■■■■■ 4.33
CDKN1C-205ENST00000471157 ARAP1Q96P48 1450 aa42.05■■■■■ 4.32
CDKN1C-205ENST00000471157 CYB5RLQ6IPT4 315 aa42.03■■■■■ 4.32
CDKN1C-205ENST00000471157 CARMIL1Q5VZK9 1371 aa41.95■■■■■ 4.31
CDKN1C-205ENST00000471157 RUSC2Q8N2Y8 1516 aa41.9■■■■■ 4.3
CDKN1C-205ENST00000471157 SHROOM2Q13796 1616 aa41.87■■■■■ 4.29
CDKN1C-205ENST00000471157 ERCC6L2Q5T890 1561 aa41.8■■■■■ 4.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms