RNA–Protein interactions for RNA: ENST00000470904.5

KPNA1-205, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-205ENST00000470904 COL17A1Q9UMD9 1497 aaPredicted RBP8.87□□□□□ -0.99
KPNA1-205ENST00000470904 CFAP43Q8NDM7 1665 aa8.87□□□□□ -0.99
KPNA1-205ENST00000470904 FANCAO15360 1455 aa8.86□□□□□ -0.99
KPNA1-205ENST00000470904 PPRC1Q5VV67 1664 aaKnown RBP8.85□□□□□ -0.99
KPNA1-205ENST00000470904 EFCAB2Q5VUJ9 269 aa8.85□□□□□ -0.99
KPNA1-205ENST00000470904 CDC42BPAQ5VT25 1732 aa8.85□□□□□ -0.99
KPNA1-205ENST00000470904 CDC42BPBQ9Y5S2 1711 aa8.84□□□□□ -0.99
KPNA1-205ENST00000470904 EHBP1L1Q8N3D4 1523 aa8.84□□□□□ -0.99
KPNA1-205ENST00000470904 GPATCH8Q9UKJ3 1502 aaKnown RBP8.84□□□□□ -0.99
KPNA1-205ENST00000470904 MAP3K4Q9Y6R4 1608 aa8.84□□□□□ -0.99
KPNA1-205ENST00000470904 ABCA9Q8IUA7 1624 aa8.84□□□□□ -0.99
KPNA1-205ENST00000470904 MLECQ14165 292 aa8.84□□□□□ -0.99
KPNA1-205ENST00000470904 SUPT6HQ7KZ85 1726 aaKnown RBP8.84□□□□□ -1
KPNA1-205ENST00000470904 MYO5CQ9NQX4 1742 aa8.84□□□□□ -1
KPNA1-205ENST00000470904 SCAPERQ9BY12 1400 aa8.83□□□□□ -1
KPNA1-205ENST00000470904 ADGRL1O94910 1474 aa8.82□□□□□ -1
KPNA1-205ENST00000470904 PLCH2O75038 1416 aa8.82□□□□□ -1
KPNA1-205ENST00000470904 AKNAQ7Z591 1439 aa8.82□□□□□ -1
KPNA1-205ENST00000470904 KDM6BO15054 1643 aa8.81□□□□□ -1
KPNA1-205ENST00000470904 ARID4BQ4LE39 1312 aaPredicted RBP8.81□□□□□ -1
KPNA1-205ENST00000470904 SYCP2Q9BX26 1530 aa8.81□□□□□ -1
KPNA1-205ENST00000470904 TRAPPC8Q9Y2L5 1435 aa8.8□□□□□ -1
KPNA1-205ENST00000470904 ARHGEF12Q9NZN5 1544 aa8.8□□□□□ -1
KPNA1-205ENST00000470904 GLI2P10070 1586 aa8.8□□□□□ -1
KPNA1-205ENST00000470904 RRP7BPQ9NSQ0 103 aa8.79□□□□□ -1
KPNA1-205ENST00000470904 MYOM3Q5VTT5 1437 aa8.79□□□□□ -1
KPNA1-205ENST00000470904 PREX2Q70Z35 1606 aa8.79□□□□□ -1
KPNA1-205ENST00000470904 SAMD9LQ8IVG5 1584 aa8.78□□□□□ -1
KPNA1-205ENST00000470904 TEX14Q8IWB6 1497 aa8.78□□□□□ -1
KPNA1-205ENST00000470904 CAMSAP2Q08AD1 1489 aa8.77□□□□□ -1
KPNA1-205ENST00000470904 FGD6Q6ZV73 1430 aa8.77□□□□□ -1
KPNA1-205ENST00000470904 YEATS2Q9ULM3 1422 aa8.77□□□□□ -1
KPNA1-205ENST00000470904 DENND4BO75064 1496 aaPredicted RBP8.76□□□□□ -1.01
KPNA1-205ENST00000470904 SPAG9O60271 1321 aaKnown RBP8.76□□□□□ -1.01
KPNA1-205ENST00000470904 MAP3K1Q13233 1512 aa8.75□□□□□ -1.01
KPNA1-205ENST00000470904 TSPY4P0CV99 314 aa8.75□□□□□ -1.01
KPNA1-205ENST00000470904 TSPY10P0CW01 314 aa8.75□□□□□ -1.01
KPNA1-205ENST00000470904 PTPN23Q9H3S7 1636 aa8.74□□□□□ -1.01
KPNA1-205ENST00000470904 ITSN2Q9NZM3 1697 aa8.74□□□□□ -1.01
KPNA1-205ENST00000470904 NEUROD1Q13562 356 aa8.74□□□□□ -1.01
KPNA1-205ENST00000470904 GGT6Q6P531 493 aa8.74□□□□□ -1.01
KPNA1-205ENST00000470904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.74□□□□□ -1.012e-8■□□□□ 11
KPNA1-205ENST00000470904 ABCC1P33527 1531 aa8.73□□□□□ -1.01
KPNA1-205ENST00000470904 NEO1Q92859 1461 aa8.73□□□□□ -1.01
KPNA1-205ENST00000470904 POGZQ7Z3K3 1410 aa8.73□□□□□ -1.01
KPNA1-205ENST00000470904 FRMPD1Q5SYB0 1578 aa8.72□□□□□ -1.01
KPNA1-205ENST00000470904 PTPRKQ15262 1439 aa8.72□□□□□ -1.01
KPNA1-205ENST00000470904 RICTORQ6R327 1708 aa8.72□□□□□ -1.01
KPNA1-205ENST00000470904 MBD5Q9P267 1494 aa8.71□□□□□ -1.01
KPNA1-205ENST00000470904 CFAP65Q6ZU64 1925 aaKnown RBP8.71□□□□□ -1.01
KPNA1-205ENST00000470904 TRIM52Q96A61 297 aa8.71□□□□□ -1.02
KPNA1-205ENST00000470904 KIF3BO15066 747 aa8.7□□□□□ -1.02
KPNA1-205ENST00000470904 ZNF518AQ6AHZ1 1483 aa8.7□□□□□ -1.02
KPNA1-205ENST00000470904 ABCC5O15440 1437 aa8.7□□□□□ -1.02
KPNA1-205ENST00000470904 ZEB1P37275 1124 aaPredicted RBP8.7□□□□□ -1.02
KPNA1-205ENST00000470904 ARAP3Q8WWN8 1544 aa8.69□□□□□ -1.02
KPNA1-205ENST00000470904 CEBPAP49715 358 aaPredicted RBP8.69□□□□□ -1.02
KPNA1-205ENST00000470904 SENP3Q9H4L4 574 aaPredicted RBP8.69□□□□□ -1.02
KPNA1-205ENST00000470904 CCDC141Q6ZP82 1450 aa8.69□□□□□ -1.02
KPNA1-205ENST00000470904 SIN3AQ96ST3 1273 aa8.69□□□□□ -1.02
KPNA1-205ENST00000470904 SIGLEC1Q9BZZ2 1709 aa8.69□□□□□ -1.02
KPNA1-205ENST00000470904 DAPK1P53355 1430 aa8.68□□□□□ -1.02
KPNA1-205ENST00000470904 C9orf84Q5VXU9 1444 aa8.68□□□□□ -1.02
KPNA1-205ENST00000470904 MIA2Q96PC5 1412 aa8.68□□□□□ -1.02
KPNA1-205ENST00000470904 CFAP74Q9C0B2 1584 aa8.68□□□□□ -1.02
KPNA1-205ENST00000470904 FOXD1Q16676 465 aa8.68□□□□□ -1.02
KPNA1-205ENST00000470904 RAB3GAP2Q9H2M9 1393 aa8.68□□□□□ -1.02
KPNA1-205ENST00000470904 KIDINS220Q9ULH0 1771 aa8.68□□□□□ -1.02
KPNA1-205ENST00000470904 ABCA6Q8N139 1617 aa8.67□□□□□ -1.02
KPNA1-205ENST00000470904 ATP7AQ04656 1500 aa8.67□□□□□ -1.02
KPNA1-205ENST00000470904 ZFYVE16Q7Z3T8 1539 aa8.67□□□□□ -1.02
KPNA1-205ENST00000470904 RRBP1Q9P2E9 1410 aaKnown RBP8.66□□□□□ -1.02
KPNA1-205ENST00000470904 KIF15Q9NS87 1388 aa8.66□□□□□ -1.02
KPNA1-205ENST00000470904 HECW2Q9P2P5 1572 aa8.66□□□□□ -1.02
KPNA1-205ENST00000470904 KIAA1107Q9UPP5 1409 aa8.66□□□□□ -1.02
KPNA1-205ENST00000470904 PLEKHH2Q8IVE3 1493 aa8.65□□□□□ -1.02
KPNA1-205ENST00000470904 KDM4FA0A1W2PPD8 638 aa8.65□□□□□ -1.03
KPNA1-205ENST00000470904 DNMT1P26358 1616 aaKnown RBP8.64□□□□□ -1.03
KPNA1-205ENST00000470904 ESF1Q9H501 851 aaKnown RBP8.64□□□□□ -1.03
KPNA1-205ENST00000470904 KDM5CP41229 1560 aa8.64□□□□□ -1.03
KPNA1-205ENST00000470904 DIP2CQ9Y2E4 1556 aa8.64□□□□□ -1.03
KPNA1-205ENST00000470904 TCOF1Q13428 1488 aaKnown RBP8.63□□□□□ -1.03
KPNA1-205ENST00000470904 HIRIP3Q9BW71 556 aaPredicted RBP8.62□□□□□ -1.03
KPNA1-205ENST00000470904 ANKRD30AQ9BXX3 1397 aa8.62□□□□□ -1.03
KPNA1-205ENST00000470904 NCOA1Q15788 1441 aa8.62□□□□□ -1.03
KPNA1-205ENST00000470904 DHX57Q6P158 1386 aaKnown RBP8.62□□□□□ -1.03
KPNA1-205ENST00000470904 ATP10AO60312 1499 aa8.62□□□□□ -1.03
KPNA1-205ENST00000470904 A2MP01023 1474 aa8.62□□□□□ -1.03
KPNA1-205ENST00000470904 ARHGEF40Q8TER5 1519 aa8.62□□□□□ -1.03
KPNA1-205ENST00000470904 MLH3Q9UHC1 1453 aa8.62□□□□□ -1.03
KPNA1-205ENST00000470904 RSPH4AQ5TD94 716 aa8.62□□□□□ -1.03
KPNA1-205ENST00000470904 INO80Q9ULG1 1556 aaPredicted RBP8.61□□□□□ -1.03
KPNA1-205ENST00000470904 WASHC2CQ9Y4E1 1318 aa8.61□□□□□ -1.03
KPNA1-205ENST00000470904 FBXO31Q5XUX0 539 aaPredicted RBP8.61□□□□□ -1.03
KPNA1-205ENST00000470904 SETD5Q9C0A6 1442 aa8.61□□□□□ -1.03
KPNA1-205ENST00000470904 ARHGEF5Q12774 1597 aa8.6□□□□□ -1.03
KPNA1-205ENST00000470904 CROCC2H7BZ55 1655 aa8.6□□□□□ -1.03
KPNA1-205ENST00000470904 ADGBQ8N7X0 1667 aa8.6□□□□□ -1.03
KPNA1-205ENST00000470904 AEBP2Q6ZN18 517 aaPredicted RBP8.6□□□□□ -1.03
KPNA1-205ENST00000470904 ANKRD50Q9ULJ7 1429 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 301.2 ms