RNA–Protein interactions for RNA: ENST00000470478.1

SEC23IP-205, Transcript of SEC23 interacting protein, humanhuman

TSL 2

Gene SEC23IP, Length 285 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-205ENST00000470478 POGZQ7Z3K3 1410 aa20.74■□□□□ 0.91
SEC23IP-205ENST00000470478 PCF11O94913 1555 aaKnown RBP20.72■□□□□ 0.91
SEC23IP-205ENST00000470478 SCAPERQ9BY12 1400 aa20.72■□□□□ 0.91
SEC23IP-205ENST00000470478 MAGI2Q86UL8 1455 aa20.71■□□□□ 0.91
SEC23IP-205ENST00000470478 LMTK3Q96Q04 1460 aa20.71■□□□□ 0.91
SEC23IP-205ENST00000470478 ATP1B4Q9UN42 357 aaPredicted RBP20.71■□□□□ 0.91
SEC23IP-205ENST00000470478 TROQ12816 1431 aaPredicted RBP20.69■□□□□ 0.9
SEC23IP-205ENST00000470478 FER1L4A9Z1Z3 1794 aa20.67■□□□□ 0.9
SEC23IP-205ENST00000470478 CDC42BPBQ9Y5S2 1711 aa20.64■□□□□ 0.9
SEC23IP-205ENST00000470478 KDM5CP41229 1560 aa20.63■□□□□ 0.89
SEC23IP-205ENST00000470478 ARHGAP5Q13017 1502 aa20.63■□□□□ 0.89
SEC23IP-205ENST00000470478 EFCAB2Q5VUJ9 269 aa20.62■□□□□ 0.89
SEC23IP-205ENST00000470478 CDK11AQ9UQ88 783 aaPredicted RBP20.62■□□□□ 0.89
SEC23IP-205ENST00000470478 ATP10AO60312 1499 aa20.62■□□□□ 0.89
SEC23IP-205ENST00000470478 ARHGEF12Q9NZN5 1544 aa20.61■□□□□ 0.89
SEC23IP-205ENST00000470478 C9orf84Q5VXU9 1444 aa20.61■□□□□ 0.89
SEC23IP-205ENST00000470478 CLIP1P30622 1438 aa20.6■□□□□ 0.89
SEC23IP-205ENST00000470478 CASKIN1Q8WXD9 1431 aa20.6■□□□□ 0.89
SEC23IP-205ENST00000470478 PREX2Q70Z35 1606 aa20.6■□□□□ 0.89
SEC23IP-205ENST00000470478 ZNF518AQ6AHZ1 1483 aa20.59■□□□□ 0.89
SEC23IP-205ENST00000470478 MLECQ14165 292 aa20.59■□□□□ 0.89
SEC23IP-205ENST00000470478 PLPPR3Q6T4P5 718 aa20.57■□□□□ 0.88
SEC23IP-205ENST00000470478 DIP2CQ9Y2E4 1556 aa20.57■□□□□ 0.88
SEC23IP-205ENST00000470478 CCDC18Q5T9S5 1454 aa20.56■□□□□ 0.88
SEC23IP-205ENST00000470478 ABCC1P33527 1531 aa20.55■□□□□ 0.88
SEC23IP-205ENST00000470478 HSPA2P54652 639 aa20.55■□□□□ 0.88
SEC23IP-205ENST00000470478 ABCA6Q8N139 1617 aa20.55■□□□□ 0.88
SEC23IP-205ENST00000470478 CDC42BPAQ5VT25 1732 aa20.55■□□□□ 0.88
SEC23IP-205ENST00000470478 ITSN2Q9NZM3 1697 aa20.54■□□□□ 0.88
SEC23IP-205ENST00000470478 AFAP1Q8N556 730 aa20.54■□□□□ 0.88
SEC23IP-205ENST00000470478 REREQ9P2R6 1566 aa20.52■□□□□ 0.88
SEC23IP-205ENST00000470478 FYCO1Q9BQS8 1478 aa20.51■□□□□ 0.87
SEC23IP-205ENST00000470478 TRAPPC8Q9Y2L5 1435 aa20.51■□□□□ 0.87
SEC23IP-205ENST00000470478 MLH3Q9UHC1 1453 aa20.5■□□□□ 0.87
SEC23IP-205ENST00000470478 PREX1Q8TCU6 1659 aa20.49■□□□□ 0.87
SEC23IP-205ENST00000470478 FBXO41Q8TF61 875 aa20.49■□□□□ 0.87
SEC23IP-205ENST00000470478 KIDINS220Q9ULH0 1771 aa20.47■□□□□ 0.87
SEC23IP-205ENST00000470478 CEBPAP49715 358 aaPredicted RBP20.45■□□□□ 0.86
SEC23IP-205ENST00000470478 SAMD9LQ8IVG5 1584 aa20.45■□□□□ 0.86
SEC23IP-205ENST00000470478 AGLP35573 1532 aa20.43■□□□□ 0.86
SEC23IP-205ENST00000470478 C3P01024 1663 aa20.42■□□□□ 0.86
SEC23IP-205ENST00000470478 GPATCH8Q9UKJ3 1502 aaKnown RBP20.41■□□□□ 0.86
SEC23IP-205ENST00000470478 SYCP2Q9BX26 1530 aa20.4■□□□□ 0.86
SEC23IP-205ENST00000470478 MYT1LQ9UL68 1186 aa20.4■□□□□ 0.86
SEC23IP-205ENST00000470478 STRCQ7RTU9 1775 aa20.39■□□□□ 0.86
SEC23IP-205ENST00000470478 SETD1BQ9UPS6 1966 aaKnown RBP20.39■□□□□ 0.85
SEC23IP-205ENST00000470478 UHRF1BP1Q6BDS2 1440 aa20.34■□□□□ 0.85
SEC23IP-205ENST00000470478 INO80Q9ULG1 1556 aaPredicted RBP20.34■□□□□ 0.85
SEC23IP-205ENST00000470478 ZNF777Q9ULD5 760 aaPredicted RBP20.33■□□□□ 0.85
SEC23IP-205ENST00000470478 SUPT6HQ7KZ85 1726 aaKnown RBP20.31■□□□□ 0.84
SEC23IP-205ENST00000470478 ATP7AQ04656 1500 aa20.31■□□□□ 0.84
SEC23IP-205ENST00000470478 PLXNC1O60486 1568 aa20.29■□□□□ 0.84
SEC23IP-205ENST00000470478 TIAM1Q13009 1591 aa20.29■□□□□ 0.84
SEC23IP-205ENST00000470478 HNRNPMP52272 730 aaKnown RBP eCLIP20.29■□□□□ 0.84
SEC23IP-205ENST00000470478 MROH2AA6NES4 1674 aa20.29■□□□□ 0.84
SEC23IP-205ENST00000470478 KIAA1107Q9UPP5 1409 aa20.28■□□□□ 0.84
SEC23IP-205ENST00000470478 CERKQ8TCT0 537 aa20.28■□□□□ 0.84
SEC23IP-205ENST00000470478 CCNB3Q8WWL7 1395 aa20.27■□□□□ 0.84
SEC23IP-205ENST00000470478 CNTLNQ9NXG0 1405 aa20.27■□□□□ 0.83
SEC23IP-205ENST00000470478 SPAG9O60271 1321 aaKnown RBP20.27■□□□□ 0.83
SEC23IP-205ENST00000470478 PLEKHH2Q8IVE3 1493 aa20.26■□□□□ 0.83
SEC23IP-205ENST00000470478 MTUS2Q5JR59 1369 aa20.26■□□□□ 0.83
SEC23IP-205ENST00000470478 EHBP1L1Q8N3D4 1523 aa20.26■□□□□ 0.83
SEC23IP-205ENST00000470478 CFDP1Q9UEE9 299 aaPredicted RBP20.25■□□□□ 0.83
SEC23IP-205ENST00000470478 CLTCQ00610 1675 aaKnown RBP20.24■□□□□ 0.83
SEC23IP-205ENST00000470478 CEP162Q5TB80 1403 aa20.23■□□□□ 0.83
SEC23IP-205ENST00000470478 A2MP01023 1474 aa20.23■□□□□ 0.83
SEC23IP-205ENST00000470478 ESF1Q9H501 851 aaKnown RBP20.22■□□□□ 0.83
SEC23IP-205ENST00000470478 MBD5Q9P267 1494 aa20.21■□□□□ 0.83
SEC23IP-205ENST00000470478 ADGBQ8N7X0 1667 aa20.21■□□□□ 0.83
SEC23IP-205ENST00000470478 ZNF644Q9H582 1327 aaPredicted RBP20.21■□□□□ 0.83
SEC23IP-205ENST00000470478 NPATQ14207 1427 aa20.19■□□□□ 0.82
SEC23IP-205ENST00000470478 PTPRTO14522 1441 aa20.19■□□□□ 0.82
SEC23IP-205ENST00000470478 NCOA1Q15788 1441 aa20.19■□□□□ 0.82
SEC23IP-205ENST00000470478 ZMYM3Q14202 1370 aa20.18■□□□□ 0.82
SEC23IP-205ENST00000470478 DMRT2Q9Y5R5 561 aa20.17■□□□□ 0.82
SEC23IP-205ENST00000470478 MYO3AQ8NEV4 1616 aa20.16■□□□□ 0.82
SEC23IP-205ENST00000470478 CAMSAP1Q5T5Y3 1602 aa20.16■□□□□ 0.82
SEC23IP-205ENST00000470478 ZNF142P52746 1687 aaPredicted RBP20.16■□□□□ 0.82
SEC23IP-205ENST00000470478 LTBP4Q8N2S1 1624 aa20.15■□□□□ 0.82
SEC23IP-205ENST00000470478 NCOA2Q15596 1464 aa20.13■□□□□ 0.81
SEC23IP-205ENST00000470478 PTPRKQ15262 1439 aa20.13■□□□□ 0.81
SEC23IP-205ENST00000470478 RTEL1-TNFRSF6BF6WH68 1400 aa20.11■□□□□ 0.81
SEC23IP-205ENST00000470478 CAMSAP2Q08AD1 1489 aa20.11■□□□□ 0.81
SEC23IP-205ENST00000470478 CEP170BQ9Y4F5 1589 aaPredicted RBP20.1■□□□□ 0.81
SEC23IP-205ENST00000470478 GGT6Q6P531 493 aa20.1■□□□□ 0.81
SEC23IP-205ENST00000470478 CCDC141Q6ZP82 1450 aa20.09■□□□□ 0.81
SEC23IP-205ENST00000470478 DHX29Q7Z478 1369 aaKnown RBP20.07■□□□□ 0.8
SEC23IP-205ENST00000470478 PLA2R1Q13018 1463 aa20.05■□□□□ 0.8
SEC23IP-205ENST00000470478 NCKAP5LQ9HCH0 1330 aa20.04■□□□□ 0.8
SEC23IP-205ENST00000470478 TCOF1Q13428 1488 aaKnown RBP20.04■□□□□ 0.8
SEC23IP-205ENST00000470478 ARHGEF5Q12774 1597 aa20.04■□□□□ 0.8
SEC23IP-205ENST00000470478 PPP6R1Q9UPN7 881 aa20.03■□□□□ 0.8
SEC23IP-205ENST00000470478 VPS8Q8N3P4 1428 aa20.02■□□□□ 0.79
SEC23IP-205ENST00000470478 IQSEC2Q5JU85 1478 aa20.01■□□□□ 0.79
SEC23IP-205ENST00000470478 LRRC9Q6ZRR7 1453 aa20.01■□□□□ 0.79
SEC23IP-205ENST00000470478 DNMT1P26358 1616 aaKnown RBP20.01■□□□□ 0.79
SEC23IP-205ENST00000470478 KDM5DQ9BY66 1539 aa20■□□□□ 0.79
SEC23IP-205ENST00000470478 A2ML1A8K2U0 1454 aa19.99■□□□□ 0.79
SEC23IP-205ENST00000470478 FAM135AQ9P2D6 1515 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms