RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 EHBP1L1Q8N3D4 1523 aa23.62■■□□□ 1.37
CDC42SE1-203ENST00000470278 MADDQ8WXG6 1647 aa23.62■■□□□ 1.37
CDC42SE1-203ENST00000470278 PTPRMP28827 1452 aa23.59■■□□□ 1.37
CDC42SE1-203ENST00000470278 ZMYM4Q5VZL5 1548 aa23.56■■□□□ 1.36
CDC42SE1-203ENST00000470278 CFAP74Q9C0B2 1584 aa23.56■■□□□ 1.36
CDC42SE1-203ENST00000470278 MTUS2Q5JR59 1369 aa23.55■■□□□ 1.36
CDC42SE1-203ENST00000470278 LRRC9Q6ZRR7 1453 aa23.54■■□□□ 1.36
CDC42SE1-203ENST00000470278 FANCAO15360 1455 aa23.53■■□□□ 1.36
CDC42SE1-203ENST00000470278 MYO5CQ9NQX4 1742 aa23.52■■□□□ 1.36
CDC42SE1-203ENST00000470278 AKNAQ7Z591 1439 aa23.51■■□□□ 1.35
CDC42SE1-203ENST00000470278 RIMS1Q86UR5 1692 aaKnown RBP23.51■■□□□ 1.35
CDC42SE1-203ENST00000470278 DENND4BO75064 1496 aaPredicted RBP23.5■■□□□ 1.35
CDC42SE1-203ENST00000470278 SUPT6HQ7KZ85 1726 aaKnown RBP23.5■■□□□ 1.35
CDC42SE1-203ENST00000470278 PREX2Q70Z35 1606 aa23.48■■□□□ 1.35
CDC42SE1-203ENST00000470278 YEATS2Q9ULM3 1422 aa23.47■■□□□ 1.35
CDC42SE1-203ENST00000470278 CDC42BPAQ5VT25 1732 aa23.45■■□□□ 1.34
CDC42SE1-203ENST00000470278 LMTK3Q96Q04 1460 aa23.45■■□□□ 1.34
CDC42SE1-203ENST00000470278 PLCH2O75038 1416 aa23.45■■□□□ 1.34
CDC42SE1-203ENST00000470278 APLP2Q06481 763 aa23.45■■□□□ 1.34
CDC42SE1-203ENST00000470278 ZFYVE16Q7Z3T8 1539 aa23.43■■□□□ 1.34
CDC42SE1-203ENST00000470278 NCOA2Q15596 1464 aa23.43■■□□□ 1.34
CDC42SE1-203ENST00000470278 CDC42BPBQ9Y5S2 1711 aa23.42■■□□□ 1.34
CDC42SE1-203ENST00000470278 ITSN2Q9NZM3 1697 aa23.41■■□□□ 1.34
CDC42SE1-203ENST00000470278 POGZQ7Z3K3 1410 aa23.41■■□□□ 1.34
CDC42SE1-203ENST00000470278 KANK4Q5T7N3 995 aaPredicted RBP23.39■■□□□ 1.33
CDC42SE1-203ENST00000470278 GPATCH8Q9UKJ3 1502 aaKnown RBP23.38■■□□□ 1.33
CDC42SE1-203ENST00000470278 ARHGAP5Q13017 1502 aa23.38■■□□□ 1.33
CDC42SE1-203ENST00000470278 FER1L4A9Z1Z3 1794 aa23.37■■□□□ 1.33
CDC42SE1-203ENST00000470278 CCNB3Q8WWL7 1395 aa23.35■■□□□ 1.33
CDC42SE1-203ENST00000470278 MAGI2Q86UL8 1455 aa23.35■■□□□ 1.33
CDC42SE1-203ENST00000470278 SCAPERQ9BY12 1400 aa23.33■■□□□ 1.32
CDC42SE1-203ENST00000470278 KDM5CP41229 1560 aa23.31■■□□□ 1.32
CDC42SE1-203ENST00000470278 ARID4BQ4LE39 1312 aaPredicted RBP23.31■■□□□ 1.32
CDC42SE1-203ENST00000470278 ARHGEF12Q9NZN5 1544 aa23.3■■□□□ 1.32
CDC42SE1-203ENST00000470278 EFCAB2Q5VUJ9 269 aa23.3■■□□□ 1.32
CDC42SE1-203ENST00000470278 ABCC1P33527 1531 aa23.29■■□□□ 1.32
CDC42SE1-203ENST00000470278 SAMD9LQ8IVG5 1584 aa23.28■■□□□ 1.32
CDC42SE1-203ENST00000470278 MYOM3Q5VTT5 1437 aa23.26■■□□□ 1.31
CDC42SE1-203ENST00000470278 DIP2CQ9Y2E4 1556 aa23.25■■□□□ 1.31
CDC42SE1-203ENST00000470278 PLEKHH2Q8IVE3 1493 aa23.24■■□□□ 1.31
CDC42SE1-203ENST00000470278 ABCA6Q8N139 1617 aa23.24■■□□□ 1.31
CDC42SE1-203ENST00000470278 MIA2Q96PC5 1412 aa23.24■■□□□ 1.31
CDC42SE1-203ENST00000470278 ATP10AO60312 1499 aa23.24■■□□□ 1.31
CDC42SE1-203ENST00000470278 CFDP1Q9UEE9 299 aaPredicted RBP23.23■■□□□ 1.31
CDC42SE1-203ENST00000470278 C9orf84Q5VXU9 1444 aa23.22■■□□□ 1.31
CDC42SE1-203ENST00000470278 KIAA1107Q9UPP5 1409 aa23.21■■□□□ 1.31
CDC42SE1-203ENST00000470278 ZNF518AQ6AHZ1 1483 aa23.2■■□□□ 1.3
CDC42SE1-203ENST00000470278 REREQ9P2R6 1566 aa23.19■■□□□ 1.3
CDC42SE1-203ENST00000470278 SYCP2Q9BX26 1530 aa23.19■■□□□ 1.3
CDC42SE1-203ENST00000470278 CAMSAP2Q08AD1 1489 aa23.19■■□□□ 1.3
CDC42SE1-203ENST00000470278 PREX1Q8TCU6 1659 aa23.18■■□□□ 1.3
CDC42SE1-203ENST00000470278 HSPA2P54652 639 aa23.17■■□□□ 1.3
CDC42SE1-203ENST00000470278 FGD6Q6ZV73 1430 aa23.16■■□□□ 1.3
CDC42SE1-203ENST00000470278 KIDINS220Q9ULH0 1771 aa23.15■■□□□ 1.3
CDC42SE1-203ENST00000470278 FBXO41Q8TF61 875 aa23.14■■□□□ 1.29
CDC42SE1-203ENST00000470278 PTPN23Q9H3S7 1636 aa23.14■■□□□ 1.29
CDC42SE1-203ENST00000470278 TCOF1Q13428 1488 aaKnown RBP23.13■■□□□ 1.29
CDC42SE1-203ENST00000470278 MBD5Q9P267 1494 aa23.13■■□□□ 1.29
CDC42SE1-203ENST00000470278 MLECQ14165 292 aa23.13■■□□□ 1.29
CDC42SE1-203ENST00000470278 STRCQ7RTU9 1775 aa23.13■■□□□ 1.29
CDC42SE1-203ENST00000470278 TRAPPC8Q9Y2L5 1435 aa23.13■■□□□ 1.29
CDC42SE1-203ENST00000470278 ARHGEF5Q12774 1597 aa23.13■■□□□ 1.29
CDC42SE1-203ENST00000470278 AFAP1Q8N556 730 aa23.12■■□□□ 1.29
CDC42SE1-203ENST00000470278 ZNF777Q9ULD5 760 aaPredicted RBP23.12■■□□□ 1.29
CDC42SE1-203ENST00000470278 MLH3Q9UHC1 1453 aa23.11■■□□□ 1.29
CDC42SE1-203ENST00000470278 C3P01024 1663 aa23.11■■□□□ 1.29
CDC42SE1-203ENST00000470278 ZNF644Q9H582 1327 aaPredicted RBP23.09■■□□□ 1.29
CDC42SE1-203ENST00000470278 PLPPR3Q6T4P5 718 aa23.08■■□□□ 1.29
CDC42SE1-203ENST00000470278 AGLP35573 1532 aa23.08■■□□□ 1.28
CDC42SE1-203ENST00000470278 CCDC141Q6ZP82 1450 aa23.07■■□□□ 1.28
CDC42SE1-203ENST00000470278 INO80Q9ULG1 1556 aaPredicted RBP23.06■■□□□ 1.28
CDC42SE1-203ENST00000470278 SETD1BQ9UPS6 1966 aaKnown RBP23.04■■□□□ 1.28
CDC42SE1-203ENST00000470278 CEBPAP49715 358 aaPredicted RBP23.04■■□□□ 1.28
CDC42SE1-203ENST00000470278 HNRNPMP52272 730 aaKnown RBP eCLIP23.03■■□□□ 1.28
CDC42SE1-203ENST00000470278 RSPH4AQ5TD94 716 aa23.03■■□□□ 1.28
CDC42SE1-203ENST00000470278 PPARGC1BQ86YN6 1023 aaKnown RBP23.03■■□□□ 1.28
CDC42SE1-203ENST00000470278 DNMT1P26358 1616 aaKnown RBP23.03■■□□□ 1.28
CDC42SE1-203ENST00000470278 CROCC2H7BZ55 1655 aa23.03■■□□□ 1.28
CDC42SE1-203ENST00000470278 ATP7AQ04656 1500 aa23.01■■□□□ 1.27
CDC42SE1-203ENST00000470278 MAST1Q9Y2H9 1570 aa23.01■■□□□ 1.27
CDC42SE1-203ENST00000470278 RRBP1Q9P2E9 1410 aaKnown RBP23■■□□□ 1.27
CDC42SE1-203ENST00000470278 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23■■□□□ 1.27
CDC42SE1-203ENST00000470278 SHANK2Q9UPX8 1470 aa22.99■■□□□ 1.27
CDC42SE1-203ENST00000470278 RTEL1-TNFRSF6BF6WH68 1400 aa22.99■■□□□ 1.27
CDC42SE1-203ENST00000470278 SPAG9O60271 1321 aaKnown RBP22.96■■□□□ 1.27
CDC42SE1-203ENST00000470278 DAPK1P53355 1430 aa22.96■■□□□ 1.27
CDC42SE1-203ENST00000470278 PLXNC1O60486 1568 aa22.96■■□□□ 1.27
CDC42SE1-203ENST00000470278 MROH2AA6NES4 1674 aa22.94■■□□□ 1.26
CDC42SE1-203ENST00000470278 ABCC5O15440 1437 aa22.94■■□□□ 1.26
CDC42SE1-203ENST00000470278 ADGBQ8N7X0 1667 aa22.93■■□□□ 1.26
CDC42SE1-203ENST00000470278 UHRF1BP1Q6BDS2 1440 aa22.91■■□□□ 1.26
CDC42SE1-203ENST00000470278 TSPY4P0CV99 314 aa22.88■■□□□ 1.25
CDC42SE1-203ENST00000470278 TSPY10P0CW01 314 aa22.88■■□□□ 1.25
CDC42SE1-203ENST00000470278 FAM50AQ14320 339 aaKnown RBP22.88■■□□□ 1.25
CDC42SE1-203ENST00000470278 CERKQ8TCT0 537 aa22.87■■□□□ 1.25
CDC42SE1-203ENST00000470278 ADGRL2O95490 1459 aa22.86■■□□□ 1.25
CDC42SE1-203ENST00000470278 CLTCQ00610 1675 aaKnown RBP22.86■■□□□ 1.25
CDC42SE1-203ENST00000470278 A2MP01023 1474 aa22.84■■□□□ 1.25
CDC42SE1-203ENST00000470278 MYT1LQ9UL68 1186 aa22.83■■□□□ 1.25
CDC42SE1-203ENST00000470278 ZNF142P52746 1687 aaPredicted RBP22.83■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms