RNA–Protein interactions for RNA: ENST00000470179.5

PGAP1-208, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 2

Gene PGAP1, Length 2,874 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-208ENST00000470179 DDX10Q13206 875 aaKnown RBP24.08■■□□□ 1.45
PGAP1-208ENST00000470179 SIN3AQ96ST3 1273 aa24.05■■□□□ 1.44
PGAP1-208ENST00000470179 PHLDB1Q86UU1 1377 aa24.05■■□□□ 1.44
PGAP1-208ENST00000470179 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.04■■□□□ 1.44
PGAP1-208ENST00000470179 FKBP8Q14318 412 aa24.04■■□□□ 1.44
PGAP1-208ENST00000470179 ABCA9Q8IUA7 1624 aa24.03■■□□□ 1.44
PGAP1-208ENST00000470179 MYOM3Q5VTT5 1437 aa24.02■■□□□ 1.44
PGAP1-208ENST00000470179 TRIM52Q96A61 297 aa24.02■■□□□ 1.44
PGAP1-208ENST00000470179 RRBP1Q9P2E9 1410 aaKnown RBP24.01■■□□□ 1.43
PGAP1-208ENST00000470179 GLI2P10070 1586 aa24■■□□□ 1.43
PGAP1-208ENST00000470179 ITSN2Q9NZM3 1697 aa24■■□□□ 1.43
PGAP1-208ENST00000470179 TTC37Q6PGP7 1564 aa23.99■■□□□ 1.43
PGAP1-208ENST00000470179 MIA2Q96PC5 1412 aa23.99■■□□□ 1.43
PGAP1-208ENST00000470179 GPATCH8Q9UKJ3 1502 aaKnown RBP23.99■■□□□ 1.43
PGAP1-208ENST00000470179 CDC42BPAQ5VT25 1732 aa23.98■■□□□ 1.43
PGAP1-208ENST00000470179 CCNB3Q8WWL7 1395 aa23.97■■□□□ 1.43
PGAP1-208ENST00000470179 ARAP3Q8WWN8 1544 aa23.97■■□□□ 1.43
PGAP1-208ENST00000470179 PREX2Q70Z35 1606 aa23.96■■□□□ 1.43
PGAP1-208ENST00000470179 FGD6Q6ZV73 1430 aa23.95■■□□□ 1.42
PGAP1-208ENST00000470179 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.95■■□□□ 1.42
PGAP1-208ENST00000470179 MYO5CQ9NQX4 1742 aa23.94■■□□□ 1.42
PGAP1-208ENST00000470179 DIP2BQ9P265 1576 aa23.93■■□□□ 1.42
PGAP1-208ENST00000470179 TCOF1Q13428 1488 aaKnown RBP23.92■■□□□ 1.42
PGAP1-208ENST00000470179 PLCH2O75038 1416 aa23.91■■□□□ 1.42
PGAP1-208ENST00000470179 CDC42BPBQ9Y5S2 1711 aa23.91■■□□□ 1.42
PGAP1-208ENST00000470179 MAP3K4Q9Y6R4 1608 aa23.89■■□□□ 1.42
PGAP1-208ENST00000470179 PTPN23Q9H3S7 1636 aa23.88■■□□□ 1.41
PGAP1-208ENST00000470179 ANP32EQ9BTT0 268 aa23.88■■□□□ 1.41
PGAP1-208ENST00000470179 FAM50AQ14320 339 aaKnown RBP23.86■■□□□ 1.41
PGAP1-208ENST00000470179 KIF13AQ9H1H9 1805 aa23.84■■□□□ 1.41
PGAP1-208ENST00000470179 IRX6P78412 446 aaPredicted RBP23.84■■□□□ 1.41
PGAP1-208ENST00000470179 CFDP1Q9UEE9 299 aaPredicted RBP23.83■■□□□ 1.41
PGAP1-208ENST00000470179 RAB3GAP2Q9H2M9 1393 aa23.82■■□□□ 1.4
PGAP1-208ENST00000470179 CD109Q6YHK3 1445 aa23.82■■□□□ 1.4
PGAP1-208ENST00000470179 ARHGAP5Q13017 1502 aa23.8■■□□□ 1.4
PGAP1-208ENST00000470179 CAMSAP2Q08AD1 1489 aa23.79■■□□□ 1.4
PGAP1-208ENST00000470179 SAMD9LQ8IVG5 1584 aa23.79■■□□□ 1.4
PGAP1-208ENST00000470179 CFAP74Q9C0B2 1584 aa23.78■■□□□ 1.4
PGAP1-208ENST00000470179 PLEKHH2Q8IVE3 1493 aa23.78■■□□□ 1.4
PGAP1-208ENST00000470179 KIAA1107Q9UPP5 1409 aa23.77■■□□□ 1.4
PGAP1-208ENST00000470179 EFCAB2Q5VUJ9 269 aa23.77■■□□□ 1.4
PGAP1-208ENST00000470179 FAM69CQ0P6D2 419 aa23.76■■□□□ 1.39
PGAP1-208ENST00000470179 FANCAO15360 1455 aa23.75■■□□□ 1.39
PGAP1-208ENST00000470179 NEO1Q92859 1461 aa23.74■■□□□ 1.39
PGAP1-208ENST00000470179 CLSPNQ9HAW4 1339 aa23.74■■□□□ 1.39
PGAP1-208ENST00000470179 PPRC1Q5VV67 1664 aaKnown RBP23.74■■□□□ 1.39
PGAP1-208ENST00000470179 ARHGEF5Q12774 1597 aa23.74■■□□□ 1.39
PGAP1-208ENST00000470179 DNMT1P26358 1616 aaKnown RBP23.72■■□□□ 1.39
PGAP1-208ENST00000470179 ABCC1P33527 1531 aa23.72■■□□□ 1.39
PGAP1-208ENST00000470179 ZNF644Q9H582 1327 aaPredicted RBP23.71■■□□□ 1.39
PGAP1-208ENST00000470179 MBD5Q9P267 1494 aa23.71■■□□□ 1.39
PGAP1-208ENST00000470179 RBM19Q9Y4C8 960 aaKnown RBP23.7■■□□□ 1.38
PGAP1-208ENST00000470179 BCL11AQ9H165 835 aa23.69■■□□□ 1.38
PGAP1-208ENST00000470179 TEX14Q8IWB6 1497 aa23.68■■□□□ 1.38
PGAP1-208ENST00000470179 RSPH4AQ5TD94 716 aa23.68■■□□□ 1.38
PGAP1-208ENST00000470179 AKNAQ7Z591 1439 aa23.68■■□□□ 1.38
PGAP1-208ENST00000470179 CROCC2H7BZ55 1655 aa23.66■■□□□ 1.38
PGAP1-208ENST00000470179 ARHGEF12Q9NZN5 1544 aa23.66■■□□□ 1.38
PGAP1-208ENST00000470179 ABCC5O15440 1437 aa23.66■■□□□ 1.38
PGAP1-208ENST00000470179 DAPK1P53355 1430 aa23.66■■□□□ 1.38
PGAP1-208ENST00000470179 SYCP2Q9BX26 1530 aa23.66■■□□□ 1.38
PGAP1-208ENST00000470179 ZNF777Q9ULD5 760 aaPredicted RBP23.65■■□□□ 1.38
PGAP1-208ENST00000470179 SHANK2Q9UPX8 1470 aa23.64■■□□□ 1.38
PGAP1-208ENST00000470179 ADGRL1O94910 1474 aa23.63■■□□□ 1.37
PGAP1-208ENST00000470179 CCDC141Q6ZP82 1450 aa23.63■■□□□ 1.37
PGAP1-208ENST00000470179 PTPRKQ15262 1439 aa23.62■■□□□ 1.37
PGAP1-208ENST00000470179 MAST1Q9Y2H9 1570 aa23.61■■□□□ 1.37
PGAP1-208ENST00000470179 TSPOAP1O95153 1857 aa23.6■■□□□ 1.37
PGAP1-208ENST00000470179 PPP1R15AO75807 674 aaPredicted RBP23.59■■□□□ 1.37
PGAP1-208ENST00000470179 SCAPERQ9BY12 1400 aa23.58■■□□□ 1.37
PGAP1-208ENST00000470179 ADGRL2O95490 1459 aa23.58■■□□□ 1.37
PGAP1-208ENST00000470179 ROCK1Q13464 1354 aa23.58■■□□□ 1.36
PGAP1-208ENST00000470179 HNRNPMP52272 730 aaKnown RBP eCLIP23.58■■□□□ 1.36
PGAP1-208ENST00000470179 MSH5O43196 834 aa23.57■■□□□ 1.36
PGAP1-208ENST00000470179 SENP3-EIF4A1A0A087X0R7 540 aa23.57■■□□□ 1.36
PGAP1-208ENST00000470179 NEFLP07196 543 aa23.56■■□□□ 1.36
PGAP1-208ENST00000470179 TRAPPC8Q9Y2L5 1435 aa23.56■■□□□ 1.36
PGAP1-208ENST00000470179 CNGB1Q14028 1251 aaPredicted RBP23.55■■□□□ 1.36
PGAP1-208ENST00000470179 ADGBQ8N7X0 1667 aa23.55■■□□□ 1.36
PGAP1-208ENST00000470179 KDM5CP41229 1560 aa23.55■■□□□ 1.36
PGAP1-208ENST00000470179 POGZQ7Z3K3 1410 aa23.55■■□□□ 1.36
PGAP1-208ENST00000470179 ZNF518AQ6AHZ1 1483 aa23.54■■□□□ 1.36
PGAP1-208ENST00000470179 RTEL1-TNFRSF6BF6WH68 1400 aa23.53■■□□□ 1.36
PGAP1-208ENST00000470179 DENND4BO75064 1496 aaPredicted RBP23.53■■□□□ 1.36
PGAP1-208ENST00000470179 C9orf84Q5VXU9 1444 aa23.52■■□□□ 1.36
PGAP1-208ENST00000470179 RICTORQ6R327 1708 aa23.52■■□□□ 1.36
PGAP1-208ENST00000470179 HFM1A2PYH4 1435 aa23.5■■□□□ 1.35
PGAP1-208ENST00000470179 PLXNC1O60486 1568 aa23.5■■□□□ 1.35
PGAP1-208ENST00000470179 ANP32CO43423 234 aa23.5■■□□□ 1.35
PGAP1-208ENST00000470179 TSPY4P0CV99 314 aa23.5■■□□□ 1.35
PGAP1-208ENST00000470179 TSPY10P0CW01 314 aa23.5■■□□□ 1.35
PGAP1-208ENST00000470179 INO80Q9ULG1 1556 aaPredicted RBP23.49■■□□□ 1.35
PGAP1-208ENST00000470179 NCOA1Q15788 1441 aa23.49■■□□□ 1.35
PGAP1-208ENST00000470179 SETD5Q9C0A6 1442 aa23.49■■□□□ 1.35
PGAP1-208ENST00000470179 FRMPD1Q5SYB0 1578 aa23.48■■□□□ 1.35
PGAP1-208ENST00000470179 TRHP20396 242 aaPredicted RBP23.48■■□□□ 1.35
PGAP1-208ENST00000470179 MLH3Q9UHC1 1453 aa23.47■■□□□ 1.35
PGAP1-208ENST00000470179 GCC2Q8IWJ2 1684 aa23.47■■□□□ 1.35
PGAP1-208ENST00000470179 ZMYM4Q5VZL5 1548 aa23.47■■□□□ 1.35
PGAP1-208ENST00000470179 ZFYVE16Q7Z3T8 1539 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms