RNA–Protein interactions for RNA: ENST00000469704.1

SNX5-206, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 696 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-206ENST00000469704 ZMYM4Q5VZL5 1548 aa42.62■■■■■ 4.41
SNX5-206ENST00000469704 MAGI2Q86UL8 1455 aa42.61■■■■■ 4.41
SNX5-206ENST00000469704 CDC42BPBQ9Y5S2 1711 aa42.6■■■■■ 4.41
SNX5-206ENST00000469704 POGZQ7Z3K3 1410 aa42.59■■■■■ 4.41
SNX5-206ENST00000469704 PREX2Q70Z35 1606 aa42.55■■■■■ 4.4
SNX5-206ENST00000469704 ARHGEF40Q8TER5 1519 aa42.55■■■■■ 4.4
SNX5-206ENST00000469704 MTUS2Q5JR59 1369 aa42.51■■■■■ 4.4
SNX5-206ENST00000469704 CDC42BPAQ5VT25 1732 aa42.49■■■■■ 4.39
SNX5-206ENST00000469704 ZFYVE16Q7Z3T8 1539 aa42.48■■■■■ 4.39
SNX5-206ENST00000469704 ZNF518AQ6AHZ1 1483 aa42.47■■■■■ 4.39
SNX5-206ENST00000469704 ARID4BQ4LE39 1312 aaPredicted RBP42.46■■■■■ 4.39
SNX5-206ENST00000469704 YEATS2Q9ULM3 1422 aa42.44■■■■■ 4.38
SNX5-206ENST00000469704 GPATCH8Q9UKJ3 1502 aaKnown RBP42.41■■■■■ 4.38
SNX5-206ENST00000469704 AFAP1Q8N556 730 aa42.41■■■■■ 4.38
SNX5-206ENST00000469704 ADAMTSL3P82987 1691 aa42.39■■■■■ 4.38
SNX5-206ENST00000469704 VPS8Q8N3P4 1428 aa42.37■■■■■ 4.37
SNX5-206ENST00000469704 BCORL1Q5H9F3 1711 aa42.37■■■■■ 4.37
SNX5-206ENST00000469704 KDM5CP41229 1560 aa42.37■■■■■ 4.37
SNX5-206ENST00000469704 ABCC1P33527 1531 aa42.36■■■■■ 4.37
SNX5-206ENST00000469704 EHBP1L1Q8N3D4 1523 aa42.36■■■■■ 4.37
SNX5-206ENST00000469704 CCNB3Q8WWL7 1395 aa42.35■■■■■ 4.37
SNX5-206ENST00000469704 ATP10AO60312 1499 aa42.33■■■■■ 4.37
SNX5-206ENST00000469704 ARHGEF12Q9NZN5 1544 aa42.31■■■■■ 4.36
SNX5-206ENST00000469704 CFDP1Q9UEE9 299 aaPredicted RBP42.31■■■■■ 4.36
SNX5-206ENST00000469704 ZNF777Q9ULD5 760 aaPredicted RBP42.3■■■■■ 4.36
SNX5-206ENST00000469704 ITSN2Q9NZM3 1697 aa42.28■■■■■ 4.36
SNX5-206ENST00000469704 TRAPPC8Q9Y2L5 1435 aa42.28■■■■■ 4.36
SNX5-206ENST00000469704 MLH3Q9UHC1 1453 aa42.27■■■■■ 4.36
SNX5-206ENST00000469704 SAMD9LQ8IVG5 1584 aa42.24■■■■■ 4.35
SNX5-206ENST00000469704 HECW2Q9P2P5 1572 aa42.24■■■■■ 4.35
SNX5-206ENST00000469704 C9orf84Q5VXU9 1444 aa42.24■■■■■ 4.35
SNX5-206ENST00000469704 MYT1LQ9UL68 1186 aa42.24■■■■■ 4.35
SNX5-206ENST00000469704 TIAM1Q13009 1591 aa42.23■■■■■ 4.35
SNX5-206ENST00000469704 PTPRMP28827 1452 aa42.22■■■■■ 4.35
SNX5-206ENST00000469704 KIAA1107Q9UPP5 1409 aa42.21■■■■■ 4.35
SNX5-206ENST00000469704 SIGLEC1Q9BZZ2 1709 aa42.21■■■■■ 4.35
SNX5-206ENST00000469704 PLEKHH2Q8IVE3 1493 aa42.21■■■■■ 4.35
SNX5-206ENST00000469704 MADDQ8WXG6 1647 aa42.18■■■■■ 4.34
SNX5-206ENST00000469704 HNRNPMP52272 730 aaKnown RBP eCLIP42.16■■■■■ 4.344e-7■■□□□ 12
SNX5-206ENST00000469704 MAP3K1Q13233 1512 aa42.15■■■■■ 4.34
SNX5-206ENST00000469704 SUPT6HQ7KZ85 1726 aaKnown RBP42.15■■■■■ 4.34
SNX5-206ENST00000469704 SYCP2Q9BX26 1530 aa42.13■■■■■ 4.33
SNX5-206ENST00000469704 DIP2CQ9Y2E4 1556 aa42.12■■■■■ 4.33
SNX5-206ENST00000469704 REREQ9P2R6 1566 aa42.11■■■■■ 4.33
SNX5-206ENST00000469704 NCOA2Q15596 1464 aa42.11■■■■■ 4.33
SNX5-206ENST00000469704 LRRC9Q6ZRR7 1453 aa42.09■■■■■ 4.33
SNX5-206ENST00000469704 MLECQ14165 292 aa42.08■■■■■ 4.33
SNX5-206ENST00000469704 KIDINS220Q9ULH0 1771 aa42.08■■■■■ 4.33
SNX5-206ENST00000469704 ABCA6Q8N139 1617 aa42.06■■■■■ 4.32
SNX5-206ENST00000469704 SPAG9O60271 1321 aaKnown RBP42.05■■■■■ 4.32
SNX5-206ENST00000469704 RIMS1Q86UR5 1692 aaKnown RBP42.05■■■■■ 4.32
SNX5-206ENST00000469704 ZNF644Q9H582 1327 aaPredicted RBP42.02■■■■■ 4.32
SNX5-206ENST00000469704 AGLP35573 1532 aa41.98■■■■■ 4.31
SNX5-206ENST00000469704 KANK4Q5T7N3 995 aaPredicted RBP41.97■■■■■ 4.31
SNX5-206ENST00000469704 FER1L4A9Z1Z3 1794 aa41.96■■■■■ 4.31
SNX5-206ENST00000469704 MBD5Q9P267 1494 aa41.96■■■■■ 4.31
SNX5-206ENST00000469704 APLP2Q06481 763 aa41.94■■■■■ 4.3
SNX5-206ENST00000469704 RSPH4AQ5TD94 716 aa41.92■■■■■ 4.3
SNX5-206ENST00000469704 ATP7AQ04656 1500 aa41.91■■■■■ 4.3
SNX5-206ENST00000469704 INO80Q9ULG1 1556 aaPredicted RBP41.88■■■■■ 4.3
SNX5-206ENST00000469704 CAMSAP2Q08AD1 1489 aa41.85■■■■■ 4.29
SNX5-206ENST00000469704 RTEL1-TNFRSF6BF6WH68 1400 aa41.84■■■■■ 4.29
SNX5-206ENST00000469704 CCDC141Q6ZP82 1450 aa41.78■■■■■ 4.28
SNX5-206ENST00000469704 PLPPR3Q6T4P5 718 aa41.77■■■■■ 4.28
SNX5-206ENST00000469704 A2MP01023 1474 aa41.77■■■■■ 4.28
SNX5-206ENST00000469704 ESF1Q9H501 851 aaKnown RBP41.76■■■■■ 4.28
SNX5-206ENST00000469704 MIA2Q96PC5 1412 aa41.75■■■■■ 4.27
SNX5-206ENST00000469704 MYOM3Q5VTT5 1437 aa41.74■■■■■ 4.27
SNX5-206ENST00000469704 ADGBQ8N7X0 1667 aa41.73■■■■■ 4.27
SNX5-206ENST00000469704 PLXNC1O60486 1568 aa41.72■■■■■ 4.27
SNX5-206ENST00000469704 ARHGEF5Q12774 1597 aa41.72■■■■■ 4.27
SNX5-206ENST00000469704 LMTK3Q96Q04 1460 aa41.7■■■■■ 4.27
SNX5-206ENST00000469704 TSPY4P0CV99 314 aa41.69■■■■■ 4.26
SNX5-206ENST00000469704 TSPY10P0CW01 314 aa41.69■■■■■ 4.26
SNX5-206ENST00000469704 CEBPAP49715 358 aaPredicted RBP41.68■■■■■ 4.26
SNX5-206ENST00000469704 CNTLNQ9NXG0 1405 aa41.67■■■■■ 4.26
SNX5-206ENST00000469704 SETD1BQ9UPS6 1966 aaKnown RBP41.65■■■■■ 4.26
SNX5-206ENST00000469704 DHX29Q7Z478 1369 aaKnown RBP41.63■■■■■ 4.26
SNX5-206ENST00000469704 PPP6R1Q9UPN7 881 aa41.61■■■■■ 4.25
SNX5-206ENST00000469704 C3P01024 1663 aa41.57■■■■■ 4.25
SNX5-206ENST00000469704 GGT6Q6P531 493 aa41.56■■■■■ 4.24
SNX5-206ENST00000469704 MROH2AA6NES4 1674 aa41.52■■■■■ 4.24
SNX5-206ENST00000469704 PREX1Q8TCU6 1659 aa41.52■■■■■ 4.24
SNX5-206ENST00000469704 MAST1Q9Y2H9 1570 aa41.5■■■■■ 4.23
SNX5-206ENST00000469704 ZMYM3Q14202 1370 aa41.49■■■■■ 4.23
SNX5-206ENST00000469704 HSPA2P54652 639 aa41.47■■■■■ 4.23
SNX5-206ENST00000469704 KIF3BO15066 747 aa41.45■■■■■ 4.23
SNX5-206ENST00000469704 PTPN23Q9H3S7 1636 aa41.44■■■■■ 4.22
SNX5-206ENST00000469704 UHRF1BP1Q6BDS2 1440 aa41.43■■■■■ 4.22
SNX5-206ENST00000469704 FGD6Q6ZV73 1430 aa41.43■■■■■ 4.22
SNX5-206ENST00000469704 CLTCQ00610 1675 aaKnown RBP41.42■■■■■ 4.22
SNX5-206ENST00000469704 NPATQ14207 1427 aa41.39■■■■■ 4.22
SNX5-206ENST00000469704 TCOF1Q13428 1488 aaKnown RBP41.39■■■■■ 4.22
SNX5-206ENST00000469704 ABCC5O15440 1437 aa41.34■■■■■ 4.21
SNX5-206ENST00000469704 SHANK2Q9UPX8 1470 aa41.32■■■■■ 4.2
SNX5-206ENST00000469704 FAM135AQ9P2D6 1515 aa41.32■■■■■ 4.2
SNX5-206ENST00000469704 DAPK1P53355 1430 aa41.27■■■■■ 4.2
SNX5-206ENST00000469704 CROCC2H7BZ55 1655 aa41.26■■■■■ 4.2
SNX5-206ENST00000469704 DNMT1P26358 1616 aaKnown RBP41.26■■■■■ 4.2
SNX5-206ENST00000469704 PTPRKQ15262 1439 aa41.26■■■■■ 4.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms