RNA–Protein interactions for RNA: ENST00000469641.5

ATP13A1-205, Transcript of ATPase 13A1, human

TSL 2

Gene ATP13A1, Length 4,241 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP13A1-205	ENST00000469641	SAFB2	Q14151	953 aa	Known RBP eCLIP	14.06	□□□□□ -0.16
ATP13A1-205	ENST00000469641	NUTM2D	Q5VT03	806 aa	Predicted RBP	14.06	□□□□□ -0.16
ATP13A1-205	ENST00000469641	CANX	P27824	592 aa	Known RBP	14.05	□□□□□ -0.16
ATP13A1-205	ENST00000469641	PPP4R2	Q9NY27	417 aa		14.05	□□□□□ -0.16
ATP13A1-205	ENST00000469641	L3MBTL2	Q969R5	705 aa		14.04	□□□□□ -0.16
ATP13A1-205	ENST00000469641	KIF3B	O15066	747 aa		14.04	□□□□□ -0.16
ATP13A1-205	ENST00000469641	EFCAB2	Q5VUJ9	269 aa		14.04	□□□□□ -0.16
ATP13A1-205	ENST00000469641	NEFM	P07197	916 aa		14.02	□□□□□ -0.16
ATP13A1-205	ENST00000469641	HSPA5	P11021	654 aa	Known RBP	14.01	□□□□□ -0.17
ATP13A1-205	ENST00000469641	TNNT2	P45379	298 aa	Predicted RBP	14.01	□□□□□ -0.17
ATP13A1-205	ENST00000469641	ZNF608	Q9ULD9	1512 aa	Predicted RBP	13.98	□□□□□ -0.17
ATP13A1-205	ENST00000469641	GRIN2B	Q13224	1484 aa		13.98	□□□□□ -0.17
ATP13A1-205	ENST00000469641	MRC2	Q9UBG0	1479 aa		13.98	□□□□□ -0.17
ATP13A1-205	ENST00000469641	URB2	Q14146	1524 aa	Known RBP	13.97	□□□□□ -0.17
ATP13A1-205	ENST00000469641	PEG3	Q9GZU2	1588 aa		13.96	□□□□□ -0.17
ATP13A1-205	ENST00000469641	CC2D1B	Q5T0F9	858 aa	Known RBP	13.96	□□□□□ -0.17
ATP13A1-205	ENST00000469641	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.95	□□□□□ -0.18
ATP13A1-205	ENST00000469641	AFAP1	Q8N556	730 aa		13.95	□□□□□ -0.18
ATP13A1-205	ENST00000469641	STK26	Q9P289	416 aa		13.95	□□□□□ -0.18
ATP13A1-205	ENST00000469641	SNAPC4	Q5SXM2	1469 aa		13.95	□□□□□ -0.18
ATP13A1-205	ENST00000469641	SPAG9	O60271	1321 aa	Known RBP	13.94	□□□□□ -0.18
ATP13A1-205	ENST00000469641	CCDC18	Q5T9S5	1454 aa		13.94	□□□□□ -0.18
ATP13A1-205	ENST00000469641	LRRC9	Q6ZRR7	1453 aa		13.94	□□□□□ -0.18
ATP13A1-205	ENST00000469641	ANKRD30A	Q9BXX3	1397 aa		13.92	□□□□□ -0.18
ATP13A1-205	ENST00000469641	PPM1G	O15355	546 aa	Predicted RBP	13.92	□□□□□ -0.18
ATP13A1-205	ENST00000469641	PRG4	Q92954	1404 aa	Predicted RBP	13.91	□□□□□ -0.18
ATP13A1-205	ENST00000469641	ERICH6B	Q5W0A0	696 aa		13.91	□□□□□ -0.18
ATP13A1-205	ENST00000469641	DNMBP	Q6XZF7	1577 aa		13.91	□□□□□ -0.18
ATP13A1-205	ENST00000469641	UPF2	Q9HAU5	1272 aa	Known RBP	13.9	□□□□□ -0.18
ATP13A1-205	ENST00000469641	PRDM2	Q13029	1718 aa		13.9	□□□□□ -0.18
ATP13A1-205	ENST00000469641	FGD6	Q6ZV73	1430 aa		13.9	□□□□□ -0.18
ATP13A1-205	ENST00000469641	NEUROD2	Q15784	382 aa		13.9	□□□□□ -0.18
ATP13A1-205	ENST00000469641	ZBTB7C	A1YPR0	619 aa		13.89	□□□□□ -0.19
ATP13A1-205	ENST00000469641	C14orf37	Q86TY3	774 aa		13.88	□□□□□ -0.19
ATP13A1-205	ENST00000469641	HSP90AA1	P07900	732 aa	Known RBP	13.88	□□□□□ -0.19
ATP13A1-205	ENST00000469641	ANP32B	Q92688	251 aa	Known RBP	13.87	□□□□□ -0.19
ATP13A1-205	ENST00000469641	DDRGK1	Q96HY6	314 aa		13.87	□□□□□ -0.19
ATP13A1-205	ENST00000469641	NCOA2	Q15596	1464 aa		13.87	□□□□□ -0.19
ATP13A1-205	ENST00000469641	ABCA10	Q8WWZ4	1543 aa		13.87	□□□□□ -0.19
ATP13A1-205	ENST00000469641	SOX12	O15370	315 aa		13.86	□□□□□ -0.19
ATP13A1-205	ENST00000469641	CASKIN1	Q8WXD9	1431 aa		13.86	□□□□□ -0.19
ATP13A1-205	ENST00000469641	IFT140	Q96RY7	1462 aa		13.86	□□□□□ -0.19
ATP13A1-205	ENST00000469641	WDR43	Q15061	677 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
ATP13A1-205	ENST00000469641	WDR97	A6NE52	1622 aa		13.86	□□□□□ -0.19
ATP13A1-205	ENST00000469641	POGK	Q9P215	609 aa		13.85	□□□□□ -0.19
ATP13A1-205	ENST00000469641	KNSTRN	Q9Y448	316 aa		13.85	□□□□□ -0.19
ATP13A1-205	ENST00000469641	MYOM3	Q5VTT5	1437 aa		13.84	□□□□□ -0.19
ATP13A1-205	ENST00000469641	WASHC2C	Q9Y4E1	1318 aa		13.84	□□□□□ -0.19
ATP13A1-205	ENST00000469641	TIAM1	Q13009	1591 aa		13.84	□□□□□ -0.19
ATP13A1-205	ENST00000469641	FAM69C	Q0P6D2	419 aa		13.83	□□□□□ -0.19
ATP13A1-205	ENST00000469641	CDK13	Q14004	1512 aa	Known RBP	13.83	□□□□□ -0.2
ATP13A1-205	ENST00000469641	LAMC3	Q9Y6N6	1575 aa		13.82	□□□□□ -0.2
ATP13A1-205	ENST00000469641	ST20-MTHFS	A0A0A6YYL1	179 aa		13.82	□□□□□ -0.2
ATP13A1-205	ENST00000469641	NUTM2F	A1L443	756 aa		13.82	□□□□□ -0.2
ATP13A1-205	ENST00000469641	UACA	Q9BZF9	1416 aa		13.81	□□□□□ -0.2
ATP13A1-205	ENST00000469641	PLB1	Q6P1J6	1458 aa		13.8	□□□□□ -0.2
ATP13A1-205	ENST00000469641	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.8	□□□□□ -0.2
ATP13A1-205	ENST00000469641	KANK1	Q14678	1352 aa		13.8	□□□□□ -0.2
ATP13A1-205	ENST00000469641	FANCI	Q9NVI1	1328 aa		13.79	□□□□□ -0.2
ATP13A1-205	ENST00000469641	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.79	□□□□□ -0.2
ATP13A1-205	ENST00000469641	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.79	□□□□□ -0.2
ATP13A1-205	ENST00000469641	LMOD2	Q6P5Q4	547 aa		13.78	□□□□□ -0.2
ATP13A1-205	ENST00000469641	ROCK2	O75116	1388 aa	Known RBP	13.78	□□□□□ -0.2
ATP13A1-205	ENST00000469641	TRAK1	Q9UPV9	953 aa		13.78	□□□□□ -0.2
ATP13A1-205	ENST00000469641	SRPK2	P78362	688 aa	Known RBP	13.78	□□□□□ -0.2
ATP13A1-205	ENST00000469641	RAPGEF3	O95398	923 aa		13.77	□□□□□ -0.21
ATP13A1-205	ENST00000469641	RGS3	P49796	1198 aa		13.76	□□□□□ -0.21
ATP13A1-205	ENST00000469641	KIF15	Q9NS87	1388 aa		13.76	□□□□□ -0.21
ATP13A1-205	ENST00000469641	BIVM-ERCC5	R4GMW8	1640 aa		13.76	□□□□□ -0.21
ATP13A1-205	ENST00000469641	TMF1	P82094	1093 aa		13.75	□□□□□ -0.21
ATP13A1-205	ENST00000469641	WASHC2A	Q641Q2	1341 aa		13.75	□□□□□ -0.21
ATP13A1-205	ENST00000469641	MAPKBP1	O60336	1514 aa		13.75	□□□□□ -0.21
ATP13A1-205	ENST00000469641	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.75	□□□□□ -0.21
ATP13A1-205	ENST00000469641	MAP3K1	Q13233	1512 aa		13.75	□□□□□ -0.21
ATP13A1-205	ENST00000469641	RSPH4A	Q5TD94	716 aa		13.74	□□□□□ -0.21
ATP13A1-205	ENST00000469641	FYCO1	Q9BQS8	1478 aa		13.74	□□□□□ -0.21
ATP13A1-205	ENST00000469641	TRIM44	Q96DX7	344 aa	Predicted RBP	13.73	□□□□□ -0.21
ATP13A1-205	ENST00000469641	IPO9	Q96P70	1041 aa	Known RBP	13.73	□□□□□ -0.21
ATP13A1-205	ENST00000469641	ZBED9	Q6R2W3	1325 aa		13.73	□□□□□ -0.21
ATP13A1-205	ENST00000469641	BECN1	Q14457	450 aa		13.73	□□□□□ -0.21
ATP13A1-205	ENST00000469641	KIAA0586	Q9BVV6	1533 aa		13.72	□□□□□ -0.21
ATP13A1-205	ENST00000469641	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
ATP13A1-205	ENST00000469641	U2SURP	O15042	1029 aa	Known RBP	13.71	□□□□□ -0.22
ATP13A1-205	ENST00000469641	NUDC	Q9Y266	331 aa		13.71	□□□□□ -0.22
ATP13A1-205	ENST00000469641	ANKRD50	Q9ULJ7	1429 aa		13.7	□□□□□ -0.22
ATP13A1-205	ENST00000469641	HFM1	A2PYH4	1435 aa		13.7	□□□□□ -0.22
ATP13A1-205	ENST00000469641	PCF11	O94913	1555 aa	Known RBP	13.69	□□□□□ -0.22
ATP13A1-205	ENST00000469641	GRIN2A	Q12879	1464 aa		13.69	□□□□□ -0.22
ATP13A1-205	ENST00000469641		A0A0G2JS52	829 aa		13.69	□□□□□ -0.22
ATP13A1-205	ENST00000469641	EPRS	P07814	1512 aa	Known RBP	13.69	□□□□□ -0.22
ATP13A1-205	ENST00000469641	NBPF8	Q3BBV2	869 aa		13.69	□□□□□ -0.22
ATP13A1-205	ENST00000469641	CCDC144A	A2RUR9	1427 aa		13.68	□□□□□ -0.22
ATP13A1-205	ENST00000469641	CNTLN	Q9NXG0	1405 aa		13.68	□□□□□ -0.22
ATP13A1-205	ENST00000469641	CCDC7	Q96M83	1385 aa		13.68	□□□□□ -0.22
ATP13A1-205	ENST00000469641	CDCA8	Q53HL2	280 aa		13.68	□□□□□ -0.22
ATP13A1-205	ENST00000469641	NBPF1	Q3BBV0	1214 aa		13.67	□□□□□ -0.22
ATP13A1-205	ENST00000469641	TMEM132E	Q6IEE7	984 aa		13.67	□□□□□ -0.22
ATP13A1-205	ENST00000469641	SYNJ2	O15056	1496 aa		13.66	□□□□□ -0.22
ATP13A1-205	ENST00000469641	ARHGEF11	O15085	1522 aa		13.66	□□□□□ -0.22
ATP13A1-205	ENST00000469641	TRO	Q12816	1431 aa	Predicted RBP	13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms