RNA–Protein interactions for RNA: ENST00000469641.5

ATP13A1-205, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 4,241 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-205ENST00000469641 SAFB2Q14151 953 aaKnown RBP eCLIP14.06□□□□□ -0.16
ATP13A1-205ENST00000469641 NUTM2DQ5VT03 806 aaPredicted RBP14.06□□□□□ -0.16
ATP13A1-205ENST00000469641 CANXP27824 592 aaKnown RBP14.05□□□□□ -0.16
ATP13A1-205ENST00000469641 PPP4R2Q9NY27 417 aa14.05□□□□□ -0.16
ATP13A1-205ENST00000469641 L3MBTL2Q969R5 705 aa14.04□□□□□ -0.16
ATP13A1-205ENST00000469641 KIF3BO15066 747 aa14.04□□□□□ -0.16
ATP13A1-205ENST00000469641 EFCAB2Q5VUJ9 269 aa14.04□□□□□ -0.16
ATP13A1-205ENST00000469641 NEFMP07197 916 aa14.02□□□□□ -0.16
ATP13A1-205ENST00000469641 HSPA5P11021 654 aaKnown RBP14.01□□□□□ -0.17
ATP13A1-205ENST00000469641 TNNT2P45379 298 aaPredicted RBP14.01□□□□□ -0.17
ATP13A1-205ENST00000469641 ZNF608Q9ULD9 1512 aaPredicted RBP13.98□□□□□ -0.17
ATP13A1-205ENST00000469641 GRIN2BQ13224 1484 aa13.98□□□□□ -0.17
ATP13A1-205ENST00000469641 MRC2Q9UBG0 1479 aa13.98□□□□□ -0.17
ATP13A1-205ENST00000469641 URB2Q14146 1524 aaKnown RBP13.97□□□□□ -0.17
ATP13A1-205ENST00000469641 PEG3Q9GZU2 1588 aa13.96□□□□□ -0.17
ATP13A1-205ENST00000469641 CC2D1BQ5T0F9 858 aaKnown RBP13.96□□□□□ -0.17
ATP13A1-205ENST00000469641 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.95□□□□□ -0.18
ATP13A1-205ENST00000469641 AFAP1Q8N556 730 aa13.95□□□□□ -0.18
ATP13A1-205ENST00000469641 STK26Q9P289 416 aa13.95□□□□□ -0.18
ATP13A1-205ENST00000469641 SNAPC4Q5SXM2 1469 aa13.95□□□□□ -0.18
ATP13A1-205ENST00000469641 SPAG9O60271 1321 aaKnown RBP13.94□□□□□ -0.18
ATP13A1-205ENST00000469641 CCDC18Q5T9S5 1454 aa13.94□□□□□ -0.18
ATP13A1-205ENST00000469641 LRRC9Q6ZRR7 1453 aa13.94□□□□□ -0.18
ATP13A1-205ENST00000469641 ANKRD30AQ9BXX3 1397 aa13.92□□□□□ -0.18
ATP13A1-205ENST00000469641 PPM1GO15355 546 aaPredicted RBP13.92□□□□□ -0.18
ATP13A1-205ENST00000469641 PRG4Q92954 1404 aaPredicted RBP13.91□□□□□ -0.18
ATP13A1-205ENST00000469641 ERICH6BQ5W0A0 696 aa13.91□□□□□ -0.18
ATP13A1-205ENST00000469641 DNMBPQ6XZF7 1577 aa13.91□□□□□ -0.18
ATP13A1-205ENST00000469641 UPF2Q9HAU5 1272 aaKnown RBP13.9□□□□□ -0.18
ATP13A1-205ENST00000469641 PRDM2Q13029 1718 aa13.9□□□□□ -0.18
ATP13A1-205ENST00000469641 FGD6Q6ZV73 1430 aa13.9□□□□□ -0.18
ATP13A1-205ENST00000469641 NEUROD2Q15784 382 aa13.9□□□□□ -0.18
ATP13A1-205ENST00000469641 ZBTB7CA1YPR0 619 aa13.89□□□□□ -0.19
ATP13A1-205ENST00000469641 C14orf37Q86TY3 774 aa13.88□□□□□ -0.19
ATP13A1-205ENST00000469641 HSP90AA1P07900 732 aaKnown RBP13.88□□□□□ -0.19
ATP13A1-205ENST00000469641 ANP32BQ92688 251 aaKnown RBP13.87□□□□□ -0.19
ATP13A1-205ENST00000469641 DDRGK1Q96HY6 314 aa13.87□□□□□ -0.19
ATP13A1-205ENST00000469641 NCOA2Q15596 1464 aa13.87□□□□□ -0.19
ATP13A1-205ENST00000469641 ABCA10Q8WWZ4 1543 aa13.87□□□□□ -0.19
ATP13A1-205ENST00000469641 SOX12O15370 315 aa13.86□□□□□ -0.19
ATP13A1-205ENST00000469641 CASKIN1Q8WXD9 1431 aa13.86□□□□□ -0.19
ATP13A1-205ENST00000469641 IFT140Q96RY7 1462 aa13.86□□□□□ -0.19
ATP13A1-205ENST00000469641 WDR43Q15061 677 aaKnown RBP eCLIP13.86□□□□□ -0.19
ATP13A1-205ENST00000469641 WDR97A6NE52 1622 aa13.86□□□□□ -0.19
ATP13A1-205ENST00000469641 POGKQ9P215 609 aa13.85□□□□□ -0.19
ATP13A1-205ENST00000469641 KNSTRNQ9Y448 316 aa13.85□□□□□ -0.19
ATP13A1-205ENST00000469641 MYOM3Q5VTT5 1437 aa13.84□□□□□ -0.19
ATP13A1-205ENST00000469641 WASHC2CQ9Y4E1 1318 aa13.84□□□□□ -0.19
ATP13A1-205ENST00000469641 TIAM1Q13009 1591 aa13.84□□□□□ -0.19
ATP13A1-205ENST00000469641 FAM69CQ0P6D2 419 aa13.83□□□□□ -0.19
ATP13A1-205ENST00000469641 CDK13Q14004 1512 aaKnown RBP13.83□□□□□ -0.2
ATP13A1-205ENST00000469641 LAMC3Q9Y6N6 1575 aa13.82□□□□□ -0.2
ATP13A1-205ENST00000469641 ST20-MTHFSA0A0A6YYL1 179 aa13.82□□□□□ -0.2
ATP13A1-205ENST00000469641 NUTM2FA1L443 756 aa13.82□□□□□ -0.2
ATP13A1-205ENST00000469641 UACAQ9BZF9 1416 aa13.81□□□□□ -0.2
ATP13A1-205ENST00000469641 PLB1Q6P1J6 1458 aa13.8□□□□□ -0.2
ATP13A1-205ENST00000469641 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.8□□□□□ -0.2
ATP13A1-205ENST00000469641 KANK1Q14678 1352 aa13.8□□□□□ -0.2
ATP13A1-205ENST00000469641 FANCIQ9NVI1 1328 aa13.79□□□□□ -0.2
ATP13A1-205ENST00000469641 NAP1L5Q96NT1 182 aaPredicted RBP13.79□□□□□ -0.2
ATP13A1-205ENST00000469641 PRKRIP1Q9H875 184 aaPredicted RBP13.79□□□□□ -0.2
ATP13A1-205ENST00000469641 LMOD2Q6P5Q4 547 aa13.78□□□□□ -0.2
ATP13A1-205ENST00000469641 ROCK2O75116 1388 aaKnown RBP13.78□□□□□ -0.2
ATP13A1-205ENST00000469641 TRAK1Q9UPV9 953 aa13.78□□□□□ -0.2
ATP13A1-205ENST00000469641 SRPK2P78362 688 aaKnown RBP13.78□□□□□ -0.2
ATP13A1-205ENST00000469641 RAPGEF3O95398 923 aa13.77□□□□□ -0.21
ATP13A1-205ENST00000469641 RGS3P49796 1198 aa13.76□□□□□ -0.21
ATP13A1-205ENST00000469641 KIF15Q9NS87 1388 aa13.76□□□□□ -0.21
ATP13A1-205ENST00000469641 BIVM-ERCC5R4GMW8 1640 aa13.76□□□□□ -0.21
ATP13A1-205ENST00000469641 TMF1P82094 1093 aa13.75□□□□□ -0.21
ATP13A1-205ENST00000469641 WASHC2AQ641Q2 1341 aa13.75□□□□□ -0.21
ATP13A1-205ENST00000469641 MAPKBP1O60336 1514 aa13.75□□□□□ -0.21
ATP13A1-205ENST00000469641 ANO8Q9HCE9 1232 aaPredicted RBP13.75□□□□□ -0.21
ATP13A1-205ENST00000469641 MAP3K1Q13233 1512 aa13.75□□□□□ -0.21
ATP13A1-205ENST00000469641 RSPH4AQ5TD94 716 aa13.74□□□□□ -0.21
ATP13A1-205ENST00000469641 FYCO1Q9BQS8 1478 aa13.74□□□□□ -0.21
ATP13A1-205ENST00000469641 TRIM44Q96DX7 344 aaPredicted RBP13.73□□□□□ -0.21
ATP13A1-205ENST00000469641 IPO9Q96P70 1041 aaKnown RBP13.73□□□□□ -0.21
ATP13A1-205ENST00000469641 ZBED9Q6R2W3 1325 aa13.73□□□□□ -0.21
ATP13A1-205ENST00000469641 BECN1Q14457 450 aa13.73□□□□□ -0.21
ATP13A1-205ENST00000469641 KIAA0586Q9BVV6 1533 aa13.72□□□□□ -0.21
ATP13A1-205ENST00000469641 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.71□□□□□ -0.21
ATP13A1-205ENST00000469641 U2SURPO15042 1029 aaKnown RBP13.71□□□□□ -0.22
ATP13A1-205ENST00000469641 NUDCQ9Y266 331 aa13.71□□□□□ -0.22
ATP13A1-205ENST00000469641 ANKRD50Q9ULJ7 1429 aa13.7□□□□□ -0.22
ATP13A1-205ENST00000469641 HFM1A2PYH4 1435 aa13.7□□□□□ -0.22
ATP13A1-205ENST00000469641 PCF11O94913 1555 aaKnown RBP13.69□□□□□ -0.22
ATP13A1-205ENST00000469641 GRIN2AQ12879 1464 aa13.69□□□□□ -0.22
ATP13A1-205ENST00000469641 A0A0G2JS52 829 aa13.69□□□□□ -0.22
ATP13A1-205ENST00000469641 EPRSP07814 1512 aaKnown RBP13.69□□□□□ -0.22
ATP13A1-205ENST00000469641 NBPF8Q3BBV2 869 aa13.69□□□□□ -0.22
ATP13A1-205ENST00000469641 CCDC144AA2RUR9 1427 aa13.68□□□□□ -0.22
ATP13A1-205ENST00000469641 CNTLNQ9NXG0 1405 aa13.68□□□□□ -0.22
ATP13A1-205ENST00000469641 CCDC7Q96M83 1385 aa13.68□□□□□ -0.22
ATP13A1-205ENST00000469641 CDCA8Q53HL2 280 aa13.68□□□□□ -0.22
ATP13A1-205ENST00000469641 NBPF1Q3BBV0 1214 aa13.67□□□□□ -0.22
ATP13A1-205ENST00000469641 TMEM132EQ6IEE7 984 aa13.67□□□□□ -0.22
ATP13A1-205ENST00000469641 SYNJ2O15056 1496 aa13.66□□□□□ -0.22
ATP13A1-205ENST00000469641 ARHGEF11O15085 1522 aa13.66□□□□□ -0.22
ATP13A1-205ENST00000469641 TROQ12816 1431 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms