RNA–Protein interactions for RNA: ENST00000468892.5

ABCF3-207, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 1,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-207ENST00000468892 PREX2Q70Z35 1606 aa27.73■■■□□ 2.03
ABCF3-207ENST00000468892 DAPK1P53355 1430 aa27.73■■■□□ 2.03
ABCF3-207ENST00000468892 PTPRKQ15262 1439 aa27.72■■■□□ 2.03
ABCF3-207ENST00000468892 CLSPNQ9HAW4 1339 aa27.71■■■□□ 2.03
ABCF3-207ENST00000468892 ACIN1Q9UKV3 1341 aaKnown RBP27.71■■■□□ 2.03
ABCF3-207ENST00000468892 ZNF644Q9H582 1327 aaPredicted RBP27.7■■■□□ 2.02
ABCF3-207ENST00000468892 MYO5CQ9NQX4 1742 aa27.69■■■□□ 2.02
ABCF3-207ENST00000468892 ROCK1Q13464 1354 aa27.69■■■□□ 2.02
ABCF3-207ENST00000468892 TTC37Q6PGP7 1564 aa27.68■■■□□ 2.02
ABCF3-207ENST00000468892 ABCC5O15440 1437 aa27.68■■■□□ 2.02
ABCF3-207ENST00000468892 RSPH4AQ5TD94 716 aa27.67■■■□□ 2.02
ABCF3-207ENST00000468892 ASXL2Q76L83 1435 aa27.67■■■□□ 2.02
ABCF3-207ENST00000468892 RIMBP3CA6NJZ7 1639 aa27.66■■■□□ 2.02
ABCF3-207ENST00000468892 RIMBP3BA6NNM3 1639 aa27.66■■■□□ 2.02
ABCF3-207ENST00000468892 RIMBP3Q9UFD9 1639 aa27.66■■■□□ 2.02
ABCF3-207ENST00000468892 ARHGAP5Q13017 1502 aa27.65■■■□□ 2.02
ABCF3-207ENST00000468892 PLEKHH2Q8IVE3 1493 aa27.65■■■□□ 2.02
ABCF3-207ENST00000468892 PLCH2O75038 1416 aa27.64■■■□□ 2.02
ABCF3-207ENST00000468892 CDC42BPBQ9Y5S2 1711 aa27.64■■■□□ 2.02
ABCF3-207ENST00000468892 NAIPQ13075 1403 aa27.63■■■□□ 2.01
ABCF3-207ENST00000468892 DHX57Q6P158 1386 aaKnown RBP27.63■■■□□ 2.01
ABCF3-207ENST00000468892 ARAP3Q8WWN8 1544 aa27.62■■■□□ 2.01
ABCF3-207ENST00000468892 EFCAB2Q5VUJ9 269 aa27.61■■■□□ 2.01
ABCF3-207ENST00000468892 CHIC2Q9UKJ5 165 aa27.61■■■□□ 2.01
ABCF3-207ENST00000468892 ARHGEF5Q12774 1597 aa27.6■■■□□ 2.01
ABCF3-207ENST00000468892 GCC2Q8IWJ2 1684 aa27.59■■■□□ 2.01
ABCF3-207ENST00000468892 SHANK2Q9UPX8 1470 aa27.59■■■□□ 2.01
ABCF3-207ENST00000468892 CYB5RLQ6IPT4 315 aa27.59■■■□□ 2.01
ABCF3-207ENST00000468892 KIAA1107Q9UPP5 1409 aa27.58■■■□□ 2.01
ABCF3-207ENST00000468892 TSPY4P0CV99 314 aa27.58■■■□□ 2.01
ABCF3-207ENST00000468892 TSPY10P0CW01 314 aa27.58■■■□□ 2.01
ABCF3-207ENST00000468892 RRP7BPQ9NSQ0 103 aa27.57■■■□□ 2
ABCF3-207ENST00000468892 ABCA9Q8IUA7 1624 aa27.57■■■□□ 2
ABCF3-207ENST00000468892 SAMD9LQ8IVG5 1584 aa27.56■■■□□ 2
ABCF3-207ENST00000468892 CROCC2H7BZ55 1655 aa27.56■■■□□ 2
ABCF3-207ENST00000468892 ANKRD30AQ9BXX3 1397 aa27.55■■■□□ 2
ABCF3-207ENST00000468892 ADGBQ8N7X0 1667 aa27.55■■■□□ 2
ABCF3-207ENST00000468892 ADGRL2O95490 1459 aa27.54■■■□□ 2
ABCF3-207ENST00000468892 CCDC141Q6ZP82 1450 aa27.52■■■□□ 2
ABCF3-207ENST00000468892 MBD5Q9P267 1494 aa27.51■■□□□ 1.99
ABCF3-207ENST00000468892 HNRNPMP52272 730 aaKnown RBP eCLIP27.5■■□□□ 1.99
ABCF3-207ENST00000468892 MAPKBP1O60336 1514 aa27.5■■□□□ 1.99
ABCF3-207ENST00000468892 C9orf84Q5VXU9 1444 aa27.5■■□□□ 1.99
ABCF3-207ENST00000468892 NCOA1Q15788 1441 aa27.49■■□□□ 1.99
ABCF3-207ENST00000468892 SYCP2Q9BX26 1530 aa27.46■■□□□ 1.99
ABCF3-207ENST00000468892 MAST1Q9Y2H9 1570 aa27.41■■□□□ 1.98
ABCF3-207ENST00000468892 ABCC1P33527 1531 aa27.41■■□□□ 1.98
ABCF3-207ENST00000468892 FANCAO15360 1455 aa27.41■■□□□ 1.98
ABCF3-207ENST00000468892 CD109Q6YHK3 1445 aa27.39■■□□□ 1.97
ABCF3-207ENST00000468892 CFAP74Q9C0B2 1584 aa27.38■■□□□ 1.97
ABCF3-207ENST00000468892 TRIM52Q96A61 297 aa27.37■■□□□ 1.97
ABCF3-207ENST00000468892 ANKRD50Q9ULJ7 1429 aa27.34■■□□□ 1.97
ABCF3-207ENST00000468892 KIF15Q9NS87 1388 aa27.33■■□□□ 1.97
ABCF3-207ENST00000468892 ARHGEF12Q9NZN5 1544 aa27.32■■□□□ 1.96
ABCF3-207ENST00000468892 GLI2P10070 1586 aa27.31■■□□□ 1.96
ABCF3-207ENST00000468892 ADGRL1O94910 1474 aa27.3■■□□□ 1.96
ABCF3-207ENST00000468892 KDM6BO15054 1643 aa27.3■■□□□ 1.96
ABCF3-207ENST00000468892 RTEL1-TNFRSF6BF6WH68 1400 aa27.29■■□□□ 1.96
ABCF3-207ENST00000468892 PLXNC1O60486 1568 aa27.29■■□□□ 1.96
ABCF3-207ENST00000468892 SCAPERQ9BY12 1400 aa27.26■■□□□ 1.95
ABCF3-207ENST00000468892 SPAG9O60271 1321 aaKnown RBP27.26■■□□□ 1.95
ABCF3-207ENST00000468892 TRAPPC8Q9Y2L5 1435 aa27.25■■□□□ 1.95
ABCF3-207ENST00000468892 NEO1Q92859 1461 aa27.25■■□□□ 1.95
ABCF3-207ENST00000468892 TIMELESSQ9UNS1 1208 aa27.24■■□□□ 1.95
ABCF3-207ENST00000468892 MPHOSPH9Q99550 1183 aa27.23■■□□□ 1.95
ABCF3-207ENST00000468892 DUOX2Q9NRD8 1548 aa27.22■■□□□ 1.95
ABCF3-207ENST00000468892 MAP3K4Q9Y6R4 1608 aa27.21■■□□□ 1.95
ABCF3-207ENST00000468892 ZNF518AQ6AHZ1 1483 aa27.19■■□□□ 1.94
ABCF3-207ENST00000468892 AFAP1Q8N556 730 aa27.18■■□□□ 1.94
ABCF3-207ENST00000468892 FAM69CQ0P6D2 419 aa27.17■■□□□ 1.94
ABCF3-207ENST00000468892 SLC4A1APQ9BWU0 796 aaKnown RBP27.17■■□□□ 1.94
ABCF3-207ENST00000468892 ERBINQ96RT1 1412 aa27.16■■□□□ 1.94
ABCF3-207ENST00000468892 DIP2BQ9P265 1576 aa27.16■■□□□ 1.94
ABCF3-207ENST00000468892 ZFYVE16Q7Z3T8 1539 aa27.14■■□□□ 1.94
ABCF3-207ENST00000468892 ATP7AQ04656 1500 aa27.13■■□□□ 1.93
ABCF3-207ENST00000468892 KDM5DQ9BY66 1539 aa27.13■■□□□ 1.93
ABCF3-207ENST00000468892 INO80Q9ULG1 1556 aaPredicted RBP27.12■■□□□ 1.93
ABCF3-207ENST00000468892 NUP155O75694 1391 aa27.12■■□□□ 1.93
ABCF3-207ENST00000468892 MYT1LQ9UL68 1186 aa27.11■■□□□ 1.93
ABCF3-207ENST00000468892 POGZQ7Z3K3 1410 aa27.11■■□□□ 1.93
ABCF3-207ENST00000468892 NEUROD1Q13562 356 aa27.1■■□□□ 1.93
ABCF3-207ENST00000468892 PZPP20742 1482 aa27.1■■□□□ 1.93
ABCF3-207ENST00000468892 DENND4BO75064 1496 aaPredicted RBP27.09■■□□□ 1.93
ABCF3-207ENST00000468892 TEX14Q8IWB6 1497 aa27.09■■□□□ 1.93
ABCF3-207ENST00000468892 SIN3AQ96ST3 1273 aa27.09■■□□□ 1.93
ABCF3-207ENST00000468892 KDM5CP41229 1560 aa27.05■■□□□ 1.92
ABCF3-207ENST00000468892 UNC13BO14795 1591 aa27.05■■□□□ 1.92
ABCF3-207ENST00000468892 MLH3Q9UHC1 1453 aa27.04■■□□□ 1.92
ABCF3-207ENST00000468892 TONSLQ96HA7 1378 aa27.03■■□□□ 1.92
ABCF3-207ENST00000468892 ANKRD30BQ9BXX2 1392 aa27.01■■□□□ 1.91
ABCF3-207ENST00000468892 PKD2Q13563 968 aa27■■□□□ 1.91
ABCF3-207ENST00000468892 DHX29Q7Z478 1369 aaKnown RBP27■■□□□ 1.91
ABCF3-207ENST00000468892 HECW2Q9P2P5 1572 aa26.99■■□□□ 1.91
ABCF3-207ENST00000468892 KIDINS220Q9ULH0 1771 aa26.98■■□□□ 1.91
ABCF3-207ENST00000468892 FAM135AQ9P2D6 1515 aa26.97■■□□□ 1.91
ABCF3-207ENST00000468892 EIF2AK4Q9P2K8 1649 aaKnown RBP26.97■■□□□ 1.91
ABCF3-207ENST00000468892 MAGI2Q86UL8 1455 aa26.96■■□□□ 1.91
ABCF3-207ENST00000468892 IQGAP3Q86VI3 1631 aa26.94■■□□□ 1.9
ABCF3-207ENST00000468892 KANK1Q14678 1352 aa26.94■■□□□ 1.9
ABCF3-207ENST00000468892 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms