RNA–Protein interactions for RNA: ENST00000468860.1

ABCD3-204, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 3

Gene ABCD3, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-204ENST00000468860 LOC105371045A0A1W2PR82 267 aa29.1■■■□□ 2.25
ABCD3-204ENST00000468860 SCAPERQ9BY12 1400 aa29.09■■■□□ 2.25
ABCD3-204ENST00000468860 ARHGEF40Q8TER5 1519 aa29.09■■■□□ 2.25
ABCD3-204ENST00000468860 PREX2Q70Z35 1606 aa29.09■■■□□ 2.25
ABCD3-204ENST00000468860 POGZQ7Z3K3 1410 aa29.06■■■□□ 2.24
ABCD3-204ENST00000468860 CDC42BPAQ5VT25 1732 aa29.04■■■□□ 2.24
ABCD3-204ENST00000468860 MAGI2Q86UL8 1455 aa29.02■■■□□ 2.24
ABCD3-204ENST00000468860 ZFYVE16Q7Z3T8 1539 aa29.01■■■□□ 2.23
ABCD3-204ENST00000468860 YEATS2Q9ULM3 1422 aa28.96■■■□□ 2.23
ABCD3-204ENST00000468860 MTUS2Q5JR59 1369 aa28.96■■■□□ 2.23
ABCD3-204ENST00000468860 ZNF518AQ6AHZ1 1483 aa28.96■■■□□ 2.23
ABCD3-204ENST00000468860 ADAMTSL3P82987 1691 aa28.96■■■□□ 2.23
ABCD3-204ENST00000468860 BCORL1Q5H9F3 1711 aa28.95■■■□□ 2.23
ABCD3-204ENST00000468860 ABCC1P33527 1531 aa28.94■■■□□ 2.22
ABCD3-204ENST00000468860 KDM5CP41229 1560 aa28.93■■■□□ 2.22
ABCD3-204ENST00000468860 EHBP1L1Q8N3D4 1523 aa28.93■■■□□ 2.22
ABCD3-204ENST00000468860 GPATCH8Q9UKJ3 1502 aaKnown RBP28.92■■■□□ 2.22
ABCD3-204ENST00000468860 ITSN2Q9NZM3 1697 aa28.92■■■□□ 2.22
ABCD3-204ENST00000468860 ARID4BQ4LE39 1312 aaPredicted RBP28.91■■■□□ 2.22
ABCD3-204ENST00000468860 VPS8Q8N3P4 1428 aa28.9■■■□□ 2.22
ABCD3-204ENST00000468860 ARHGEF12Q9NZN5 1544 aa28.89■■■□□ 2.21
ABCD3-204ENST00000468860 SIGLEC1Q9BZZ2 1709 aa28.89■■■□□ 2.21
ABCD3-204ENST00000468860 AFAP1Q8N556 730 aa28.87■■■□□ 2.21
ABCD3-204ENST00000468860 SAMD9LQ8IVG5 1584 aa28.86■■■□□ 2.21
ABCD3-204ENST00000468860 HECW2Q9P2P5 1572 aa28.86■■■□□ 2.21
ABCD3-204ENST00000468860 CCNB3Q8WWL7 1395 aa28.86■■■□□ 2.21
ABCD3-204ENST00000468860 ATP10AO60312 1499 aa28.85■■■□□ 2.21
ABCD3-204ENST00000468860 TRAPPC8Q9Y2L5 1435 aa28.84■■■□□ 2.21
ABCD3-204ENST00000468860 TIAM1Q13009 1591 aa28.84■■■□□ 2.21
ABCD3-204ENST00000468860 MADDQ8WXG6 1647 aa28.83■■■□□ 2.21
ABCD3-204ENST00000468860 C9orf84Q5VXU9 1444 aa28.82■■■□□ 2.2
ABCD3-204ENST00000468860 MLH3Q9UHC1 1453 aa28.81■■■□□ 2.2
ABCD3-204ENST00000468860 ZNF777Q9ULD5 760 aaPredicted RBP28.8■■■□□ 2.2
ABCD3-204ENST00000468860 PTPRMP28827 1452 aa28.79■■■□□ 2.2
ABCD3-204ENST00000468860 CFDP1Q9UEE9 299 aaPredicted RBP28.79■■■□□ 2.2
ABCD3-204ENST00000468860 DIP2CQ9Y2E4 1556 aa28.79■■■□□ 2.2
ABCD3-204ENST00000468860 SYCP2Q9BX26 1530 aa28.79■■■□□ 2.2
ABCD3-204ENST00000468860 SUPT6HQ7KZ85 1726 aaKnown RBP28.78■■■□□ 2.2
ABCD3-204ENST00000468860 ABCA6Q8N139 1617 aa28.76■■■□□ 2.2
ABCD3-204ENST00000468860 PLEKHH2Q8IVE3 1493 aa28.76■■■□□ 2.19
ABCD3-204ENST00000468860 RIMS1Q86UR5 1692 aaKnown RBP28.75■■■□□ 2.19
ABCD3-204ENST00000468860 MYT1LQ9UL68 1186 aa28.75■■■□□ 2.19
ABCD3-204ENST00000468860 KIAA1107Q9UPP5 1409 aa28.75■■■□□ 2.19
ABCD3-204ENST00000468860 KIDINS220Q9ULH0 1771 aa28.74■■■□□ 2.19
ABCD3-204ENST00000468860 REREQ9P2R6 1566 aa28.74■■■□□ 2.19
ABCD3-204ENST00000468860 NCOA2Q15596 1464 aa28.72■■■□□ 2.19
ABCD3-204ENST00000468860 MAP3K1Q13233 1512 aa28.72■■■□□ 2.19
ABCD3-204ENST00000468860 HNRNPMP52272 730 aaKnown RBP eCLIP28.7■■■□□ 2.187e-7■■■■■ 29.9
ABCD3-204ENST00000468860 LRRC9Q6ZRR7 1453 aa28.7■■■□□ 2.18
ABCD3-204ENST00000468860 FER1L4A9Z1Z3 1794 aa28.7■■■□□ 2.18
ABCD3-204ENST00000468860 MLECQ14165 292 aa28.67■■■□□ 2.18
ABCD3-204ENST00000468860 INO80Q9ULG1 1556 aaPredicted RBP28.63■■■□□ 2.17
ABCD3-204ENST00000468860 SPAG9O60271 1321 aaKnown RBP28.63■■■□□ 2.17
ABCD3-204ENST00000468860 ZNF644Q9H582 1327 aaPredicted RBP28.63■■■□□ 2.17
ABCD3-204ENST00000468860 AGLP35573 1532 aa28.63■■■□□ 2.17
ABCD3-204ENST00000468860 ATP7AQ04656 1500 aa28.62■■■□□ 2.17
ABCD3-204ENST00000468860 MBD5Q9P267 1494 aa28.6■■■□□ 2.17
ABCD3-204ENST00000468860 KANK4Q5T7N3 995 aaPredicted RBP28.59■■■□□ 2.17
ABCD3-204ENST00000468860 CAMSAP2Q08AD1 1489 aa28.57■■■□□ 2.16
ABCD3-204ENST00000468860 APLP2Q06481 763 aa28.51■■■□□ 2.15
ABCD3-204ENST00000468860 ADGBQ8N7X0 1667 aa28.51■■■□□ 2.15
ABCD3-204ENST00000468860 PLXNC1O60486 1568 aa28.5■■■□□ 2.15
ABCD3-204ENST00000468860 CCDC141Q6ZP82 1450 aa28.5■■■□□ 2.15
ABCD3-204ENST00000468860 PLPPR3Q6T4P5 718 aa28.49■■■□□ 2.15
ABCD3-204ENST00000468860 RTEL1-TNFRSF6BF6WH68 1400 aa28.49■■■□□ 2.15
ABCD3-204ENST00000468860 A2MP01023 1474 aa28.48■■■□□ 2.15
ABCD3-204ENST00000468860 ARHGEF5Q12774 1597 aa28.47■■■□□ 2.15
ABCD3-204ENST00000468860 LMTK3Q96Q04 1460 aa28.46■■■□□ 2.15
ABCD3-204ENST00000468860 MYOM3Q5VTT5 1437 aa28.46■■■□□ 2.15
ABCD3-204ENST00000468860 RSPH4AQ5TD94 716 aa28.46■■■□□ 2.15
ABCD3-204ENST00000468860 MIA2Q96PC5 1412 aa28.44■■■□□ 2.14
ABCD3-204ENST00000468860 C3P01024 1663 aa28.41■■■□□ 2.14
ABCD3-204ENST00000468860 ESF1Q9H501 851 aaKnown RBP28.4■■■□□ 2.14
ABCD3-204ENST00000468860 CEBPAP49715 358 aaPredicted RBP28.39■■■□□ 2.14
ABCD3-204ENST00000468860 CNTLNQ9NXG0 1405 aa28.39■■■□□ 2.14
ABCD3-204ENST00000468860 PREX1Q8TCU6 1659 aa28.37■■■□□ 2.13
ABCD3-204ENST00000468860 MROH2AA6NES4 1674 aa28.36■■■□□ 2.13
ABCD3-204ENST00000468860 SETD1BQ9UPS6 1966 aaKnown RBP28.35■■■□□ 2.13
ABCD3-204ENST00000468860 DHX29Q7Z478 1369 aaKnown RBP28.35■■■□□ 2.13
ABCD3-204ENST00000468860 MAST1Q9Y2H9 1570 aa28.33■■■□□ 2.13
ABCD3-204ENST00000468860 TSPY4P0CV99 314 aa28.33■■■□□ 2.13
ABCD3-204ENST00000468860 TSPY10P0CW01 314 aa28.33■■■□□ 2.13
ABCD3-204ENST00000468860 PTPN23Q9H3S7 1636 aa28.31■■■□□ 2.12
ABCD3-204ENST00000468860 CLTCQ00610 1675 aaKnown RBP28.31■■■□□ 2.12
ABCD3-204ENST00000468860 GGT6Q6P531 493 aa28.28■■■□□ 2.12
ABCD3-204ENST00000468860 HSPA2P54652 639 aa28.27■■■□□ 2.12
ABCD3-204ENST00000468860 PPP6R1Q9UPN7 881 aa28.26■■■□□ 2.11
ABCD3-204ENST00000468860 FGD6Q6ZV73 1430 aa28.26■■■□□ 2.11
ABCD3-204ENST00000468860 ZMYM3Q14202 1370 aa28.24■■■□□ 2.11
ABCD3-204ENST00000468860 CROCC2H7BZ55 1655 aa28.24■■■□□ 2.11
ABCD3-204ENST00000468860 UHRF1BP1Q6BDS2 1440 aa28.24■■■□□ 2.11
ABCD3-204ENST00000468860 TCOF1Q13428 1488 aaKnown RBP28.23■■■□□ 2.11
ABCD3-204ENST00000468860 KIF3BO15066 747 aa28.21■■■□□ 2.11
ABCD3-204ENST00000468860 NPATQ14207 1427 aa28.2■■■□□ 2.11
ABCD3-204ENST00000468860 DNMT1P26358 1616 aaKnown RBP28.19■■■□□ 2.1
ABCD3-204ENST00000468860 SHANK2Q9UPX8 1470 aa28.19■■■□□ 2.1
ABCD3-204ENST00000468860 ABCC5O15440 1437 aa28.18■■■□□ 2.1
ABCD3-204ENST00000468860 FAM135AQ9P2D6 1515 aa28.18■■■□□ 2.1
ABCD3-204ENST00000468860 EIF2AK4Q9P2K8 1649 aaKnown RBP28.16■■■□□ 2.1
ABCD3-204ENST00000468860 DAPK1P53355 1430 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms