RNA–Protein interactions for RNA: ENST00000467081.1

CCNL1-209, Transcript of cyclin L1, humanhuman

TSL 3

Gene CCNL1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-209ENST00000467081 CADPS2Q86UW7 1296 aa14.89□□□□□ -0.03
CCNL1-209ENST00000467081 TMC2Q8TDI7 906 aa14.88□□□□□ -0.03
CCNL1-209ENST00000467081 C2orf72A6NCS6 295 aa14.87□□□□□ -0.03
CCNL1-209ENST00000467081 TSHZ2Q9NRE2 1034 aa14.85□□□□□ -0.03
CCNL1-209ENST00000467081 KIF3CO14782 793 aa14.83□□□□□ -0.04
CCNL1-209ENST00000467081 GPHNQ9NQX3 736 aaPredicted RBP14.82□□□□□ -0.04
CCNL1-209ENST00000467081 NCKAP5LQ9HCH0 1330 aa14.82□□□□□ -0.04
CCNL1-209ENST00000467081 PDE4AP27815 886 aa14.8□□□□□ -0.04
CCNL1-209ENST00000467081 CRISPLD2Q9H0B8 497 aa14.8□□□□□ -0.04
CCNL1-209ENST00000467081 HAP1P54257 671 aaPredicted RBP14.79□□□□□ -0.04
CCNL1-209ENST00000467081 LARP6Q9BRS8 491 aaKnown RBP14.77□□□□□ -0.05
CCNL1-209ENST00000467081 DSG2Q14126 1118 aa14.74□□□□□ -0.05
CCNL1-209ENST00000467081 SNPHO15079 494 aa14.73□□□□□ -0.05
CCNL1-209ENST00000467081 FOXK1P85037 733 aa14.73□□□□□ -0.05
CCNL1-209ENST00000467081 PLPP6Q8IY26 295 aa14.71□□□□□ -0.05
CCNL1-209ENST00000467081 DDX27Q96GQ7 796 aaKnown RBP14.71□□□□□ -0.05
CCNL1-209ENST00000467081 PPP1R15BQ5SWA1 713 aa14.7□□□□□ -0.06
CCNL1-209ENST00000467081 HOXB3P14651 431 aaPredicted RBP14.69□□□□□ -0.06
CCNL1-209ENST00000467081 MFSD10Q14728 455 aa14.68□□□□□ -0.06
CCNL1-209ENST00000467081 DOK7Q18PE1 504 aa14.67□□□□□ -0.06
CCNL1-209ENST00000467081 FAM163AQ96GL9 167 aaPredicted RBP14.67□□□□□ -0.06
CCNL1-209ENST00000467081 ZNF710Q8N1W2 664 aa14.63□□□□□ -0.07
CCNL1-209ENST00000467081 WDR70Q9NW82 654 aa14.63□□□□□ -0.07
CCNL1-209ENST00000467081 ST18O60284 1047 aa14.6□□□□□ -0.07
CCNL1-209ENST00000467081 RIMBP2O15034 1052 aa14.59□□□□□ -0.07
CCNL1-209ENST00000467081 SLC34A2O95436 690 aa14.56□□□□□ -0.08
CCNL1-209ENST00000467081 LCE2DQ5TA82 110 aaPredicted RBP14.55□□□□□ -0.08
CCNL1-209ENST00000467081 UPF1Q92900 1129 aaKnown RBP eCLIP14.54□□□□□ -0.08
CCNL1-209ENST00000467081 ZSWIM6Q9HCJ5 1215 aa14.53□□□□□ -0.08
CCNL1-209ENST00000467081 ARSIQ5FYB1 569 aa14.52□□□□□ -0.09
CCNL1-209ENST00000467081 PCDHGA4Q9Y5G9 962 aa14.52□□□□□ -0.09
CCNL1-209ENST00000467081 GPR153Q6NV75 609 aa14.51□□□□□ -0.09
CCNL1-209ENST00000467081 PTCD2Q8WV60 388 aaKnown RBP14.51□□□□□ -0.09
CCNL1-209ENST00000467081 KHSRPQ92945 711 aaKnown RBP eCLIP14.51□□□□□ -0.092e-9■■□□□ 13.4
CCNL1-209ENST00000467081 KDM2AQ9Y2K7 1162 aa14.51□□□□□ -0.09
CCNL1-209ENST00000467081 CAMK2BQ13554 666 aa14.5□□□□□ -0.09
CCNL1-209ENST00000467081 E2F4Q16254 413 aa14.5□□□□□ -0.09
CCNL1-209ENST00000467081 EMILIN3Q9NT22 766 aa14.5□□□□□ -0.09
CCNL1-209ENST00000467081 HOXB1P14653 301 aaPredicted RBP14.48□□□□□ -0.09
CCNL1-209ENST00000467081 VSIG10Q8N0Z9 540 aa14.48□□□□□ -0.09
CCNL1-209ENST00000467081 OXER1Q8TDS5 423 aa14.48□□□□□ -0.09
CCNL1-209ENST00000467081 TBC1D12O60347 775 aa14.47□□□□□ -0.09
CCNL1-209ENST00000467081 MARVELD3Q96A59 401 aa14.47□□□□□ -0.09
CCNL1-209ENST00000467081 NUDT7P0C024 238 aa14.44□□□□□ -0.1
CCNL1-209ENST00000467081 MAP3K9P80192 1104 aa14.43□□□□□ -0.1
CCNL1-209ENST00000467081 EMP3P54852 163 aa14.42□□□□□ -0.1
CCNL1-209ENST00000467081 DPYSL4O14531 572 aa14.4□□□□□ -0.1
CCNL1-209ENST00000467081 KCNV2Q8TDN2 545 aa14.38□□□□□ -0.11
CCNL1-209ENST00000467081 EVI5O60447 810 aa14.36□□□□□ -0.11
CCNL1-209ENST00000467081 POTEMA6NI47 508 aa14.35□□□□□ -0.11
CCNL1-209ENST00000467081 POTEGQ6S5H5 508 aa14.35□□□□□ -0.11
CCNL1-209ENST00000467081 ERBB3P21860 1342 aa14.35□□□□□ -0.11
CCNL1-209ENST00000467081 KDM4FA0A1W2PPD8 638 aa14.34□□□□□ -0.11
CCNL1-209ENST00000467081 FAM205CA6NFA0 338 aa14.34□□□□□ -0.11
CCNL1-209ENST00000467081 SLC24A1O60721 1099 aa14.33□□□□□ -0.12
CCNL1-209ENST00000467081 P3H3Q8IVL6 736 aa14.33□□□□□ -0.12
CCNL1-209ENST00000467081 LHX6Q9UPM6 363 aa14.33□□□□□ -0.12
CCNL1-209ENST00000467081 ZNF316A6NFI3 1004 aaPredicted RBP14.32□□□□□ -0.12
CCNL1-209ENST00000467081 ARHGEF1Q92888 912 aaKnown RBP14.3□□□□□ -0.12
CCNL1-209ENST00000467081 ARIH1Q9Y4X5 557 aaPredicted RBP14.3□□□□□ -0.12
CCNL1-209ENST00000467081 VARS2Q5ST30 1063 aaKnown RBP14.29□□□□□ -0.12
CCNL1-209ENST00000467081 HS3ST6Q96QI5 342 aa14.28□□□□□ -0.12
CCNL1-209ENST00000467081 ANO8Q9HCE9 1232 aaPredicted RBP14.27□□□□□ -0.13
CCNL1-209ENST00000467081 POTEB3A0JP26 581 aa14.26□□□□□ -0.13
CCNL1-209ENST00000467081 PDIA6Q15084 440 aa14.26□□□□□ -0.13
CCNL1-209ENST00000467081 POTEBQ6S5H4 581 aa14.26□□□□□ -0.13
CCNL1-209ENST00000467081 SPDYE16A6NNV3 312 aaPredicted RBP14.24□□□□□ -0.13
CCNL1-209ENST00000467081 ZNF454Q8N9F8 522 aa14.2□□□□□ -0.14
CCNL1-209ENST00000467081 PSDA5PKW4 1024 aaPredicted RBP14.19□□□□□ -0.14
CCNL1-209ENST00000467081 DDX12PQ92771 950 aa14.18□□□□□ -0.14
CCNL1-209ENST00000467081 PPP4R3BQ5MIZ7 849 aa14.17□□□□□ -0.14
CCNL1-209ENST00000467081 FOSBP53539 338 aa14.16□□□□□ -0.14
CCNL1-209ENST00000467081 JPH4Q96JJ6 628 aa14.16□□□□□ -0.14
CCNL1-209ENST00000467081 PTGER2P43116 358 aa14.15□□□□□ -0.14
CCNL1-209ENST00000467081 CDAN1Q8IWY9 1227 aa14.15□□□□□ -0.14
CCNL1-209ENST00000467081 ZNF687Q8N1G0 1237 aa14.14□□□□□ -0.15
CCNL1-209ENST00000467081 GRXCR2A6NFK2 248 aa14.13□□□□□ -0.15
CCNL1-209ENST00000467081 PCDHGA10Q9Y5H3 936 aa14.13□□□□□ -0.15
CCNL1-209ENST00000467081 PHF14O94880 888 aa14.12□□□□□ -0.15
CCNL1-209ENST00000467081 SEMA3EO15041 775 aa14.11□□□□□ -0.15
CCNL1-209ENST00000467081 ZDHHC16Q969W1 377 aa14.1□□□□□ -0.15
CCNL1-209ENST00000467081 MLLT3P42568 568 aaPredicted RBP14.09□□□□□ -0.15
CCNL1-209ENST00000467081 NBR1Q14596 966 aa14.09□□□□□ -0.15
CCNL1-209ENST00000467081 TYW1BQ6NUM6 668 aa14.08□□□□□ -0.16
CCNL1-209ENST00000467081 EPAS1Q99814 870 aa14.07□□□□□ -0.16
CCNL1-209ENST00000467081 ADAM33Q9BZ11 813 aa14.06□□□□□ -0.16
CCNL1-209ENST00000467081 AXIN2Q9Y2T1 843 aa14.06□□□□□ -0.16
CCNL1-209ENST00000467081 POTEEQ6S8J3 1075 aa14.05□□□□□ -0.16
CCNL1-209ENST00000467081 FBXW7Q969H0 707 aa14.05□□□□□ -0.16
CCNL1-209ENST00000467081 RBM33Q96EV2 1170 aaKnown RBP14.05□□□□□ -0.16
CCNL1-209ENST00000467081 BCL2L12Q9HB09 334 aa14.04□□□□□ -0.16
CCNL1-209ENST00000467081 KCNK17Q96T54 332 aa14.03□□□□□ -0.16
CCNL1-209ENST00000467081 PBX2P40425 430 aa14.02□□□□□ -0.17
CCNL1-209ENST00000467081 KRTAP3-3Q9BYR6 98 aa14.02□□□□□ -0.17
CCNL1-209ENST00000467081 KRTAP3-2Q9BYR7 98 aa14.02□□□□□ -0.17
CCNL1-209ENST00000467081 PCDH10Q9P2E7 1040 aa14.02□□□□□ -0.17
CCNL1-209ENST00000467081 ARHGAP33O14559 1287 aa14.01□□□□□ -0.17
CCNL1-209ENST00000467081 OSBPP22059 807 aa14.01□□□□□ -0.17
CCNL1-209ENST00000467081 PSEN2P49810 448 aa14.01□□□□□ -0.17
CCNL1-209ENST00000467081 TESPA1A2RU30 521 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms