RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 ABCA9Q8IUA7 1624 aa18.31■□□□□ 0.52
VPS16-206ENST00000466415 ZNF777Q9ULD5 760 aaPredicted RBP18.3■□□□□ 0.52
VPS16-206ENST00000466415 CDC42BPBQ9Y5S2 1711 aa18.27■□□□□ 0.52
VPS16-206ENST00000466415 PLCH2O75038 1416 aa18.27■□□□□ 0.52
VPS16-206ENST00000466415 ARAP3Q8WWN8 1544 aa18.26■□□□□ 0.51
VPS16-206ENST00000466415 DNAJC5Q9H3Z4 198 aa18.24■□□□□ 0.51
VPS16-206ENST00000466415 SAMD9LQ8IVG5 1584 aa18.24■□□□□ 0.51
VPS16-206ENST00000466415 ZNF644Q9H582 1327 aaPredicted RBP18.23■□□□□ 0.51
VPS16-206ENST00000466415 DNMT1P26358 1616 aaKnown RBP18.23■□□□□ 0.51
VPS16-206ENST00000466415 PLEKHH2Q8IVE3 1493 aa18.23■□□□□ 0.51
VPS16-206ENST00000466415 EFCAB2Q5VUJ9 269 aa18.22■□□□□ 0.51
VPS16-206ENST00000466415 DAPK1P53355 1430 aa18.22■□□□□ 0.51
VPS16-206ENST00000466415 CD109Q6YHK3 1445 aa18.21■□□□□ 0.51
VPS16-206ENST00000466415 GLI2P10070 1586 aa18.21■□□□□ 0.51
VPS16-206ENST00000466415 DIP2BQ9P265 1576 aa18.21■□□□□ 0.51
VPS16-206ENST00000466415 CFAP74Q9C0B2 1584 aa18.2■□□□□ 0.5
VPS16-206ENST00000466415 FANCAO15360 1455 aa18.19■□□□□ 0.5
VPS16-206ENST00000466415 SYCP2Q9BX26 1530 aa18.18■□□□□ 0.5
VPS16-206ENST00000466415 ARHGEF5Q12774 1597 aa18.17■□□□□ 0.5
VPS16-206ENST00000466415 ABCC5O15440 1437 aa18.17■□□□□ 0.5
VPS16-206ENST00000466415 CROCC2H7BZ55 1655 aa18.17■□□□□ 0.5
VPS16-206ENST00000466415 ABCC1P33527 1531 aa18.17■□□□□ 0.5
VPS16-206ENST00000466415 MAP3K4Q9Y6R4 1608 aa18.16■□□□□ 0.5
VPS16-206ENST00000466415 CCDC141Q6ZP82 1450 aa18.16■□□□□ 0.5
VPS16-206ENST00000466415 PTPRKQ15262 1439 aa18.15■□□□□ 0.5
VPS16-206ENST00000466415 KIAA1107Q9UPP5 1409 aa18.15■□□□□ 0.5
VPS16-206ENST00000466415 FAM69CQ0P6D2 419 aa18.15■□□□□ 0.5
VPS16-206ENST00000466415 SHANK2Q9UPX8 1470 aa18.14■□□□□ 0.5
VPS16-206ENST00000466415 HNRNPMP52272 730 aaKnown RBP eCLIP18.14■□□□□ 0.49
VPS16-206ENST00000466415 ADGBQ8N7X0 1667 aa18.13■□□□□ 0.49
VPS16-206ENST00000466415 RSPH4AQ5TD94 716 aa18.13■□□□□ 0.49
VPS16-206ENST00000466415 CHIC2Q9UKJ5 165 aa18.13■□□□□ 0.49
VPS16-206ENST00000466415 AKNAQ7Z591 1439 aa18.12■□□□□ 0.49
VPS16-206ENST00000466415 SETD5Q9C0A6 1442 aa18.12■□□□□ 0.49
VPS16-206ENST00000466415 ADGRL1O94910 1474 aa18.12■□□□□ 0.49
VPS16-206ENST00000466415 MBD5Q9P267 1494 aa18.12■□□□□ 0.49
VPS16-206ENST00000466415 TSPY4P0CV99 314 aa18.11■□□□□ 0.49
VPS16-206ENST00000466415 TSPY10P0CW01 314 aa18.11■□□□□ 0.49
VPS16-206ENST00000466415 C9orf84Q5VXU9 1444 aa18.11■□□□□ 0.49
VPS16-206ENST00000466415 HFM1A2PYH4 1435 aa18.1■□□□□ 0.49
VPS16-206ENST00000466415 ROCK1Q13464 1354 aa18.1■□□□□ 0.49
VPS16-206ENST00000466415 NEO1Q92859 1461 aa18.09■□□□□ 0.49
VPS16-206ENST00000466415 GCC2Q8IWJ2 1684 aa18.09■□□□□ 0.49
VPS16-206ENST00000466415 ARHGEF12Q9NZN5 1544 aa18.08■□□□□ 0.49
VPS16-206ENST00000466415 ADGRL2O95490 1459 aa18.08■□□□□ 0.49
VPS16-206ENST00000466415 TEX14Q8IWB6 1497 aa18.07■□□□□ 0.48
VPS16-206ENST00000466415 SCAPERQ9BY12 1400 aa18.07■□□□□ 0.48
VPS16-206ENST00000466415 ANKRD30AQ9BXX3 1397 aa18.07■□□□□ 0.48
VPS16-206ENST00000466415 RAB3GAP2Q9H2M9 1393 aa18.07■□□□□ 0.48
VPS16-206ENST00000466415 RRP7BPQ9NSQ0 103 aa18.07■□□□□ 0.48
VPS16-206ENST00000466415 MAST1Q9Y2H9 1570 aa18.07■□□□□ 0.48
VPS16-206ENST00000466415 KIF13AQ9H1H9 1805 aa18.06■□□□□ 0.48
VPS16-206ENST00000466415 NAIPQ13075 1403 aa18.06■□□□□ 0.48
VPS16-206ENST00000466415 TRAPPC8Q9Y2L5 1435 aa18.05■□□□□ 0.48
VPS16-206ENST00000466415 TSPOAP1O95153 1857 aa18.03■□□□□ 0.48
VPS16-206ENST00000466415 NCOA1Q15788 1441 aa18.02■□□□□ 0.48
VPS16-206ENST00000466415 ZNF518AQ6AHZ1 1483 aa18.01■□□□□ 0.47
VPS16-206ENST00000466415 SPAG9O60271 1321 aaKnown RBP18■□□□□ 0.47
VPS16-206ENST00000466415 PPRC1Q5VV67 1664 aaKnown RBP18■□□□□ 0.47
VPS16-206ENST00000466415 POGZQ7Z3K3 1410 aa18■□□□□ 0.47
VPS16-206ENST00000466415 CCER1Q8TC90 406 aaPredicted RBP18■□□□□ 0.47
VPS16-206ENST00000466415 DENND4BO75064 1496 aaPredicted RBP18■□□□□ 0.47
VPS16-206ENST00000466415 PLXNC1O60486 1568 aa18■□□□□ 0.47
VPS16-206ENST00000466415 MYT1LQ9UL68 1186 aa17.99■□□□□ 0.47
VPS16-206ENST00000466415 KIF15Q9NS87 1388 aa17.99■□□□□ 0.47
VPS16-206ENST00000466415 ZFYVE16Q7Z3T8 1539 aa17.98■□□□□ 0.47
VPS16-206ENST00000466415 HRCP23327 699 aa17.98■□□□□ 0.47
VPS16-206ENST00000466415 RTEL1-TNFRSF6BF6WH68 1400 aa17.98■□□□□ 0.47
VPS16-206ENST00000466415 AFAP1Q8N556 730 aa17.97■□□□□ 0.47
VPS16-206ENST00000466415 ATP7AQ04656 1500 aa17.97■□□□□ 0.47
VPS16-206ENST00000466415 INO80Q9ULG1 1556 aaPredicted RBP17.96■□□□□ 0.47
VPS16-206ENST00000466415 TRHP20396 242 aaPredicted RBP17.96■□□□□ 0.47
VPS16-206ENST00000466415 ACIN1Q9UKV3 1341 aaKnown RBP17.96■□□□□ 0.46
VPS16-206ENST00000466415 ANKRD50Q9ULJ7 1429 aa17.95■□□□□ 0.46
VPS16-206ENST00000466415 KDM5CP41229 1560 aa17.95■□□□□ 0.46
VPS16-206ENST00000466415 HECW2Q9P2P5 1572 aa17.94■□□□□ 0.46
VPS16-206ENST00000466415 KDM6BO15054 1643 aa17.94■□□□□ 0.46
VPS16-206ENST00000466415 DUOX2Q9NRD8 1548 aa17.93■□□□□ 0.46
VPS16-206ENST00000466415 TRIM52Q96A61 297 aa17.91■□□□□ 0.46
VPS16-206ENST00000466415 RICTORQ6R327 1708 aa17.91■□□□□ 0.46
VPS16-206ENST00000466415 DHX57Q6P158 1386 aaKnown RBP17.91■□□□□ 0.46
VPS16-206ENST00000466415 ERBINQ96RT1 1412 aa17.89■□□□□ 0.46
VPS16-206ENST00000466415 MLH3Q9UHC1 1453 aa17.89■□□□□ 0.45
VPS16-206ENST00000466415 RAPGEF3O95398 923 aa17.89■□□□□ 0.45
VPS16-206ENST00000466415 FRMPD1Q5SYB0 1578 aa17.88■□□□□ 0.45
VPS16-206ENST00000466415 KIDINS220Q9ULH0 1771 aa17.88■□□□□ 0.45
VPS16-206ENST00000466415 ZMYM4Q5VZL5 1548 aa17.87■□□□□ 0.45
VPS16-206ENST00000466415 ABCA6Q8N139 1617 aa17.83■□□□□ 0.45
VPS16-206ENST00000466415 ZEB1P37275 1124 aaPredicted RBP17.83■□□□□ 0.44
VPS16-206ENST00000466415 A2MP01023 1474 aa17.82■□□□□ 0.44
VPS16-206ENST00000466415 CLSPNQ9HAW4 1339 aa17.82■□□□□ 0.44
VPS16-206ENST00000466415 EIF2AK4Q9P2K8 1649 aaKnown RBP17.82■□□□□ 0.44
VPS16-206ENST00000466415 MAGI2Q86UL8 1455 aa17.82■□□□□ 0.44
VPS16-206ENST00000466415 DHX29Q7Z478 1369 aaKnown RBP17.81■□□□□ 0.44
VPS16-206ENST00000466415 UNC13BO14795 1591 aa17.81■□□□□ 0.44
VPS16-206ENST00000466415 DIP2CQ9Y2E4 1556 aa17.81■□□□□ 0.44
VPS16-206ENST00000466415 KDM5DQ9BY66 1539 aa17.79■□□□□ 0.44
VPS16-206ENST00000466415 NUP155O75694 1391 aa17.79■□□□□ 0.44
VPS16-206ENST00000466415 SLC4A1APQ9BWU0 796 aaKnown RBP17.77■□□□□ 0.44
VPS16-206ENST00000466415 YEATS2Q9ULM3 1422 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms