RNA–Protein interactions for RNA: ENST00000466124.1

PRKCB-204, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-204ENST00000466124 RICTORQ6R327 1708 aa9.54□□□□□ -0.88
PRKCB-204ENST00000466124 DISP3Q9P2K9 1392 aa9.54□□□□□ -0.88
PRKCB-204ENST00000466124 ARID3CA6NKF2 412 aa9.54□□□□□ -0.88
PRKCB-204ENST00000466124 FANCAO15360 1455 aa9.53□□□□□ -0.88
PRKCB-204ENST00000466124 DENND4BO75064 1496 aaPredicted RBP9.53□□□□□ -0.88
PRKCB-204ENST00000466124 ZMYM4Q5VZL5 1548 aa9.53□□□□□ -0.88
PRKCB-204ENST00000466124 POGZQ7Z3K3 1410 aa9.53□□□□□ -0.88
PRKCB-204ENST00000466124 MYCNP04198 464 aaPredicted RBP9.52□□□□□ -0.89
PRKCB-204ENST00000466124 TTC37Q6PGP7 1564 aa9.52□□□□□ -0.89
PRKCB-204ENST00000466124 AKNAQ7Z591 1439 aa9.52□□□□□ -0.89
PRKCB-204ENST00000466124 FAM9AQ8IZU1 332 aaPredicted RBP9.52□□□□□ -0.89
PRKCB-204ENST00000466124 RAPGEF6Q8TEU7 1601 aa9.52□□□□□ -0.89
PRKCB-204ENST00000466124 SIGLEC1Q9BZZ2 1709 aa9.51□□□□□ -0.89
PRKCB-204ENST00000466124 SAMD9Q5K651 1589 aa9.51□□□□□ -0.89
PRKCB-204ENST00000466124 EFCAB5A4FU69 1503 aa9.51□□□□□ -0.89
PRKCB-204ENST00000466124 NUP153P49790 1475 aaKnown RBP9.5□□□□□ -0.89
PRKCB-204ENST00000466124 MAGI2Q86UL8 1455 aa9.5□□□□□ -0.89
PRKCB-204ENST00000466124 ZFYVE16Q7Z3T8 1539 aa9.5□□□□□ -0.89
PRKCB-204ENST00000466124 FER1L4A9Z1Z3 1794 aa9.5□□□□□ -0.89
PRKCB-204ENST00000466124 SPATA31D1Q6ZQQ2 1576 aa9.5□□□□□ -0.89
PRKCB-204ENST00000466124 CFAP74Q9C0B2 1584 aa9.5□□□□□ -0.89
PRKCB-204ENST00000466124 YEATS2Q9ULM3 1422 aa9.49□□□□□ -0.89
PRKCB-204ENST00000466124 PREX1Q8TCU6 1659 aa9.48□□□□□ -0.89
PRKCB-204ENST00000466124 ARHGEF12Q9NZN5 1544 aa9.48□□□□□ -0.89
PRKCB-204ENST00000466124 P3H3Q8IVL6 736 aa9.48□□□□□ -0.89
PRKCB-204ENST00000466124 U3KPZ7 1027 aaPredicted RBP9.47□□□□□ -0.89
PRKCB-204ENST00000466124 HECW1Q76N89 1606 aa9.46□□□□□ -0.89
PRKCB-204ENST00000466124 STRCQ7RTU9 1775 aa9.46□□□□□ -0.9
PRKCB-204ENST00000466124 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.46□□□□□ -0.9
PRKCB-204ENST00000466124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.45□□□□□ -0.9
PRKCB-204ENST00000466124 HNRNPUL2Q1KMD3 747 aaKnown RBP9.45□□□□□ -0.9
PRKCB-204ENST00000466124 MLECQ14165 292 aa9.44□□□□□ -0.9
PRKCB-204ENST00000466124 ATP10AO60312 1499 aa9.43□□□□□ -0.9
PRKCB-204ENST00000466124 PTPRTO14522 1441 aa9.43□□□□□ -0.9
PRKCB-204ENST00000466124 C9orf84Q5VXU9 1444 aa9.43□□□□□ -0.9
PRKCB-204ENST00000466124 PLEKHD1A6NEE1 506 aa9.43□□□□□ -0.9
PRKCB-204ENST00000466124 IQSEC2Q5JU85 1478 aa9.42□□□□□ -0.9
PRKCB-204ENST00000466124 UHRF1BP1Q6BDS2 1440 aa9.42□□□□□ -0.9
PRKCB-204ENST00000466124 LTBP4Q8N2S1 1624 aa9.42□□□□□ -0.9
PRKCB-204ENST00000466124 SCAPERQ9BY12 1400 aa9.41□□□□□ -0.9
PRKCB-204ENST00000466124 SETD1BQ9UPS6 1966 aaKnown RBP9.41□□□□□ -0.9
PRKCB-204ENST00000466124 PLCH2O75038 1416 aa9.4□□□□□ -0.9
PRKCB-204ENST00000466124 CEBPAP49715 358 aaPredicted RBP9.39□□□□□ -0.91
PRKCB-204ENST00000466124 KDM5CP41229 1560 aa9.37□□□□□ -0.91
PRKCB-204ENST00000466124 REREQ9P2R6 1566 aa9.37□□□□□ -0.91
PRKCB-204ENST00000466124 CDK13Q14004 1512 aaKnown RBP9.36□□□□□ -0.91
PRKCB-204ENST00000466124 C3P01024 1663 aa9.36□□□□□ -0.91
PRKCB-204ENST00000466124 ZNF518AQ6AHZ1 1483 aa9.35□□□□□ -0.91
PRKCB-204ENST00000466124 NCOA1Q15788 1441 aa9.35□□□□□ -0.91
PRKCB-204ENST00000466124 DIP2CQ9Y2E4 1556 aa9.34□□□□□ -0.91
PRKCB-204ENST00000466124 ATXN8OSP0DMR3 200 aa9.34□□□□□ -0.91
PRKCB-204ENST00000466124 EFCAB2Q5VUJ9 269 aa9.34□□□□□ -0.91
PRKCB-204ENST00000466124 ATF5Q9Y2D1 282 aaPredicted RBP9.34□□□□□ -0.91
PRKCB-204ENST00000466124 MYO5CQ9NQX4 1742 aa9.34□□□□□ -0.92
PRKCB-204ENST00000466124 TRAPPC8Q9Y2L5 1435 aa9.33□□□□□ -0.92
PRKCB-204ENST00000466124 AGLP35573 1532 aa9.33□□□□□ -0.92
PRKCB-204ENST00000466124 ABCA6Q8N139 1617 aa9.31□□□□□ -0.92
PRKCB-204ENST00000466124 MLH3Q9UHC1 1453 aa9.31□□□□□ -0.92
PRKCB-204ENST00000466124 SAMD1Q6SPF0 538 aaPredicted RBP9.3□□□□□ -0.92
PRKCB-204ENST00000466124 AFAP1Q8N556 730 aa9.3□□□□□ -0.92
PRKCB-204ENST00000466124 RNF39Q9H2S5 420 aa9.3□□□□□ -0.92
PRKCB-204ENST00000466124 NPATQ14207 1427 aa9.3□□□□□ -0.92
PRKCB-204ENST00000466124 CNTLNQ9NXG0 1405 aa9.3□□□□□ -0.92
PRKCB-204ENST00000466124 RANGAP1P46060 587 aaPredicted RBP9.29□□□□□ -0.92
PRKCB-204ENST00000466124 KIF14Q15058 1648 aa9.29□□□□□ -0.92
PRKCB-204ENST00000466124 CAMSAP1Q5T5Y3 1602 aa9.29□□□□□ -0.92
PRKCB-204ENST00000466124 ARHGAP5Q13017 1502 aa9.29□□□□□ -0.92
PRKCB-204ENST00000466124 EEA1Q15075 1411 aa9.28□□□□□ -0.92
PRKCB-204ENST00000466124 MROH2AA6NES4 1674 aa9.27□□□□□ -0.93
PRKCB-204ENST00000466124 TROQ12816 1431 aaPredicted RBP9.27□□□□□ -0.93
PRKCB-204ENST00000466124 ZNF335Q9H4Z2 1342 aaPredicted RBP9.27□□□□□ -0.93
PRKCB-204ENST00000466124 PLA2R1Q13018 1463 aa9.27□□□□□ -0.93
PRKCB-204ENST00000466124 ABCC1P33527 1531 aa9.26□□□□□ -0.93
PRKCB-204ENST00000466124 FMN1Q68DA7 1419 aa9.26□□□□□ -0.93
PRKCB-204ENST00000466124 UBAP1LF5GYI3 381 aa9.26□□□□□ -0.93
PRKCB-204ENST00000466124 ESF1Q9H501 851 aaKnown RBP9.26□□□□□ -0.93
PRKCB-204ENST00000466124 CDK11AQ9UQ88 783 aaPredicted RBP9.26□□□□□ -0.93
PRKCB-204ENST00000466124 MED1Q15648 1581 aaPredicted RBP9.25□□□□□ -0.93
PRKCB-204ENST00000466124 TCOF1Q13428 1488 aaKnown RBP9.25□□□□□ -0.93
PRKCB-204ENST00000466124 ZNF142P52746 1687 aaPredicted RBP9.25□□□□□ -0.93
PRKCB-204ENST00000466124 CDC42BPBQ9Y5S2 1711 aa9.25□□□□□ -0.93
PRKCB-204ENST00000466124 KIDINS220Q9ULH0 1771 aa9.24□□□□□ -0.93
PRKCB-204ENST00000466124 CLIP1P30622 1438 aa9.24□□□□□ -0.93
PRKCB-204ENST00000466124 ITSN2Q9NZM3 1697 aa9.24□□□□□ -0.93
PRKCB-204ENST00000466124 MYT1LQ9UL68 1186 aa9.24□□□□□ -0.93
PRKCB-204ENST00000466124 NCKAP5LQ9HCH0 1330 aa9.24□□□□□ -0.93
PRKCB-204ENST00000466124 PREX2Q70Z35 1606 aa9.23□□□□□ -0.93
PRKCB-204ENST00000466124 PKD2Q13563 968 aa9.23□□□□□ -0.93
PRKCB-204ENST00000466124 MYO3AQ8NEV4 1616 aa9.23□□□□□ -0.93
PRKCB-204ENST00000466124 ZMYM3Q14202 1370 aa9.23□□□□□ -0.93
PRKCB-204ENST00000466124 CEP170BQ9Y4F5 1589 aaPredicted RBP9.22□□□□□ -0.93
PRKCB-204ENST00000466124 HSPA1LP34931 641 aa9.21□□□□□ -0.94
PRKCB-204ENST00000466124 ARHGAP35Q9NRY4 1499 aa9.21□□□□□ -0.94
PRKCB-204ENST00000466124 PTPRKQ15262 1439 aa9.2□□□□□ -0.94
PRKCB-204ENST00000466124 SAMD9LQ8IVG5 1584 aa9.2□□□□□ -0.94
PRKCB-204ENST00000466124 LRRIQ1Q96JM4 1722 aa9.19□□□□□ -0.94
PRKCB-204ENST00000466124 SPINK5Q9NQ38 1064 aaPredicted RBP9.19□□□□□ -0.94
PRKCB-204ENST00000466124 ATP1B4Q9UN42 357 aaPredicted RBP9.19□□□□□ -0.94
PRKCB-204ENST00000466124 CPS1P31327 1500 aa9.19□□□□□ -0.94
PRKCB-204ENST00000466124 PLXNC1O60486 1568 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms