RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 ADAMTSL3P82987 1691 aa24.18■■□□□ 1.46
MRPL55-225ENST00000465268 HECW2Q9P2P5 1572 aa24.16■■□□□ 1.46
MRPL55-225ENST00000465268 PTPRMP28827 1452 aa24.16■■□□□ 1.46
MRPL55-225ENST00000465268 FYCO1Q9BQS8 1478 aa24.16■■□□□ 1.46
MRPL55-225ENST00000465268 AFAP1Q8N556 730 aa24.15■■□□□ 1.46
MRPL55-225ENST00000465268 ARHGAP5Q13017 1502 aa24.15■■□□□ 1.46
MRPL55-225ENST00000465268 ZFYVE16Q7Z3T8 1539 aa24.15■■□□□ 1.46
MRPL55-225ENST00000465268 MAGI2Q86UL8 1455 aa24.13■■□□□ 1.45
MRPL55-225ENST00000465268 BCORL1Q5H9F3 1711 aa24.13■■□□□ 1.45
MRPL55-225ENST00000465268 SIGLEC1Q9BZZ2 1709 aa24.13■■□□□ 1.45
MRPL55-225ENST00000465268 MYO5CQ9NQX4 1742 aa24.13■■□□□ 1.45
MRPL55-225ENST00000465268 MADDQ8WXG6 1647 aa24.1■■□□□ 1.45
MRPL55-225ENST00000465268 MLECQ14165 292 aa24.09■■□□□ 1.45
MRPL55-225ENST00000465268 ARHGEF12Q9NZN5 1544 aa24.09■■□□□ 1.45
MRPL55-225ENST00000465268 LOC105371045A0A1W2PR82 267 aa24.07■■□□□ 1.44
MRPL55-225ENST00000465268 CEP162Q5TB80 1403 aa24.06■■□□□ 1.44
MRPL55-225ENST00000465268 TRAPPC8Q9Y2L5 1435 aa24.06■■□□□ 1.44
MRPL55-225ENST00000465268 ATP10AO60312 1499 aa24.05■■□□□ 1.44
MRPL55-225ENST00000465268 ZNF518AQ6AHZ1 1483 aa24.05■■□□□ 1.44
MRPL55-225ENST00000465268 CDC42BPBQ9Y5S2 1711 aa24.04■■□□□ 1.44
MRPL55-225ENST00000465268 PLPPR3Q6T4P5 718 aa24.02■■□□□ 1.44
MRPL55-225ENST00000465268 KDM5CP41229 1560 aa24.02■■□□□ 1.44
MRPL55-225ENST00000465268 PREX2Q70Z35 1606 aa24.02■■□□□ 1.44
MRPL55-225ENST00000465268 GPATCH8Q9UKJ3 1502 aaKnown RBP24.01■■□□□ 1.43
MRPL55-225ENST00000465268 C9orf84Q5VXU9 1444 aa24.01■■□□□ 1.43
MRPL55-225ENST00000465268 ZNF777Q9ULD5 760 aaPredicted RBP24■■□□□ 1.43
MRPL55-225ENST00000465268 ABCC1P33527 1531 aa24■■□□□ 1.43
MRPL55-225ENST00000465268 MYT1LQ9UL68 1186 aa23.98■■□□□ 1.43
MRPL55-225ENST00000465268 RIMS1Q86UR5 1692 aaKnown RBP23.97■■□□□ 1.43
MRPL55-225ENST00000465268 MLH3Q9UHC1 1453 aa23.95■■□□□ 1.42
MRPL55-225ENST00000465268 MTUS2Q5JR59 1369 aa23.95■■□□□ 1.42
MRPL55-225ENST00000465268 CDC42BPAQ5VT25 1732 aa23.95■■□□□ 1.42
MRPL55-225ENST00000465268 HNRNPMP52272 730 aaKnown RBP eCLIP23.94■■□□□ 1.42
MRPL55-225ENST00000465268 DIP2CQ9Y2E4 1556 aa23.93■■□□□ 1.42
MRPL55-225ENST00000465268 SAMD9LQ8IVG5 1584 aa23.91■■□□□ 1.42
MRPL55-225ENST00000465268 CFDP1Q9UEE9 299 aaPredicted RBP23.91■■□□□ 1.42
MRPL55-225ENST00000465268 LMTK3Q96Q04 1460 aa23.91■■□□□ 1.42
MRPL55-225ENST00000465268 CCNB3Q8WWL7 1395 aa23.91■■□□□ 1.42
MRPL55-225ENST00000465268 CEBPAP49715 358 aaPredicted RBP23.9■■□□□ 1.42
MRPL55-225ENST00000465268 ABCA6Q8N139 1617 aa23.9■■□□□ 1.42
MRPL55-225ENST00000465268 ITSN2Q9NZM3 1697 aa23.89■■□□□ 1.42
MRPL55-225ENST00000465268 ZNF644Q9H582 1327 aaPredicted RBP23.89■■□□□ 1.42
MRPL55-225ENST00000465268 SYCP2Q9BX26 1530 aa23.88■■□□□ 1.41
MRPL55-225ENST00000465268 HSPA2P54652 639 aa23.87■■□□□ 1.41
MRPL55-225ENST00000465268 ILDR1Q86SU0 546 aaPredicted RBP23.86■■□□□ 1.41
MRPL55-225ENST00000465268 KIAA1107Q9UPP5 1409 aa23.84■■□□□ 1.41
MRPL55-225ENST00000465268 REREQ9P2R6 1566 aa23.83■■□□□ 1.41
MRPL55-225ENST00000465268 EHBP1L1Q8N3D4 1523 aa23.83■■□□□ 1.41
MRPL55-225ENST00000465268 KIDINS220Q9ULH0 1771 aa23.83■■□□□ 1.4
MRPL55-225ENST00000465268 SPAG9O60271 1321 aaKnown RBP23.83■■□□□ 1.4
MRPL55-225ENST00000465268 TIAM1Q13009 1591 aa23.82■■□□□ 1.4
MRPL55-225ENST00000465268 FER1L4A9Z1Z3 1794 aa23.81■■□□□ 1.4
MRPL55-225ENST00000465268 AGLP35573 1532 aa23.79■■□□□ 1.4
MRPL55-225ENST00000465268 VPS8Q8N3P4 1428 aa23.78■■□□□ 1.4
MRPL55-225ENST00000465268 PLEKHH2Q8IVE3 1493 aa23.77■■□□□ 1.4
MRPL55-225ENST00000465268 MBD5Q9P267 1494 aa23.76■■□□□ 1.39
MRPL55-225ENST00000465268 NCOA2Q15596 1464 aa23.75■■□□□ 1.39
MRPL55-225ENST00000465268 KANK4Q5T7N3 995 aaPredicted RBP23.73■■□□□ 1.39
MRPL55-225ENST00000465268 ATP7AQ04656 1500 aa23.73■■□□□ 1.39
MRPL55-225ENST00000465268 INO80Q9ULG1 1556 aaPredicted RBP23.69■■□□□ 1.38
MRPL55-225ENST00000465268 A2MP01023 1474 aa23.68■■□□□ 1.38
MRPL55-225ENST00000465268 LRRC9Q6ZRR7 1453 aa23.68■■□□□ 1.38
MRPL55-225ENST00000465268 ESF1Q9H501 851 aaKnown RBP23.66■■□□□ 1.38
MRPL55-225ENST00000465268 PLXNC1O60486 1568 aa23.65■■□□□ 1.38
MRPL55-225ENST00000465268 CAMSAP2Q08AD1 1489 aa23.64■■□□□ 1.38
MRPL55-225ENST00000465268 SUPT6HQ7KZ85 1726 aaKnown RBP23.64■■□□□ 1.37
MRPL55-225ENST00000465268 GGT6Q6P531 493 aa23.63■■□□□ 1.37
MRPL55-225ENST00000465268 C3P01024 1663 aa23.61■■□□□ 1.37
MRPL55-225ENST00000465268 RTEL1-TNFRSF6BF6WH68 1400 aa23.61■■□□□ 1.37
MRPL55-225ENST00000465268 UHRF1BP1Q6BDS2 1440 aa23.61■■□□□ 1.37
MRPL55-225ENST00000465268 CNTLNQ9NXG0 1405 aa23.61■■□□□ 1.37
MRPL55-225ENST00000465268 ZMYM3Q14202 1370 aa23.61■■□□□ 1.37
MRPL55-225ENST00000465268 CCDC141Q6ZP82 1450 aa23.59■■□□□ 1.37
MRPL55-225ENST00000465268 PREX1Q8TCU6 1659 aa23.58■■□□□ 1.37
MRPL55-225ENST00000465268 DHX29Q7Z478 1369 aaKnown RBP23.58■■□□□ 1.37
MRPL55-225ENST00000465268 MAP3K1Q13233 1512 aa23.58■■□□□ 1.36
MRPL55-225ENST00000465268 RSPH4AQ5TD94 716 aa23.54■■□□□ 1.36
MRPL55-225ENST00000465268 FBXO41Q8TF61 875 aa23.53■■□□□ 1.36
MRPL55-225ENST00000465268 KIF3BO15066 747 aa23.51■■□□□ 1.35
MRPL55-225ENST00000465268 ADGBQ8N7X0 1667 aa23.5■■□□□ 1.35
MRPL55-225ENST00000465268 NPATQ14207 1427 aa23.5■■□□□ 1.35
MRPL55-225ENST00000465268 PTPRKQ15262 1439 aa23.5■■□□□ 1.35
MRPL55-225ENST00000465268 MYOM3Q5VTT5 1437 aa23.5■■□□□ 1.35
MRPL55-225ENST00000465268 ARHGEF5Q12774 1597 aa23.49■■□□□ 1.35
MRPL55-225ENST00000465268 TSPY4P0CV99 314 aa23.49■■□□□ 1.35
MRPL55-225ENST00000465268 TSPY10P0CW01 314 aa23.49■■□□□ 1.35
MRPL55-225ENST00000465268 CLTCQ00610 1675 aaKnown RBP23.48■■□□□ 1.35
MRPL55-225ENST00000465268 PPP6R1Q9UPN7 881 aa23.48■■□□□ 1.35
MRPL55-225ENST00000465268 MROH2AA6NES4 1674 aa23.47■■□□□ 1.35
MRPL55-225ENST00000465268 STRCQ7RTU9 1775 aa23.47■■□□□ 1.35
MRPL55-225ENST00000465268 MIA2Q96PC5 1412 aa23.46■■□□□ 1.35
MRPL55-225ENST00000465268 SETD1BQ9UPS6 1966 aaKnown RBP23.46■■□□□ 1.35
MRPL55-225ENST00000465268 FBXO31Q5XUX0 539 aaPredicted RBP23.43■■□□□ 1.34
MRPL55-225ENST00000465268 CERKQ8TCT0 537 aa23.43■■□□□ 1.34
MRPL55-225ENST00000465268 APLP2Q06481 763 aa23.42■■□□□ 1.34
MRPL55-225ENST00000465268 NCOA1Q15788 1441 aa23.42■■□□□ 1.34
MRPL55-225ENST00000465268 DMRT2Q9Y5R5 561 aa23.41■■□□□ 1.34
MRPL55-225ENST00000465268 NCKAP5LQ9HCH0 1330 aa23.39■■□□□ 1.34
MRPL55-225ENST00000465268 WASHC2CQ9Y4E1 1318 aa23.38■■□□□ 1.33
MRPL55-225ENST00000465268 PTPRTO14522 1441 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms