RNA–Protein interactions for RNA: ENST00000465224.5

CNNM3-203, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 1 (best)

Gene CNNM3, Length 2,607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-203ENST00000465224 TRIM52Q96A61 297 aa13.9□□□□□ -0.18
CNNM3-203ENST00000465224 DEKP35659 375 aaKnown RBP13.89□□□□□ -0.19
CNNM3-203ENST00000465224 HECW1Q76N89 1606 aa13.89□□□□□ -0.19
CNNM3-203ENST00000465224 FKBP8Q14318 412 aa13.87□□□□□ -0.19
CNNM3-203ENST00000465224 FOXD1Q16676 465 aa13.87□□□□□ -0.19
CNNM3-203ENST00000465224 ERICH6BQ5W0A0 696 aa13.86□□□□□ -0.19
CNNM3-203ENST00000465224 PODXL2Q9NZ53 605 aa13.86□□□□□ -0.19
CNNM3-203ENST00000465224 MPHOSPH9Q99550 1183 aa13.85□□□□□ -0.19
CNNM3-203ENST00000465224 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.85□□□□□ -0.19
CNNM3-203ENST00000465224 FBLN2P98095 1184 aa13.84□□□□□ -0.19
CNNM3-203ENST00000465224 MAGI1Q96QZ7 1491 aaPredicted RBP13.84□□□□□ -0.19
CNNM3-203ENST00000465224 GCC2Q8IWJ2 1684 aa13.84□□□□□ -0.19
CNNM3-203ENST00000465224 HSPA5P11021 654 aaKnown RBP13.84□□□□□ -0.19
CNNM3-203ENST00000465224 ZNF644Q9H582 1327 aaPredicted RBP13.83□□□□□ -0.2
CNNM3-203ENST00000465224 MIA2Q96PC5 1412 aa13.82□□□□□ -0.2
CNNM3-203ENST00000465224 CHMP7Q8WUX9 453 aaPredicted RBP13.82□□□□□ -0.2
CNNM3-203ENST00000465224 WASHC2AQ641Q2 1341 aa13.82□□□□□ -0.2
CNNM3-203ENST00000465224 MYT1LQ9UL68 1186 aa13.82□□□□□ -0.2
CNNM3-203ENST00000465224 GRIN2AQ12879 1464 aa13.82□□□□□ -0.2
CNNM3-203ENST00000465224 SYNJ2O15056 1496 aa13.81□□□□□ -0.2
CNNM3-203ENST00000465224 L3MBTL2Q969R5 705 aa13.81□□□□□ -0.2
CNNM3-203ENST00000465224 AKNAQ7Z591 1439 aa13.81□□□□□ -0.2
CNNM3-203ENST00000465224 DISP1Q96F81 1524 aa13.8□□□□□ -0.2
CNNM3-203ENST00000465224 C11orf95C9JLR9 678 aaPredicted RBP13.77□□□□□ -0.2
CNNM3-203ENST00000465224 ABCC5O15440 1437 aa13.77□□□□□ -0.2
CNNM3-203ENST00000465224 DAPK1P53355 1430 aa13.77□□□□□ -0.2
CNNM3-203ENST00000465224 NUP153P49790 1475 aaKnown RBP13.77□□□□□ -0.2
CNNM3-203ENST00000465224 FANCIQ9NVI1 1328 aa13.77□□□□□ -0.21
CNNM3-203ENST00000465224 KIAA0586Q9BVV6 1533 aa13.77□□□□□ -0.21
CNNM3-203ENST00000465224 KIAA0556O60303 1618 aa13.76□□□□□ -0.21
CNNM3-203ENST00000465224 EIF4G2P78344 907 aaKnown RBP eCLIP13.76□□□□□ -0.21
CNNM3-203ENST00000465224 NBPF8Q3BBV2 869 aa13.75□□□□□ -0.21
CNNM3-203ENST00000465224 CEP170Q5SW79 1584 aa13.75□□□□□ -0.21
CNNM3-203ENST00000465224 ANKRD30BQ9BXX2 1392 aa13.75□□□□□ -0.21
CNNM3-203ENST00000465224 ROCK1Q13464 1354 aa13.73□□□□□ -0.21
CNNM3-203ENST00000465224 CCDC184Q52MB2 194 aa13.73□□□□□ -0.21
CNNM3-203ENST00000465224 NEFLP07196 543 aa13.72□□□□□ -0.21
CNNM3-203ENST00000465224 HNRNPUQ00839 825 aaKnown RBP eCLIP13.72□□□□□ -0.21
CNNM3-203ENST00000465224 PRG4Q92954 1404 aaPredicted RBP13.72□□□□□ -0.21
CNNM3-203ENST00000465224 DNMT1P26358 1616 aaKnown RBP13.72□□□□□ -0.21
CNNM3-203ENST00000465224 RAPGEF6Q8TEU7 1601 aa13.71□□□□□ -0.21
CNNM3-203ENST00000465224 SLC4A1APQ9BWU0 796 aaKnown RBP13.71□□□□□ -0.21
CNNM3-203ENST00000465224 CHD1O14646 1710 aa13.71□□□□□ -0.22
CNNM3-203ENST00000465224 RPRD2Q5VT52 1461 aaKnown RBP13.7□□□□□ -0.22
CNNM3-203ENST00000465224 NUP160Q12769 1436 aa13.69□□□□□ -0.22
CNNM3-203ENST00000465224 CDK11AQ9UQ88 783 aaPredicted RBP13.69□□□□□ -0.22
CNNM3-203ENST00000465224 CCDC7Q96M83 1385 aa13.68□□□□□ -0.22
CNNM3-203ENST00000465224 PLB1Q6P1J6 1458 aa13.68□□□□□ -0.22
CNNM3-203ENST00000465224 TEX14Q8IWB6 1497 aa13.68□□□□□ -0.22
CNNM3-203ENST00000465224 NCOA1Q15788 1441 aa13.68□□□□□ -0.22
CNNM3-203ENST00000465224 CNTLNQ9NXG0 1405 aa13.68□□□□□ -0.22
CNNM3-203ENST00000465224 CFDP1Q9UEE9 299 aaPredicted RBP13.67□□□□□ -0.22
CNNM3-203ENST00000465224 ZNF777Q9ULD5 760 aaPredicted RBP13.67□□□□□ -0.22
CNNM3-203ENST00000465224 RTN4Q9NQC3 1192 aaKnown RBP13.66□□□□□ -0.22
CNNM3-203ENST00000465224 TROQ12816 1431 aaPredicted RBP13.65□□□□□ -0.22
CNNM3-203ENST00000465224 PZPP20742 1482 aa13.65□□□□□ -0.22
CNNM3-203ENST00000465224 IL27Q8NEV9 243 aa13.65□□□□□ -0.22
CNNM3-203ENST00000465224 CAMSAP2Q08AD1 1489 aa13.65□□□□□ -0.22
CNNM3-203ENST00000465224 GPATCH8Q9UKJ3 1502 aaKnown RBP13.65□□□□□ -0.22
CNNM3-203ENST00000465224 IRX6P78412 446 aaPredicted RBP13.65□□□□□ -0.22
CNNM3-203ENST00000465224 PRKRIP1Q9H875 184 aaPredicted RBP13.65□□□□□ -0.22
CNNM3-203ENST00000465224 SPATA31E1Q6ZUB1 1445 aa13.64□□□□□ -0.23
CNNM3-203ENST00000465224 JPH4Q96JJ6 628 aa13.64□□□□□ -0.23
CNNM3-203ENST00000465224 KIF14Q15058 1648 aa13.64□□□□□ -0.23
CNNM3-203ENST00000465224 KIF7Q2M1P5 1343 aa13.63□□□□□ -0.23
CNNM3-203ENST00000465224 FAM9BQ8IZU0 186 aa13.61□□□□□ -0.23
CNNM3-203ENST00000465224 PKD2Q13563 968 aa13.6□□□□□ -0.23
CNNM3-203ENST00000465224 MRS2Q9HD23 443 aa13.59□□□□□ -0.23
CNNM3-203ENST00000465224 CARMIL2Q6F5E8 1435 aa13.58□□□□□ -0.24
CNNM3-203ENST00000465224 ZNF326Q5BKZ1 582 aaKnown RBP13.58□□□□□ -0.24
CNNM3-203ENST00000465224 KIAA1107Q9UPP5 1409 aa13.57□□□□□ -0.24
CNNM3-203ENST00000465224 NBR1Q14596 966 aa13.57□□□□□ -0.24
CNNM3-203ENST00000465224 ITSN2Q9NZM3 1697 aa13.56□□□□□ -0.24
CNNM3-203ENST00000465224 ADGRL2O95490 1459 aa13.56□□□□□ -0.24
CNNM3-203ENST00000465224 CNGB1Q14028 1251 aaPredicted RBP13.56□□□□□ -0.24
CNNM3-203ENST00000465224 ADGBQ8N7X0 1667 aa13.56□□□□□ -0.24
CNNM3-203ENST00000465224 MBD5Q9P267 1494 aa13.56□□□□□ -0.24
CNNM3-203ENST00000465224 ADCY10Q96PN6 1610 aa13.56□□□□□ -0.24
CNNM3-203ENST00000465224 ANKRD30AQ9BXX3 1397 aa13.55□□□□□ -0.24
CNNM3-203ENST00000465224 CROCC2H7BZ55 1655 aa13.54□□□□□ -0.24
CNNM3-203ENST00000465224 PLEKHD1A6NEE1 506 aa13.54□□□□□ -0.24
CNNM3-203ENST00000465224 ANKRD50Q9ULJ7 1429 aa13.54□□□□□ -0.24
CNNM3-203ENST00000465224 POLR3GLQ9BT43 218 aa13.54□□□□□ -0.24
CNNM3-203ENST00000465224 ATP10BO94823 1461 aa13.53□□□□□ -0.24
CNNM3-203ENST00000465224 BCORL1Q5H9F3 1711 aa13.53□□□□□ -0.24
CNNM3-203ENST00000465224 USP47Q96K76 1375 aa13.53□□□□□ -0.24
CNNM3-203ENST00000465224 DHX29Q7Z478 1369 aaKnown RBP13.52□□□□□ -0.25
CNNM3-203ENST00000465224 POLR1AO95602 1720 aaPredicted RBP13.52□□□□□ -0.25
CNNM3-203ENST00000465224 NUP155O75694 1391 aa13.52□□□□□ -0.25
CNNM3-203ENST00000465224 ABCC10Q5T3U5 1492 aa13.52□□□□□ -0.25
CNNM3-203ENST00000465224 CDC42BPAQ5VT25 1732 aa13.51□□□□□ -0.25
CNNM3-203ENST00000465224 HNRNPMP52272 730 aaKnown RBP eCLIP13.51□□□□□ -0.25
CNNM3-203ENST00000465224 ABCA8O94911 1581 aa13.51□□□□□ -0.25
CNNM3-203ENST00000465224 ZBED9Q6R2W3 1325 aa13.5□□□□□ -0.25
CNNM3-203ENST00000465224 SHROOM2Q13796 1616 aa13.5□□□□□ -0.25
CNNM3-203ENST00000465224 C9orf84Q5VXU9 1444 aa13.5□□□□□ -0.25
CNNM3-203ENST00000465224 CLASP1Q7Z460 1538 aa13.49□□□□□ -0.25
CNNM3-203ENST00000465224 ERCC6L2Q5T890 1561 aa13.48□□□□□ -0.25
CNNM3-203ENST00000465224 PAK3O75914 559 aaPredicted RBP13.47□□□□□ -0.25
CNNM3-203ENST00000465224 KDM2AQ9Y2K7 1162 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms