RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 YEATS2Q9ULM3 1422 aa37.35■■■■□ 3.57
USP42-205ENST00000465073 TROQ12816 1431 aaPredicted RBP37.34■■■■□ 3.57
USP42-205ENST00000465073 CLIP1P30622 1438 aa37.3■■■■□ 3.56
USP42-205ENST00000465073 KIF14Q15058 1648 aa37.28■■■■□ 3.56
USP42-205ENST00000465073 MYO5CQ9NQX4 1742 aa37.28■■■■□ 3.56
USP42-205ENST00000465073 RIMS1Q86UR5 1692 aaKnown RBP37.22■■■■□ 3.55
USP42-205ENST00000465073 CASKIN1Q8WXD9 1431 aa37.2■■■■□ 3.55
USP42-205ENST00000465073 PCF11O94913 1555 aaKnown RBP37.19■■■■□ 3.54
USP42-205ENST00000465073 ATP10AO60312 1499 aa37.19■■■■□ 3.54
USP42-205ENST00000465073 ARHGAP5Q13017 1502 aa37.18■■■■□ 3.54
USP42-205ENST00000465073 SIGLEC1Q9BZZ2 1709 aa37.17■■■■□ 3.54
USP42-205ENST00000465073 MLECQ14165 292 aa37.17■■■■□ 3.54
USP42-205ENST00000465073 LRRIQ1Q96JM4 1722 aa37.17■■■■□ 3.54
USP42-205ENST00000465073 CCDC18Q5T9S5 1454 aa37.16■■■■□ 3.54
USP42-205ENST00000465073 LMTK3Q96Q04 1460 aa37.16■■■■□ 3.54
USP42-205ENST00000465073 ZNF518AQ6AHZ1 1483 aa37.15■■■■□ 3.54
USP42-205ENST00000465073 C9orf84Q5VXU9 1444 aa37.13■■■■□ 3.53
USP42-205ENST00000465073 AFAP1Q8N556 730 aa37.13■■■■□ 3.53
USP42-205ENST00000465073 PLPPR3Q6T4P5 718 aa37.09■■■■□ 3.53
USP42-205ENST00000465073 KDM5CP41229 1560 aa37.05■■■■□ 3.52
USP42-205ENST00000465073 FYCO1Q9BQS8 1478 aa37.03■■■■□ 3.52
USP42-205ENST00000465073 MYT1LQ9UL68 1186 aa37.03■■■■□ 3.52
USP42-205ENST00000465073 ARHGEF12Q9NZN5 1544 aa37.02■■■■□ 3.52
USP42-205ENST00000465073 FER1L4A9Z1Z3 1794 aa37.01■■■■□ 3.51
USP42-205ENST00000465073 CDC42BPBQ9Y5S2 1711 aa37.01■■■■□ 3.51
USP42-205ENST00000465073 PREX2Q70Z35 1606 aa36.98■■■■□ 3.51
USP42-205ENST00000465073 HSPA2P54652 639 aa36.97■■■■□ 3.51
USP42-205ENST00000465073 MLH3Q9UHC1 1453 aa36.96■■■■□ 3.51
USP42-205ENST00000465073 FBXO41Q8TF61 875 aa36.95■■■■□ 3.51
USP42-205ENST00000465073 TRAPPC8Q9Y2L5 1435 aa36.92■■■■□ 3.5
USP42-205ENST00000465073 ABCC1P33527 1531 aa36.92■■■■□ 3.5
USP42-205ENST00000465073 DIP2CQ9Y2E4 1556 aa36.91■■■■□ 3.5
USP42-205ENST00000465073 REREQ9P2R6 1566 aa36.89■■■■□ 3.5
USP42-205ENST00000465073 CEBPAP49715 358 aaPredicted RBP36.86■■■■□ 3.49
USP42-205ENST00000465073 ABCA6Q8N139 1617 aa36.83■■■■□ 3.49
USP42-205ENST00000465073 CDC42BPAQ5VT25 1732 aa36.83■■■■□ 3.49
USP42-205ENST00000465073 ITSN2Q9NZM3 1697 aa36.83■■■■□ 3.49
USP42-205ENST00000465073 ZNF777Q9ULD5 760 aaPredicted RBP36.82■■■■□ 3.48
USP42-205ENST00000465073 AGLP35573 1532 aa36.8■■■■□ 3.48
USP42-205ENST00000465073 GPATCH8Q9UKJ3 1502 aaKnown RBP36.79■■■■□ 3.48
USP42-205ENST00000465073 ESF1Q9H501 851 aaKnown RBP36.74■■■■□ 3.47
USP42-205ENST00000465073 PREX1Q8TCU6 1659 aa36.74■■■■□ 3.47
USP42-205ENST00000465073 KIDINS220Q9ULH0 1771 aa36.73■■■■□ 3.47
USP42-205ENST00000465073 CFDP1Q9UEE9 299 aaPredicted RBP36.72■■■■□ 3.47
USP42-205ENST00000465073 SAMD9LQ8IVG5 1584 aa36.72■■■■□ 3.47
USP42-205ENST00000465073 HNRNPMP52272 730 aaKnown RBP eCLIP36.71■■■■□ 3.471e-6■■■□□ 14.6
USP42-205ENST00000465073 MTUS2Q5JR59 1369 aa36.7■■■■□ 3.47
USP42-205ENST00000465073 CCNB3Q8WWL7 1395 aa36.7■■■■□ 3.47
USP42-205ENST00000465073 KIAA1107Q9UPP5 1409 aa36.69■■■■□ 3.46
USP42-205ENST00000465073 SPAG9O60271 1321 aaKnown RBP36.69■■■■□ 3.46
USP42-205ENST00000465073 SYCP2Q9BX26 1530 aa36.68■■■■□ 3.46
USP42-205ENST00000465073 UHRF1BP1Q6BDS2 1440 aa36.68■■■■□ 3.46
USP42-205ENST00000465073 PLEKHH2Q8IVE3 1493 aa36.67■■■■□ 3.46
USP42-205ENST00000465073 SETD1BQ9UPS6 1966 aaKnown RBP36.66■■■■□ 3.46
USP42-205ENST00000465073 CNTLNQ9NXG0 1405 aa36.63■■■■□ 3.45
USP42-205ENST00000465073 DMRT2Q9Y5R5 561 aa36.6■■■■□ 3.45
USP42-205ENST00000465073 C3P01024 1663 aa36.59■■■■□ 3.45
USP42-205ENST00000465073 CERKQ8TCT0 537 aa36.58■■■■□ 3.45
USP42-205ENST00000465073 CEP162Q5TB80 1403 aa36.56■■■■□ 3.44
USP42-205ENST00000465073 ATP7AQ04656 1500 aa36.55■■■■□ 3.44
USP42-205ENST00000465073 EHBP1L1Q8N3D4 1523 aa36.51■■■■□ 3.44
USP42-205ENST00000465073 A2MP01023 1474 aa36.49■■■■□ 3.43
USP42-205ENST00000465073 INO80Q9ULG1 1556 aaPredicted RBP36.49■■■■□ 3.43
USP42-205ENST00000465073 ZNF644Q9H582 1327 aaPredicted RBP36.48■■■■□ 3.43
USP42-205ENST00000465073 STRCQ7RTU9 1775 aa36.48■■■■□ 3.43
USP42-205ENST00000465073 TIAM1Q13009 1591 aa36.48■■■■□ 3.43
USP42-205ENST00000465073 ZMYM3Q14202 1370 aa36.45■■■■□ 3.43
USP42-205ENST00000465073 NPATQ14207 1427 aa36.45■■■■□ 3.43
USP42-205ENST00000465073 SUPT6HQ7KZ85 1726 aaKnown RBP36.44■■■■□ 3.42
USP42-205ENST00000465073 PLXNC1O60486 1568 aa36.44■■■■□ 3.42
USP42-205ENST00000465073 MROH2AA6NES4 1674 aa36.42■■■■□ 3.42
USP42-205ENST00000465073 MBD5Q9P267 1494 aa36.42■■■■□ 3.42
USP42-205ENST00000465073 PTPRTO14522 1441 aa36.4■■■■□ 3.42
USP42-205ENST00000465073 GGT6Q6P531 493 aa36.37■■■■□ 3.41
USP42-205ENST00000465073 PPP6R1Q9UPN7 881 aa36.37■■■■□ 3.41
USP42-205ENST00000465073 RTEL1-TNFRSF6BF6WH68 1400 aa36.36■■■■□ 3.41
USP42-205ENST00000465073 ADGBQ8N7X0 1667 aa36.33■■■■□ 3.41
USP42-205ENST00000465073 NCOA2Q15596 1464 aa36.31■■■■□ 3.4
USP42-205ENST00000465073 NCOA1Q15788 1441 aa36.31■■■■□ 3.4
USP42-205ENST00000465073 RSPH4AQ5TD94 716 aa36.29■■■■□ 3.4
USP42-205ENST00000465073 CLTCQ00610 1675 aaKnown RBP36.29■■■■□ 3.4
USP42-205ENST00000465073 DHX29Q7Z478 1369 aaKnown RBP36.28■■■■□ 3.4
USP42-205ENST00000465073 PTPRKQ15262 1439 aa36.26■■■■□ 3.39
USP42-205ENST00000465073 CCDC141Q6ZP82 1450 aa36.24■■■■□ 3.39
USP42-205ENST00000465073 CAMSAP1Q5T5Y3 1602 aa36.22■■■■□ 3.39
USP42-205ENST00000465073 LOC105371045A0A1W2PR82 267 aa36.22■■■■□ 3.39
USP42-205ENST00000465073 CAMSAP2Q08AD1 1489 aa36.22■■■■□ 3.39
USP42-205ENST00000465073 VPS8Q8N3P4 1428 aa36.2■■■■□ 3.38
USP42-205ENST00000465073 KIF3BO15066 747 aa36.17■■■■□ 3.38
USP42-205ENST00000465073 NCKAP5LQ9HCH0 1330 aa36.14■■■■□ 3.38
USP42-205ENST00000465073 MYO3AQ8NEV4 1616 aa36.14■■■■□ 3.38
USP42-205ENST00000465073 LRRC9Q6ZRR7 1453 aa36.13■■■■□ 3.38
USP42-205ENST00000465073 TSPY4P0CV99 314 aa36.13■■■■□ 3.37
USP42-205ENST00000465073 TSPY10P0CW01 314 aa36.13■■■■□ 3.37
USP42-205ENST00000465073 PKD2Q13563 968 aa36.12■■■■□ 3.37
USP42-205ENST00000465073 ZNF142P52746 1687 aaPredicted RBP36.12■■■■□ 3.37
USP42-205ENST00000465073 LTBP4Q8N2S1 1624 aa36.12■■■■□ 3.37
USP42-205ENST00000465073 PLA2R1Q13018 1463 aa36.11■■■■□ 3.37
USP42-205ENST00000465073 CEP170BQ9Y4F5 1589 aaPredicted RBP36.11■■■■□ 3.37
USP42-205ENST00000465073 ARHGEF5Q12774 1597 aa36.09■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms