RNA–Protein interactions for RNA: ENST00000463936.1

RTN4R-204, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-204ENST00000463936 POGZQ7Z3K3 1410 aa23.73■■□□□ 1.39
RTN4R-204ENST00000463936 ZFYVE16Q7Z3T8 1539 aa23.73■■□□□ 1.39
RTN4R-204ENST00000463936 MYO5CQ9NQX4 1742 aa23.7■■□□□ 1.39
RTN4R-204ENST00000463936 TROQ12816 1431 aaPredicted RBP23.7■■□□□ 1.38
RTN4R-204ENST00000463936 MAGI2Q86UL8 1455 aa23.68■■□□□ 1.38
RTN4R-204ENST00000463936 LMTK3Q96Q04 1460 aa23.68■■□□□ 1.38
RTN4R-204ENST00000463936 EFCAB2Q5VUJ9 269 aa23.68■■□□□ 1.38
RTN4R-204ENST00000463936 MLECQ14165 292 aa23.65■■□□□ 1.38
RTN4R-204ENST00000463936 AFAP1Q8N556 730 aa23.65■■□□□ 1.38
RTN4R-204ENST00000463936 CDK11AQ9UQ88 783 aaPredicted RBP23.65■■□□□ 1.38
RTN4R-204ENST00000463936 PCF11O94913 1555 aaKnown RBP23.65■■□□□ 1.38
RTN4R-204ENST00000463936 CDC42BPBQ9Y5S2 1711 aa23.64■■□□□ 1.37
RTN4R-204ENST00000463936 CASKIN1Q8WXD9 1431 aa23.62■■□□□ 1.37
RTN4R-204ENST00000463936 PLPPR3Q6T4P5 718 aa23.62■■□□□ 1.37
RTN4R-204ENST00000463936 ATP10AO60312 1499 aa23.62■■□□□ 1.37
RTN4R-204ENST00000463936 ARHGAP5Q13017 1502 aa23.6■■□□□ 1.37
RTN4R-204ENST00000463936 HSPA2P54652 639 aa23.6■■□□□ 1.37
RTN4R-204ENST00000463936 ARHGEF12Q9NZN5 1544 aa23.59■■□□□ 1.37
RTN4R-204ENST00000463936 KDM5CP41229 1560 aa23.58■■□□□ 1.37
RTN4R-204ENST00000463936 CLIP1P30622 1438 aa23.56■■□□□ 1.36
RTN4R-204ENST00000463936 C9orf84Q5VXU9 1444 aa23.56■■□□□ 1.36
RTN4R-204ENST00000463936 FER1L4A9Z1Z3 1794 aa23.55■■□□□ 1.36
RTN4R-204ENST00000463936 TRAPPC8Q9Y2L5 1435 aa23.55■■□□□ 1.36
RTN4R-204ENST00000463936 ZNF518AQ6AHZ1 1483 aa23.55■■□□□ 1.36
RTN4R-204ENST00000463936 PREX2Q70Z35 1606 aa23.53■■□□□ 1.36
RTN4R-204ENST00000463936 CEBPAP49715 358 aaPredicted RBP23.53■■□□□ 1.36
RTN4R-204ENST00000463936 DIP2CQ9Y2E4 1556 aa23.52■■□□□ 1.36
RTN4R-204ENST00000463936 CCDC18Q5T9S5 1454 aa23.51■■□□□ 1.35
RTN4R-204ENST00000463936 CDC42BPAQ5VT25 1732 aa23.5■■□□□ 1.35
RTN4R-204ENST00000463936 ABCC1P33527 1531 aa23.49■■□□□ 1.35
RTN4R-204ENST00000463936 ABCA6Q8N139 1617 aa23.49■■□□□ 1.35
RTN4R-204ENST00000463936 FYCO1Q9BQS8 1478 aa23.48■■□□□ 1.35
RTN4R-204ENST00000463936 MLH3Q9UHC1 1453 aa23.48■■□□□ 1.35
RTN4R-204ENST00000463936 ITSN2Q9NZM3 1697 aa23.47■■□□□ 1.35
RTN4R-204ENST00000463936 FBXO41Q8TF61 875 aa23.44■■□□□ 1.34
RTN4R-204ENST00000463936 KIDINS220Q9ULH0 1771 aa23.43■■□□□ 1.34
RTN4R-204ENST00000463936 REREQ9P2R6 1566 aa23.43■■□□□ 1.34
RTN4R-204ENST00000463936 GPATCH8Q9UKJ3 1502 aaKnown RBP23.43■■□□□ 1.34
RTN4R-204ENST00000463936 SAMD9LQ8IVG5 1584 aa23.42■■□□□ 1.34
RTN4R-204ENST00000463936 MYT1LQ9UL68 1186 aa23.41■■□□□ 1.34
RTN4R-204ENST00000463936 ZNF777Q9ULD5 760 aaPredicted RBP23.38■■□□□ 1.33
RTN4R-204ENST00000463936 HNRNPMP52272 730 aaKnown RBP eCLIP23.37■■□□□ 1.33
RTN4R-204ENST00000463936 AGLP35573 1532 aa23.37■■□□□ 1.33
RTN4R-204ENST00000463936 PREX1Q8TCU6 1659 aa23.35■■□□□ 1.33
RTN4R-204ENST00000463936 SYCP2Q9BX26 1530 aa23.34■■□□□ 1.33
RTN4R-204ENST00000463936 C3P01024 1663 aa23.34■■□□□ 1.33
RTN4R-204ENST00000463936 STRCQ7RTU9 1775 aa23.33■■□□□ 1.33
RTN4R-204ENST00000463936 ZNF644Q9H582 1327 aaPredicted RBP23.3■■□□□ 1.32
RTN4R-204ENST00000463936 CFDP1Q9UEE9 299 aaPredicted RBP23.27■■□□□ 1.32
RTN4R-204ENST00000463936 SETD1BQ9UPS6 1966 aaKnown RBP23.27■■□□□ 1.32
RTN4R-204ENST00000463936 KIAA1107Q9UPP5 1409 aa23.26■■□□□ 1.31
RTN4R-204ENST00000463936 SPAG9O60271 1321 aaKnown RBP23.26■■□□□ 1.31
RTN4R-204ENST00000463936 CCNB3Q8WWL7 1395 aa23.26■■□□□ 1.31
RTN4R-204ENST00000463936 TIAM1Q13009 1591 aa23.24■■□□□ 1.31
RTN4R-204ENST00000463936 CERKQ8TCT0 537 aa23.24■■□□□ 1.31
RTN4R-204ENST00000463936 SUPT6HQ7KZ85 1726 aaKnown RBP23.24■■□□□ 1.31
RTN4R-204ENST00000463936 MTUS2Q5JR59 1369 aa23.24■■□□□ 1.31
RTN4R-204ENST00000463936 UHRF1BP1Q6BDS2 1440 aa23.24■■□□□ 1.31
RTN4R-204ENST00000463936 INO80Q9ULG1 1556 aaPredicted RBP23.23■■□□□ 1.31
RTN4R-204ENST00000463936 CEP162Q5TB80 1403 aa23.23■■□□□ 1.31
RTN4R-204ENST00000463936 ATP7AQ04656 1500 aa23.23■■□□□ 1.31
RTN4R-204ENST00000463936 MBD5Q9P267 1494 aa23.21■■□□□ 1.31
RTN4R-204ENST00000463936 PLXNC1O60486 1568 aa23.2■■□□□ 1.3
RTN4R-204ENST00000463936 PLEKHH2Q8IVE3 1493 aa23.17■■□□□ 1.3
RTN4R-204ENST00000463936 ZMYM3Q14202 1370 aa23.17■■□□□ 1.3
RTN4R-204ENST00000463936 A2MP01023 1474 aa23.17■■□□□ 1.3
RTN4R-204ENST00000463936 LOC105371045A0A1W2PR82 267 aa23.16■■□□□ 1.3
RTN4R-204ENST00000463936 ESF1Q9H501 851 aaKnown RBP23.16■■□□□ 1.3
RTN4R-204ENST00000463936 EHBP1L1Q8N3D4 1523 aa23.16■■□□□ 1.3
RTN4R-204ENST00000463936 CNTLNQ9NXG0 1405 aa23.16■■□□□ 1.3
RTN4R-204ENST00000463936 MROH2AA6NES4 1674 aa23.14■■□□□ 1.29
RTN4R-204ENST00000463936 CLTCQ00610 1675 aaKnown RBP23.13■■□□□ 1.29
RTN4R-204ENST00000463936 GGT6Q6P531 493 aa23.1■■□□□ 1.29
RTN4R-204ENST00000463936 NCOA2Q15596 1464 aa23.1■■□□□ 1.29
RTN4R-204ENST00000463936 PTPRTO14522 1441 aa23.09■■□□□ 1.29
RTN4R-204ENST00000463936 NPATQ14207 1427 aa23.09■■□□□ 1.29
RTN4R-204ENST00000463936 DMRT2Q9Y5R5 561 aa23.09■■□□□ 1.29
RTN4R-204ENST00000463936 NCOA1Q15788 1441 aa23.08■■□□□ 1.29
RTN4R-204ENST00000463936 PTPRKQ15262 1439 aa23.08■■□□□ 1.28
RTN4R-204ENST00000463936 ADGBQ8N7X0 1667 aa23.07■■□□□ 1.28
RTN4R-204ENST00000463936 LTBP4Q8N2S1 1624 aa23.06■■□□□ 1.28
RTN4R-204ENST00000463936 CAMSAP1Q5T5Y3 1602 aa23.05■■□□□ 1.28
RTN4R-204ENST00000463936 RTEL1-TNFRSF6BF6WH68 1400 aa23.05■■□□□ 1.28
RTN4R-204ENST00000463936 DHX29Q7Z478 1369 aaKnown RBP23.03■■□□□ 1.28
RTN4R-204ENST00000463936 CAMSAP2Q08AD1 1489 aa23.03■■□□□ 1.28
RTN4R-204ENST00000463936 NCKAP5LQ9HCH0 1330 aa23.03■■□□□ 1.28
RTN4R-204ENST00000463936 MYO3AQ8NEV4 1616 aa23■■□□□ 1.27
RTN4R-204ENST00000463936 KANK4Q5T7N3 995 aaPredicted RBP23■■□□□ 1.27
RTN4R-204ENST00000463936 CCDC141Q6ZP82 1450 aa22.98■■□□□ 1.27
RTN4R-204ENST00000463936 ZNF142P52746 1687 aaPredicted RBP22.97■■□□□ 1.27
RTN4R-204ENST00000463936 FBXO31Q5XUX0 539 aaPredicted RBP22.97■■□□□ 1.27
RTN4R-204ENST00000463936 PPP6R1Q9UPN7 881 aa22.97■■□□□ 1.27
RTN4R-204ENST00000463936 VPS8Q8N3P4 1428 aa22.97■■□□□ 1.27
RTN4R-204ENST00000463936 LRRC9Q6ZRR7 1453 aa22.97■■□□□ 1.27
RTN4R-204ENST00000463936 KIF3BO15066 747 aa22.96■■□□□ 1.27
RTN4R-204ENST00000463936 CEP170BQ9Y4F5 1589 aaPredicted RBP22.96■■□□□ 1.27
RTN4R-204ENST00000463936 ARHGEF5Q12774 1597 aa22.93■■□□□ 1.26
RTN4R-204ENST00000463936 TCOF1Q13428 1488 aaKnown RBP22.92■■□□□ 1.26
RTN4R-204ENST00000463936 ZNF335Q9H4Z2 1342 aaPredicted RBP22.92■■□□□ 1.26
RTN4R-204ENST00000463936 DNMT1P26358 1616 aaKnown RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms