RNA–Protein interactions for RNA: ENST00000463644.5

MECP2-207, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 1,088 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-207ENST00000463644 RAPGEF3O95398 923 aa18.43■□□□□ 0.54
MECP2-207ENST00000463644 CFAP74Q9C0B2 1584 aa18.42■□□□□ 0.54
MECP2-207ENST00000463644 MYO5CQ9NQX4 1742 aa18.41■□□□□ 0.54
MECP2-207ENST00000463644 EFCAB2Q5VUJ9 269 aa18.41■□□□□ 0.54
MECP2-207ENST00000463644 VPS8Q8N3P4 1428 aa18.4■□□□□ 0.54
MECP2-207ENST00000463644 DENND4BO75064 1496 aaPredicted RBP18.39■□□□□ 0.53
MECP2-207ENST00000463644 MTUS2Q5JR59 1369 aa18.38■□□□□ 0.53
MECP2-207ENST00000463644 ADGRL1O94910 1474 aa18.36■□□□□ 0.53
MECP2-207ENST00000463644 ARHGAP5Q13017 1502 aa18.36■□□□□ 0.53
MECP2-207ENST00000463644 FRMPD1Q5SYB0 1578 aa18.35■□□□□ 0.53
MECP2-207ENST00000463644 SCAPERQ9BY12 1400 aa18.35■□□□□ 0.53
MECP2-207ENST00000463644 CDC42BPBQ9Y5S2 1711 aa18.34■□□□□ 0.53
MECP2-207ENST00000463644 RICTORQ6R327 1708 aa18.33■□□□□ 0.52
MECP2-207ENST00000463644 KDM4FA0A1W2PPD8 638 aa18.33■□□□□ 0.52
MECP2-207ENST00000463644 PREX2Q70Z35 1606 aa18.33■□□□□ 0.52
MECP2-207ENST00000463644 EHBP1L1Q8N3D4 1523 aa18.32■□□□□ 0.52
MECP2-207ENST00000463644 CDC42BPAQ5VT25 1732 aa18.31■□□□□ 0.52
MECP2-207ENST00000463644 TIAM1Q13009 1591 aa18.3■□□□□ 0.52
MECP2-207ENST00000463644 GPATCH8Q9UKJ3 1502 aaKnown RBP18.3■□□□□ 0.52
MECP2-207ENST00000463644 POGZQ7Z3K3 1410 aa18.3■□□□□ 0.52
MECP2-207ENST00000463644 CCNB3Q8WWL7 1395 aa18.3■□□□□ 0.52
MECP2-207ENST00000463644 SCAF1Q9H7N4 1312 aaKnown RBP18.29■□□□□ 0.52
MECP2-207ENST00000463644 ZMYM4Q5VZL5 1548 aa18.28■□□□□ 0.52
MECP2-207ENST00000463644 CFDP1Q9UEE9 299 aaPredicted RBP18.26■□□□□ 0.51
MECP2-207ENST00000463644 ZNF777Q9ULD5 760 aaPredicted RBP18.26■□□□□ 0.51
MECP2-207ENST00000463644 MAP3K1Q13233 1512 aa18.26■□□□□ 0.51
MECP2-207ENST00000463644 MAGI2Q86UL8 1455 aa18.26■□□□□ 0.51
MECP2-207ENST00000463644 AFAP1Q8N556 730 aa18.25■□□□□ 0.51
MECP2-207ENST00000463644 ABCC1P33527 1531 aa18.24■□□□□ 0.51
MECP2-207ENST00000463644 ZNF518AQ6AHZ1 1483 aa18.24■□□□□ 0.51
MECP2-207ENST00000463644 LRRC9Q6ZRR7 1453 aa18.24■□□□□ 0.51
MECP2-207ENST00000463644 ARHGEF40Q8TER5 1519 aa18.23■□□□□ 0.51
MECP2-207ENST00000463644 ARHGEF12Q9NZN5 1544 aa18.23■□□□□ 0.51
MECP2-207ENST00000463644 ZFYVE16Q7Z3T8 1539 aa18.23■□□□□ 0.51
MECP2-207ENST00000463644 NCOA2Q15596 1464 aa18.22■□□□□ 0.51
MECP2-207ENST00000463644 KANK4Q5T7N3 995 aaPredicted RBP18.22■□□□□ 0.51
MECP2-207ENST00000463644 SUPT6HQ7KZ85 1726 aaKnown RBP18.22■□□□□ 0.51
MECP2-207ENST00000463644 YEATS2Q9ULM3 1422 aa18.22■□□□□ 0.51
MECP2-207ENST00000463644 SAMD9LQ8IVG5 1584 aa18.21■□□□□ 0.51
MECP2-207ENST00000463644 APLP2Q06481 763 aa18.21■□□□□ 0.51
MECP2-207ENST00000463644 TRAPPC8Q9Y2L5 1435 aa18.21■□□□□ 0.51
MECP2-207ENST00000463644 KDM5CP41229 1560 aa18.21■□□□□ 0.51
MECP2-207ENST00000463644 ITSN2Q9NZM3 1697 aa18.2■□□□□ 0.5
MECP2-207ENST00000463644 KIAA1107Q9UPP5 1409 aa18.18■□□□□ 0.5
MECP2-207ENST00000463644 HNRNPMP52272 730 aaKnown RBP eCLIP18.18■□□□□ 0.51e-6■■■■□ 24.3
MECP2-207ENST00000463644 PLEKHH2Q8IVE3 1493 aa18.18■□□□□ 0.5
MECP2-207ENST00000463644 ARID4BQ4LE39 1312 aaPredicted RBP18.18■□□□□ 0.5
MECP2-207ENST00000463644 MYT1LQ9UL68 1186 aa18.17■□□□□ 0.5
MECP2-207ENST00000463644 SYCP2Q9BX26 1530 aa18.17■□□□□ 0.5
MECP2-207ENST00000463644 MLH3Q9UHC1 1453 aa18.16■□□□□ 0.5
MECP2-207ENST00000463644 ZNF644Q9H582 1327 aaPredicted RBP18.16■□□□□ 0.5
MECP2-207ENST00000463644 ATP10AO60312 1499 aa18.15■□□□□ 0.5
MECP2-207ENST00000463644 HECW2Q9P2P5 1572 aa18.15■□□□□ 0.5
MECP2-207ENST00000463644 C9orf84Q5VXU9 1444 aa18.13■□□□□ 0.49
MECP2-207ENST00000463644 BCORL1Q5H9F3 1711 aa18.12■□□□□ 0.49
MECP2-207ENST00000463644 SIGLEC1Q9BZZ2 1709 aa18.11■□□□□ 0.49
MECP2-207ENST00000463644 ADAMTSL3P82987 1691 aa18.1■□□□□ 0.49
MECP2-207ENST00000463644 DIP2CQ9Y2E4 1556 aa18.1■□□□□ 0.49
MECP2-207ENST00000463644 MBD5Q9P267 1494 aa18.1■□□□□ 0.49
MECP2-207ENST00000463644 SPAG9O60271 1321 aaKnown RBP18.1■□□□□ 0.49
MECP2-207ENST00000463644 KIDINS220Q9ULH0 1771 aa18.09■□□□□ 0.49
MECP2-207ENST00000463644 ABCA6Q8N139 1617 aa18.09■□□□□ 0.49
MECP2-207ENST00000463644 CAMSAP2Q08AD1 1489 aa18.07■□□□□ 0.48
MECP2-207ENST00000463644 MYOM3Q5VTT5 1437 aa18.07■□□□□ 0.48
MECP2-207ENST00000463644 REREQ9P2R6 1566 aa18.06■□□□□ 0.48
MECP2-207ENST00000463644 MLECQ14165 292 aa18.06■□□□□ 0.48
MECP2-207ENST00000463644 RSPH4AQ5TD94 716 aa18.06■□□□□ 0.48
MECP2-207ENST00000463644 MIA2Q96PC5 1412 aa18.06■□□□□ 0.48
MECP2-207ENST00000463644 ATP7AQ04656 1500 aa18.04■□□□□ 0.48
MECP2-207ENST00000463644 MADDQ8WXG6 1647 aa18.04■□□□□ 0.48
MECP2-207ENST00000463644 INO80Q9ULG1 1556 aaPredicted RBP18.04■□□□□ 0.48
MECP2-207ENST00000463644 PTPRMP28827 1452 aa18.03■□□□□ 0.48
MECP2-207ENST00000463644 CCDC141Q6ZP82 1450 aa18.02■□□□□ 0.48
MECP2-207ENST00000463644 CACNB1Q02641 598 aaPredicted RBP18.02■□□□□ 0.48
MECP2-207ENST00000463644 RTEL1-TNFRSF6BF6WH68 1400 aa18.01■□□□□ 0.47
MECP2-207ENST00000463644 AGLP35573 1532 aa18.01■□□□□ 0.47
MECP2-207ENST00000463644 ARHGEF5Q12774 1597 aa18■□□□□ 0.47
MECP2-207ENST00000463644 TSPY4P0CV99 314 aa17.99■□□□□ 0.47
MECP2-207ENST00000463644 TSPY10P0CW01 314 aa17.99■□□□□ 0.47
MECP2-207ENST00000463644 RIMS1Q86UR5 1692 aaKnown RBP17.98■□□□□ 0.47
MECP2-207ENST00000463644 A2MP01023 1474 aa17.97■□□□□ 0.47
MECP2-207ENST00000463644 FGD6Q6ZV73 1430 aa17.96■□□□□ 0.47
MECP2-207ENST00000463644 FER1L4A9Z1Z3 1794 aa17.95■□□□□ 0.46
MECP2-207ENST00000463644 PTPN23Q9H3S7 1636 aa17.94■□□□□ 0.46
MECP2-207ENST00000463644 ADGBQ8N7X0 1667 aa17.94■□□□□ 0.46
MECP2-207ENST00000463644 PLXNC1O60486 1568 aa17.94■□□□□ 0.46
MECP2-207ENST00000463644 DHX29Q7Z478 1369 aaKnown RBP17.92■□□□□ 0.46
MECP2-207ENST00000463644 TCOF1Q13428 1488 aaKnown RBP17.92■□□□□ 0.46
MECP2-207ENST00000463644 MAST1Q9Y2H9 1570 aa17.91■□□□□ 0.46
MECP2-207ENST00000463644 ESF1Q9H501 851 aaKnown RBP17.9■□□□□ 0.46
MECP2-207ENST00000463644 ABCC5O15440 1437 aa17.89■□□□□ 0.45
MECP2-207ENST00000463644 CEBPAP49715 358 aaPredicted RBP17.88■□□□□ 0.45
MECP2-207ENST00000463644 GGT6Q6P531 493 aa17.88■□□□□ 0.45
MECP2-207ENST00000463644 PPARGC1BQ86YN6 1023 aaKnown RBP17.88■□□□□ 0.45
MECP2-207ENST00000463644 DAPK1P53355 1430 aa17.86■□□□□ 0.45
MECP2-207ENST00000463644 KIF3BO15066 747 aa17.85■□□□□ 0.45
MECP2-207ENST00000463644 DNMT1P26358 1616 aaKnown RBP17.85■□□□□ 0.45
MECP2-207ENST00000463644 CNTLNQ9NXG0 1405 aa17.85■□□□□ 0.45
MECP2-207ENST00000463644 SHANK2Q9UPX8 1470 aa17.85■□□□□ 0.45
MECP2-207ENST00000463644 DCAF8L1A6NGE4 600 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms