RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 RIMS1Q86UR5 1692 aaKnown RBP25.19■■□□□ 1.62
CMSS1-202ENST00000463526 HECW1Q76N89 1606 aa25.19■■□□□ 1.62
CMSS1-202ENST00000463526 ZMYM4Q5VZL5 1548 aa25.18■■□□□ 1.62
CMSS1-202ENST00000463526 HSPA2P54652 639 aa25.16■■□□□ 1.62
CMSS1-202ENST00000463526 MAGI2Q86UL8 1455 aa25.15■■□□□ 1.62
CMSS1-202ENST00000463526 PCF11O94913 1555 aaKnown RBP25.15■■□□□ 1.62
CMSS1-202ENST00000463526 LMTK3Q96Q04 1460 aa25.14■■□□□ 1.61
CMSS1-202ENST00000463526 MYT1LQ9UL68 1186 aa25.13■■□□□ 1.61
CMSS1-202ENST00000463526 SIGLEC1Q9BZZ2 1709 aa25.12■■□□□ 1.61
CMSS1-202ENST00000463526 TROQ12816 1431 aaPredicted RBP25.12■■□□□ 1.61
CMSS1-202ENST00000463526 FBXO41Q8TF61 875 aa25.11■■□□□ 1.61
CMSS1-202ENST00000463526 KIF14Q15058 1648 aa25.11■■□□□ 1.61
CMSS1-202ENST00000463526 AFAP1Q8N556 730 aa25.1■■□□□ 1.61
CMSS1-202ENST00000463526 CLIP1P30622 1438 aa25.09■■□□□ 1.61
CMSS1-202ENST00000463526 ATP10AO60312 1499 aa25.09■■□□□ 1.61
CMSS1-202ENST00000463526 ARHGAP5Q13017 1502 aa25.07■■□□□ 1.6
CMSS1-202ENST00000463526 MYO5CQ9NQX4 1742 aa25.07■■□□□ 1.6
CMSS1-202ENST00000463526 C9orf84Q5VXU9 1444 aa25.04■■□□□ 1.6
CMSS1-202ENST00000463526 CEBPAP49715 358 aaPredicted RBP25.03■■□□□ 1.6
CMSS1-202ENST00000463526 ZNF518AQ6AHZ1 1483 aa25.01■■□□□ 1.59
CMSS1-202ENST00000463526 LRRIQ1Q96JM4 1722 aa24.99■■□□□ 1.59
CMSS1-202ENST00000463526 FER1L4A9Z1Z3 1794 aa24.98■■□□□ 1.59
CMSS1-202ENST00000463526 CASKIN1Q8WXD9 1431 aa24.97■■□□□ 1.59
CMSS1-202ENST00000463526 ARHGEF12Q9NZN5 1544 aa24.96■■□□□ 1.59
CMSS1-202ENST00000463526 CCDC18Q5T9S5 1454 aa24.93■■□□□ 1.58
CMSS1-202ENST00000463526 TRAPPC8Q9Y2L5 1435 aa24.93■■□□□ 1.58
CMSS1-202ENST00000463526 ZNF777Q9ULD5 760 aaPredicted RBP24.92■■□□□ 1.58
CMSS1-202ENST00000463526 KDM5CP41229 1560 aa24.92■■□□□ 1.58
CMSS1-202ENST00000463526 CDC42BPBQ9Y5S2 1711 aa24.9■■□□□ 1.58
CMSS1-202ENST00000463526 DIP2CQ9Y2E4 1556 aa24.88■■□□□ 1.57
CMSS1-202ENST00000463526 ESF1Q9H501 851 aaKnown RBP24.87■■□□□ 1.57
CMSS1-202ENST00000463526 MLH3Q9UHC1 1453 aa24.86■■□□□ 1.57
CMSS1-202ENST00000463526 PREX2Q70Z35 1606 aa24.85■■□□□ 1.57
CMSS1-202ENST00000463526 ABCC1P33527 1531 aa24.85■■□□□ 1.57
CMSS1-202ENST00000463526 CERKQ8TCT0 537 aa24.84■■□□□ 1.57
CMSS1-202ENST00000463526 ABCA6Q8N139 1617 aa24.83■■□□□ 1.57
CMSS1-202ENST00000463526 FYCO1Q9BQS8 1478 aa24.83■■□□□ 1.56
CMSS1-202ENST00000463526 HNRNPMP52272 730 aaKnown RBP eCLIP24.81■■□□□ 1.567e-7■■■■■ 41.5
CMSS1-202ENST00000463526 UHRF1BP1Q6BDS2 1440 aa24.79■■□□□ 1.56
CMSS1-202ENST00000463526 PREX1Q8TCU6 1659 aa24.78■■□□□ 1.56
CMSS1-202ENST00000463526 ITSN2Q9NZM3 1697 aa24.78■■□□□ 1.56
CMSS1-202ENST00000463526 REREQ9P2R6 1566 aa24.77■■□□□ 1.56
CMSS1-202ENST00000463526 CDC42BPAQ5VT25 1732 aa24.77■■□□□ 1.56
CMSS1-202ENST00000463526 CFDP1Q9UEE9 299 aaPredicted RBP24.76■■□□□ 1.55
CMSS1-202ENST00000463526 SPAG9O60271 1321 aaKnown RBP24.76■■□□□ 1.55
CMSS1-202ENST00000463526 GPATCH8Q9UKJ3 1502 aaKnown RBP24.76■■□□□ 1.55
CMSS1-202ENST00000463526 AGLP35573 1532 aa24.75■■□□□ 1.55
CMSS1-202ENST00000463526 DMRT2Q9Y5R5 561 aa24.74■■□□□ 1.55
CMSS1-202ENST00000463526 KIDINS220Q9ULH0 1771 aa24.73■■□□□ 1.55
CMSS1-202ENST00000463526 CCNB3Q8WWL7 1395 aa24.72■■□□□ 1.55
CMSS1-202ENST00000463526 SAMD9LQ8IVG5 1584 aa24.71■■□□□ 1.55
CMSS1-202ENST00000463526 SYCP2Q9BX26 1530 aa24.71■■□□□ 1.55
CMSS1-202ENST00000463526 SETD1BQ9UPS6 1966 aaKnown RBP24.71■■□□□ 1.55
CMSS1-202ENST00000463526 MTUS2Q5JR59 1369 aa24.7■■□□□ 1.55
CMSS1-202ENST00000463526 C3P01024 1663 aa24.69■■□□□ 1.54
CMSS1-202ENST00000463526 STRCQ7RTU9 1775 aa24.66■■□□□ 1.54
CMSS1-202ENST00000463526 CNTLNQ9NXG0 1405 aa24.66■■□□□ 1.54
CMSS1-202ENST00000463526 ZNF644Q9H582 1327 aaPredicted RBP24.64■■□□□ 1.54
CMSS1-202ENST00000463526 KIAA1107Q9UPP5 1409 aa24.63■■□□□ 1.53
CMSS1-202ENST00000463526 GGT6Q6P531 493 aa24.63■■□□□ 1.53
CMSS1-202ENST00000463526 ZMYM3Q14202 1370 aa24.63■■□□□ 1.53
CMSS1-202ENST00000463526 PLEKHH2Q8IVE3 1493 aa24.62■■□□□ 1.53
CMSS1-202ENST00000463526 ATP7AQ04656 1500 aa24.61■■□□□ 1.53
CMSS1-202ENST00000463526 SUPT6HQ7KZ85 1726 aaKnown RBP24.6■■□□□ 1.53
CMSS1-202ENST00000463526 A2MP01023 1474 aa24.58■■□□□ 1.53
CMSS1-202ENST00000463526 PTPRTO14522 1441 aa24.58■■□□□ 1.53
CMSS1-202ENST00000463526 NPATQ14207 1427 aa24.54■■□□□ 1.52
CMSS1-202ENST00000463526 NCOA1Q15788 1441 aa24.53■■□□□ 1.52
CMSS1-202ENST00000463526 CEP162Q5TB80 1403 aa24.53■■□□□ 1.52
CMSS1-202ENST00000463526 INO80Q9ULG1 1556 aaPredicted RBP24.53■■□□□ 1.52
CMSS1-202ENST00000463526 NCKAP5LQ9HCH0 1330 aa24.53■■□□□ 1.52
CMSS1-202ENST00000463526 TIAM1Q13009 1591 aa24.51■■□□□ 1.51
CMSS1-202ENST00000463526 EHBP1L1Q8N3D4 1523 aa24.51■■□□□ 1.51
CMSS1-202ENST00000463526 PLXNC1O60486 1568 aa24.5■■□□□ 1.51
CMSS1-202ENST00000463526 CLTCQ00610 1675 aaKnown RBP24.5■■□□□ 1.51
CMSS1-202ENST00000463526 MBD5Q9P267 1494 aa24.49■■□□□ 1.51
CMSS1-202ENST00000463526 CAMSAP1Q5T5Y3 1602 aa24.49■■□□□ 1.51
CMSS1-202ENST00000463526 MROH2AA6NES4 1674 aa24.49■■□□□ 1.51
CMSS1-202ENST00000463526 PTPRKQ15262 1439 aa24.46■■□□□ 1.51
CMSS1-202ENST00000463526 PPP6R1Q9UPN7 881 aa24.45■■□□□ 1.5
CMSS1-202ENST00000463526 KIF3BO15066 747 aa24.44■■□□□ 1.5
CMSS1-202ENST00000463526 DHX29Q7Z478 1369 aaKnown RBP24.43■■□□□ 1.5
CMSS1-202ENST00000463526 LTBP4Q8N2S1 1624 aa24.43■■□□□ 1.5
CMSS1-202ENST00000463526 NCOA2Q15596 1464 aa24.42■■□□□ 1.5
CMSS1-202ENST00000463526 RTEL1-TNFRSF6BF6WH68 1400 aa24.42■■□□□ 1.5
CMSS1-202ENST00000463526 ADGBQ8N7X0 1667 aa24.4■■□□□ 1.5
CMSS1-202ENST00000463526 ZNF335Q9H4Z2 1342 aaPredicted RBP24.4■■□□□ 1.5
CMSS1-202ENST00000463526 LOC105371045A0A1W2PR82 267 aa24.4■■□□□ 1.5
CMSS1-202ENST00000463526 PKD2Q13563 968 aa24.39■■□□□ 1.49
CMSS1-202ENST00000463526 DISP3Q9P2K9 1392 aa24.39■■□□□ 1.49
CMSS1-202ENST00000463526 FBXO31Q5XUX0 539 aaPredicted RBP24.38■■□□□ 1.49
CMSS1-202ENST00000463526 MYO3AQ8NEV4 1616 aa24.37■■□□□ 1.49
CMSS1-202ENST00000463526 CAMSAP2Q08AD1 1489 aa24.37■■□□□ 1.49
CMSS1-202ENST00000463526 CCDC141Q6ZP82 1450 aa24.37■■□□□ 1.49
CMSS1-202ENST00000463526 RSPH4AQ5TD94 716 aa24.36■■□□□ 1.49
CMSS1-202ENST00000463526 CEP170BQ9Y4F5 1589 aaPredicted RBP24.36■■□□□ 1.49
CMSS1-202ENST00000463526 TSPY4P0CV99 314 aa24.34■■□□□ 1.49
CMSS1-202ENST00000463526 TSPY10P0CW01 314 aa24.34■■□□□ 1.49
CMSS1-202ENST00000463526 WASHC2CQ9Y4E1 1318 aa24.34■■□□□ 1.49
CMSS1-202ENST00000463526 PLA2R1Q13018 1463 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms