RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 NISCHQ9Y2I1 1504 aa38.32■■■■□ 3.72
CMSS1-202ENST00000463526 ABCC9O60706 1549 aa34.63■■■■□ 3.13
CMSS1-202ENST00000463526 CCDC180Q9P1Z9 1646 aa34.3■■■■□ 3.08
CMSS1-202ENST00000463526 RB1CC1Q8TDY2 1594 aa32.79■■■□□ 2.84
CMSS1-202ENST00000463526 DCAF8L2P0C7V8 631 aa32.67■■■□□ 2.82
CMSS1-202ENST00000463526 DNAJC5BQ9UF47 199 aa32.62■■■□□ 2.81
CMSS1-202ENST00000463526 NACADO15069 1562 aa32.52■■■□□ 2.8
CMSS1-202ENST00000463526 PABPN1Q86U42 306 aaKnown RBP eCLIP32.32■■■□□ 2.76
CMSS1-202ENST00000463526 MYO15BQ96JP2 1530 aa31.98■■■□□ 2.71
CMSS1-202ENST00000463526 UNC13AQ9UPW8 1703 aa31.97■■■□□ 2.71
CMSS1-202ENST00000463526 BICRAQ9NZM4 1560 aa31.83■■■□□ 2.69
CMSS1-202ENST00000463526 ZCCHC6Q5VYS8 1495 aaKnown RBP31.71■■■□□ 2.67
CMSS1-202ENST00000463526 DCAF1Q9Y4B6 1507 aa31.55■■■□□ 2.64
CMSS1-202ENST00000463526 SCRIBQ14160 1630 aa31.41■■■□□ 2.62
CMSS1-202ENST00000463526 SHROOM4Q9ULL8 1493 aa31.3■■■□□ 2.6
CMSS1-202ENST00000463526 CC2D2AQ9P2K1 1620 aa31.18■■■□□ 2.58
CMSS1-202ENST00000463526 CECR2Q9BXF3 1484 aa31.16■■■□□ 2.58
CMSS1-202ENST00000463526 EIF4G1Q04637 1599 aaKnown RBP31.08■■■□□ 2.57
CMSS1-202ENST00000463526 NCAPD3P42695 1498 aa30.06■■■□□ 2.4
CMSS1-202ENST00000463526 ATAD2BQ9ULI0 1458 aa29.99■■■□□ 2.39
CMSS1-202ENST00000463526 DNAJC5Q9H3Z4 198 aa29.97■■■□□ 2.39
CMSS1-202ENST00000463526 ERCC6Q03468 1493 aa29.89■■■□□ 2.38
CMSS1-202ENST00000463526 SMARCA4P51532 1647 aa29.89■■■□□ 2.37
CMSS1-202ENST00000463526 SMARCA2P51531 1590 aa29.86■■■□□ 2.37
CMSS1-202ENST00000463526 HMGXB3Q12766 1538 aa29.77■■■□□ 2.36
CMSS1-202ENST00000463526 CUX2O14529 1486 aa29.77■■■□□ 2.36
CMSS1-202ENST00000463526 BAZ1AQ9NRL2 1556 aaPredicted RBP29.73■■■□□ 2.35
CMSS1-202ENST00000463526 BAZ1BQ9UIG0 1483 aaKnown RBP29.71■■■□□ 2.35
CMSS1-202ENST00000463526 NESP48681 1621 aa29.71■■■□□ 2.35
CMSS1-202ENST00000463526 MROH2BQ7Z745 1585 aa29.56■■■□□ 2.32
CMSS1-202ENST00000463526 PEG3Q9GZU2 1588 aa29.53■■■□□ 2.32
CMSS1-202ENST00000463526 LAMC3Q9Y6N6 1575 aa29.35■■■□□ 2.29
CMSS1-202ENST00000463526 THOC2Q8NI27 1593 aaKnown RBP29.3■■■□□ 2.28
CMSS1-202ENST00000463526 PDS5BQ9NTI5 1447 aa29.28■■■□□ 2.28
CMSS1-202ENST00000463526 CADPSQ9ULU8 1353 aa29.21■■■□□ 2.27
CMSS1-202ENST00000463526 KIF21AQ7Z4S6 1674 aa29.21■■■□□ 2.27
CMSS1-202ENST00000463526 WIZO95785 1651 aa29.18■■■□□ 2.26
CMSS1-202ENST00000463526 MRC2Q9UBG0 1479 aa29.02■■■□□ 2.24
CMSS1-202ENST00000463526 RSF1Q96T23 1441 aaPredicted RBP28.94■■■□□ 2.22
CMSS1-202ENST00000463526 WDR62O43379 1518 aa28.89■■■□□ 2.22
CMSS1-202ENST00000463526 CEP164Q9UPV0 1460 aa28.89■■■□□ 2.22
CMSS1-202ENST00000463526 FANCD2Q9BXW9 1451 aa28.86■■■□□ 2.21
CMSS1-202ENST00000463526 CFTRP13569 1480 aa28.8■■■□□ 2.2
CMSS1-202ENST00000463526 TOP2AP11388 1531 aaKnown RBP28.78■■■□□ 2.2
CMSS1-202ENST00000463526 TRIM41Q8WV44 630 aa28.75■■■□□ 2.19
CMSS1-202ENST00000463526 URB2Q14146 1524 aaKnown RBP28.62■■■□□ 2.17
CMSS1-202ENST00000463526 OSCARQ8IYS5 282 aa28.53■■■□□ 2.16
CMSS1-202ENST00000463526 CCDC88BA6NC98 1476 aa28.53■■■□□ 2.16
CMSS1-202ENST00000463526 PRDM2Q13029 1718 aa28.35■■■□□ 2.13
CMSS1-202ENST00000463526 ZNF608Q9ULD9 1512 aaPredicted RBP28.32■■■□□ 2.12
CMSS1-202ENST00000463526 IFT140Q96RY7 1462 aa28.31■■■□□ 2.12
CMSS1-202ENST00000463526 TOPBP1Q92547 1522 aa28.29■■■□□ 2.12
CMSS1-202ENST00000463526 ABCC8Q09428 1581 aa28.18■■■□□ 2.1
CMSS1-202ENST00000463526 DNMBPQ6XZF7 1577 aa28.14■■■□□ 2.1
CMSS1-202ENST00000463526 AQRO60306 1485 aaKnown RBP eCLIP28.08■■■□□ 2.09
CMSS1-202ENST00000463526 EIF4G3O43432 1585 aaKnown RBP28.07■■■□□ 2.08
CMSS1-202ENST00000463526 RIMBP3CA6NJZ7 1639 aa28.06■■■□□ 2.08
CMSS1-202ENST00000463526 RIMBP3BA6NNM3 1639 aa28.06■■■□□ 2.08
CMSS1-202ENST00000463526 RIMBP3Q9UFD9 1639 aa28.06■■■□□ 2.08
CMSS1-202ENST00000463526 FBLN2P98095 1184 aa28.03■■■□□ 2.08
CMSS1-202ENST00000463526 POLA1P09884 1462 aaPredicted RBP28■■■□□ 2.07
CMSS1-202ENST00000463526 TARBP1Q13395 1621 aaKnown RBP27.99■■■□□ 2.07
CMSS1-202ENST00000463526 ARHGEF11O15085 1522 aa27.97■■■□□ 2.07
CMSS1-202ENST00000463526 RAD54L2Q9Y4B4 1467 aa27.97■■■□□ 2.07
CMSS1-202ENST00000463526 CYB5RLQ6IPT4 315 aa27.93■■■□□ 2.06
CMSS1-202ENST00000463526 TDRD9Q8NDG6 1382 aaKnown RBP27.93■■■□□ 2.06
CMSS1-202ENST00000463526 SOGA1O94964 1423 aa27.92■■■□□ 2.06
CMSS1-202ENST00000463526 CHD1O14646 1710 aa27.87■■■□□ 2.05
CMSS1-202ENST00000463526 FGD5Q6ZNL6 1462 aa27.83■■■□□ 2.04
CMSS1-202ENST00000463526 SUPT5HO00267 1087 aaKnown RBP27.78■■■□□ 2.04
CMSS1-202ENST00000463526 CUX1P39880 1505 aa27.77■■■□□ 2.04
CMSS1-202ENST00000463526 SNAPC4Q5SXM2 1469 aa27.76■■■□□ 2.03
CMSS1-202ENST00000463526 CHMP7Q8WUX9 453 aaPredicted RBP27.75■■■□□ 2.03
CMSS1-202ENST00000463526 ARAP1Q96P48 1450 aa27.71■■■□□ 2.03
CMSS1-202ENST00000463526 TRHP20396 242 aaPredicted RBP27.68■■■□□ 2.02
CMSS1-202ENST00000463526 GRIN2BQ13224 1484 aa27.64■■■□□ 2.02
CMSS1-202ENST00000463526 WDR97A6NE52 1622 aa27.61■■■□□ 2.01
CMSS1-202ENST00000463526 MAGI1Q96QZ7 1491 aaPredicted RBP27.61■■■□□ 2.01
CMSS1-202ENST00000463526 SYNJ2O15056 1496 aa27.55■■■□□ 2
CMSS1-202ENST00000463526 GAPVD1Q14C86 1478 aa27.55■■■□□ 2
CMSS1-202ENST00000463526 CLASP1Q7Z460 1538 aa27.55■■■□□ 2
CMSS1-202ENST00000463526 SYNJ1O43426 1573 aa27.55■■■□□ 2
CMSS1-202ENST00000463526 ABCA10Q8WWZ4 1543 aa27.46■■□□□ 1.99
CMSS1-202ENST00000463526 PBRM1Q86U86 1689 aa27.44■■□□□ 1.98
CMSS1-202ENST00000463526 WRNQ14191 1432 aaPredicted RBP eCLIP27.39■■□□□ 1.97
CMSS1-202ENST00000463526 ABCA5Q8WWZ7 1642 aa27.38■■□□□ 1.97
CMSS1-202ENST00000463526 GRIN2AQ12879 1464 aa27.27■■□□□ 1.96
CMSS1-202ENST00000463526 TOP2BQ02880 1626 aa27.24■■□□□ 1.95
CMSS1-202ENST00000463526 BIVM-ERCC5R4GMW8 1640 aa27.21■■□□□ 1.95
CMSS1-202ENST00000463526 ADAMTS12P58397 1594 aa27.21■■□□□ 1.95
CMSS1-202ENST00000463526 ERCC6L2Q5T890 1561 aa27.19■■□□□ 1.94
CMSS1-202ENST00000463526 FHAD1B1AJZ9 1412 aa27.19■■□□□ 1.94
CMSS1-202ENST00000463526 NUP160Q12769 1436 aa27.17■■□□□ 1.94
CMSS1-202ENST00000463526 CEP170Q5SW79 1584 aa27.17■■□□□ 1.94
CMSS1-202ENST00000463526 ERICH3Q5RHP9 1530 aa27.09■■□□□ 1.93
CMSS1-202ENST00000463526 JPH4Q96JJ6 628 aa27.01■■□□□ 1.91
CMSS1-202ENST00000463526 PRG4Q92954 1404 aaPredicted RBP27■■□□□ 1.91
CMSS1-202ENST00000463526 SHROOM2Q13796 1616 aa26.99■■□□□ 1.91
CMSS1-202ENST00000463526 AEBP2Q6ZN18 517 aaPredicted RBP26.93■■□□□ 1.9
CMSS1-202ENST00000463526 IGF1RP08069 1367 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms