RNA–Protein interactions for RNA: ENST00000463078.1

ARPC1B-214, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 3

Gene ARPC1B, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-214ENST00000463078 SCAPERQ9BY12 1400 aa24.7■■□□□ 1.55
ARPC1B-214ENST00000463078 ZFYVE16Q7Z3T8 1539 aa24.69■■□□□ 1.54
ARPC1B-214ENST00000463078 MAGI2Q86UL8 1455 aa24.69■■□□□ 1.54
ARPC1B-214ENST00000463078 EFCAB2Q5VUJ9 269 aa24.68■■□□□ 1.54
ARPC1B-214ENST00000463078 CDC42BPBQ9Y5S2 1711 aa24.67■■□□□ 1.54
ARPC1B-214ENST00000463078 YEATS2Q9ULM3 1422 aa24.67■■□□□ 1.54
ARPC1B-214ENST00000463078 HECW2Q9P2P5 1572 aa24.66■■□□□ 1.54
ARPC1B-214ENST00000463078 SIGLEC1Q9BZZ2 1709 aa24.66■■□□□ 1.54
ARPC1B-214ENST00000463078 ARHGAP5Q13017 1502 aa24.66■■□□□ 1.54
ARPC1B-214ENST00000463078 PREX2Q70Z35 1606 aa24.64■■□□□ 1.54
ARPC1B-214ENST00000463078 MADDQ8WXG6 1647 aa24.63■■□□□ 1.53
ARPC1B-214ENST00000463078 PTPRMP28827 1452 aa24.63■■□□□ 1.53
ARPC1B-214ENST00000463078 CDC42BPAQ5VT25 1732 aa24.6■■□□□ 1.53
ARPC1B-214ENST00000463078 ARID4BQ4LE39 1312 aaPredicted RBP24.6■■□□□ 1.53
ARPC1B-214ENST00000463078 KDM5CP41229 1560 aa24.59■■□□□ 1.53
ARPC1B-214ENST00000463078 ZNF518AQ6AHZ1 1483 aa24.58■■□□□ 1.53
ARPC1B-214ENST00000463078 ABCC1P33527 1531 aa24.56■■□□□ 1.52
ARPC1B-214ENST00000463078 CEP162Q5TB80 1403 aa24.54■■□□□ 1.52
ARPC1B-214ENST00000463078 RIMS1Q86UR5 1692 aaKnown RBP24.54■■□□□ 1.52
ARPC1B-214ENST00000463078 ATP10AO60312 1499 aa24.53■■□□□ 1.52
ARPC1B-214ENST00000463078 ARHGEF12Q9NZN5 1544 aa24.53■■□□□ 1.52
ARPC1B-214ENST00000463078 ITSN2Q9NZM3 1697 aa24.53■■□□□ 1.52
ARPC1B-214ENST00000463078 C9orf84Q5VXU9 1444 aa24.52■■□□□ 1.52
ARPC1B-214ENST00000463078 AFAP1Q8N556 730 aa24.51■■□□□ 1.51
ARPC1B-214ENST00000463078 GPATCH8Q9UKJ3 1502 aaKnown RBP24.48■■□□□ 1.51
ARPC1B-214ENST00000463078 DIP2CQ9Y2E4 1556 aa24.48■■□□□ 1.51
ARPC1B-214ENST00000463078 TRAPPC8Q9Y2L5 1435 aa24.48■■□□□ 1.51
ARPC1B-214ENST00000463078 MLH3Q9UHC1 1453 aa24.47■■□□□ 1.51
ARPC1B-214ENST00000463078 SAMD9LQ8IVG5 1584 aa24.46■■□□□ 1.51
ARPC1B-214ENST00000463078 ABCA6Q8N139 1617 aa24.46■■□□□ 1.51
ARPC1B-214ENST00000463078 REREQ9P2R6 1566 aa24.46■■□□□ 1.51
ARPC1B-214ENST00000463078 FER1L4A9Z1Z3 1794 aa24.45■■□□□ 1.5
ARPC1B-214ENST00000463078 MTUS2Q5JR59 1369 aa24.42■■□□□ 1.5
ARPC1B-214ENST00000463078 EHBP1L1Q8N3D4 1523 aa24.41■■□□□ 1.5
ARPC1B-214ENST00000463078 KIDINS220Q9ULH0 1771 aa24.41■■□□□ 1.5
ARPC1B-214ENST00000463078 SYCP2Q9BX26 1530 aa24.4■■□□□ 1.5
ARPC1B-214ENST00000463078 MLECQ14165 292 aa24.39■■□□□ 1.49
ARPC1B-214ENST00000463078 LMTK3Q96Q04 1460 aa24.38■■□□□ 1.49
ARPC1B-214ENST00000463078 TIAM1Q13009 1591 aa24.37■■□□□ 1.49
ARPC1B-214ENST00000463078 CCNB3Q8WWL7 1395 aa24.37■■□□□ 1.49
ARPC1B-214ENST00000463078 KIAA1107Q9UPP5 1409 aa24.35■■□□□ 1.49
ARPC1B-214ENST00000463078 AGLP35573 1532 aa24.35■■□□□ 1.49
ARPC1B-214ENST00000463078 LOC105371045A0A1W2PR82 267 aa24.35■■□□□ 1.49
ARPC1B-214ENST00000463078 ZNF777Q9ULD5 760 aaPredicted RBP24.35■■□□□ 1.49
ARPC1B-214ENST00000463078 MYT1LQ9UL68 1186 aa24.34■■□□□ 1.49
ARPC1B-214ENST00000463078 PLEKHH2Q8IVE3 1493 aa24.33■■□□□ 1.49
ARPC1B-214ENST00000463078 CFDP1Q9UEE9 299 aaPredicted RBP24.33■■□□□ 1.49
ARPC1B-214ENST00000463078 INO80Q9ULG1 1556 aaPredicted RBP24.29■■□□□ 1.48
ARPC1B-214ENST00000463078 VPS8Q8N3P4 1428 aa24.29■■□□□ 1.48
ARPC1B-214ENST00000463078 HNRNPMP52272 730 aaKnown RBP eCLIP24.29■■□□□ 1.48
ARPC1B-214ENST00000463078 ATP7AQ04656 1500 aa24.27■■□□□ 1.48
ARPC1B-214ENST00000463078 SUPT6HQ7KZ85 1726 aaKnown RBP24.27■■□□□ 1.48
ARPC1B-214ENST00000463078 PLPPR3Q6T4P5 718 aa24.26■■□□□ 1.47
ARPC1B-214ENST00000463078 SPAG9O60271 1321 aaKnown RBP24.26■■□□□ 1.47
ARPC1B-214ENST00000463078 NCOA2Q15596 1464 aa24.25■■□□□ 1.47
ARPC1B-214ENST00000463078 MBD5Q9P267 1494 aa24.24■■□□□ 1.47
ARPC1B-214ENST00000463078 ZNF644Q9H582 1327 aaPredicted RBP24.23■■□□□ 1.47
ARPC1B-214ENST00000463078 PREX1Q8TCU6 1659 aa24.22■■□□□ 1.47
ARPC1B-214ENST00000463078 PLXNC1O60486 1568 aa24.22■■□□□ 1.47
ARPC1B-214ENST00000463078 C3P01024 1663 aa24.21■■□□□ 1.47
ARPC1B-214ENST00000463078 CEBPAP49715 358 aaPredicted RBP24.2■■□□□ 1.46
ARPC1B-214ENST00000463078 LRRC9Q6ZRR7 1453 aa24.19■■□□□ 1.46
ARPC1B-214ENST00000463078 HSPA2P54652 639 aa24.18■■□□□ 1.46
ARPC1B-214ENST00000463078 MAP3K1Q13233 1512 aa24.18■■□□□ 1.46
ARPC1B-214ENST00000463078 A2MP01023 1474 aa24.17■■□□□ 1.46
ARPC1B-214ENST00000463078 ADGBQ8N7X0 1667 aa24.16■■□□□ 1.46
ARPC1B-214ENST00000463078 CAMSAP2Q08AD1 1489 aa24.15■■□□□ 1.46
ARPC1B-214ENST00000463078 SETD1BQ9UPS6 1966 aaKnown RBP24.15■■□□□ 1.46
ARPC1B-214ENST00000463078 ILDR1Q86SU0 546 aaPredicted RBP24.15■■□□□ 1.46
ARPC1B-214ENST00000463078 CNTLNQ9NXG0 1405 aa24.14■■□□□ 1.45
ARPC1B-214ENST00000463078 MROH2AA6NES4 1674 aa24.14■■□□□ 1.45
ARPC1B-214ENST00000463078 RTEL1-TNFRSF6BF6WH68 1400 aa24.13■■□□□ 1.45
ARPC1B-214ENST00000463078 CCDC141Q6ZP82 1450 aa24.11■■□□□ 1.45
ARPC1B-214ENST00000463078 ARHGEF5Q12774 1597 aa24.08■■□□□ 1.45
ARPC1B-214ENST00000463078 ESF1Q9H501 851 aaKnown RBP24.08■■□□□ 1.45
ARPC1B-214ENST00000463078 UHRF1BP1Q6BDS2 1440 aa24.08■■□□□ 1.44
ARPC1B-214ENST00000463078 KANK4Q5T7N3 995 aaPredicted RBP24.07■■□□□ 1.44
ARPC1B-214ENST00000463078 CLTCQ00610 1675 aaKnown RBP24.06■■□□□ 1.44
ARPC1B-214ENST00000463078 RSPH4AQ5TD94 716 aa24.04■■□□□ 1.44
ARPC1B-214ENST00000463078 STRCQ7RTU9 1775 aa24.03■■□□□ 1.44
ARPC1B-214ENST00000463078 DHX29Q7Z478 1369 aaKnown RBP24.03■■□□□ 1.44
ARPC1B-214ENST00000463078 ZMYM3Q14202 1370 aa24.02■■□□□ 1.44
ARPC1B-214ENST00000463078 NPATQ14207 1427 aa24.01■■□□□ 1.43
ARPC1B-214ENST00000463078 MYOM3Q5VTT5 1437 aa24■■□□□ 1.43
ARPC1B-214ENST00000463078 MIA2Q96PC5 1412 aa23.99■■□□□ 1.43
ARPC1B-214ENST00000463078 GGT6Q6P531 493 aa23.98■■□□□ 1.43
ARPC1B-214ENST00000463078 PPP6R1Q9UPN7 881 aa23.98■■□□□ 1.43
ARPC1B-214ENST00000463078 MAST1Q9Y2H9 1570 aa23.98■■□□□ 1.43
ARPC1B-214ENST00000463078 PTPRKQ15262 1439 aa23.94■■□□□ 1.42
ARPC1B-214ENST00000463078 TSPY4P0CV99 314 aa23.92■■□□□ 1.42
ARPC1B-214ENST00000463078 TSPY10P0CW01 314 aa23.92■■□□□ 1.42
ARPC1B-214ENST00000463078 FAM135AQ9P2D6 1515 aa23.92■■□□□ 1.42
ARPC1B-214ENST00000463078 ZNF142P52746 1687 aaPredicted RBP23.92■■□□□ 1.42
ARPC1B-214ENST00000463078 MYO3AQ8NEV4 1616 aa23.92■■□□□ 1.42
ARPC1B-214ENST00000463078 FBXO41Q8TF61 875 aa23.91■■□□□ 1.42
ARPC1B-214ENST00000463078 KIF3BO15066 747 aa23.89■■□□□ 1.41
ARPC1B-214ENST00000463078 NCOA1Q15788 1441 aa23.88■■□□□ 1.41
ARPC1B-214ENST00000463078 KDM5DQ9BY66 1539 aa23.88■■□□□ 1.41
ARPC1B-214ENST00000463078 DMRT2Q9Y5R5 561 aa23.87■■□□□ 1.41
ARPC1B-214ENST00000463078 PTPRTO14522 1441 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms