RNA–Protein interactions for RNA: ENST00000463078.1

ARPC1B-214, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 3

Gene ARPC1B, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-214ENST00000463078 NISCHQ9Y2I1 1504 aa37.87■■■■□ 3.65
ARPC1B-214ENST00000463078 CCDC180Q9P1Z9 1646 aa33.92■■■■□ 3.02
ARPC1B-214ENST00000463078 ABCC9O60706 1549 aa33.56■■■□□ 2.96
ARPC1B-214ENST00000463078 RB1CC1Q8TDY2 1594 aa32.11■■■□□ 2.73
ARPC1B-214ENST00000463078 NACADO15069 1562 aa31.97■■■□□ 2.71
ARPC1B-214ENST00000463078 DCAF8L2P0C7V8 631 aa31.68■■■□□ 2.66
ARPC1B-214ENST00000463078 MYO15BQ96JP2 1530 aa31.66■■■□□ 2.66
ARPC1B-214ENST00000463078 ZCCHC6Q5VYS8 1495 aaKnown RBP31.47■■■□□ 2.63
ARPC1B-214ENST00000463078 UNC13AQ9UPW8 1703 aa31.44■■■□□ 2.62
ARPC1B-214ENST00000463078 DCAF1Q9Y4B6 1507 aa31.34■■■□□ 2.61
ARPC1B-214ENST00000463078 PABPN1Q86U42 306 aaKnown RBP eCLIP31.25■■■□□ 2.59
ARPC1B-214ENST00000463078 DNAJC5BQ9UF47 199 aa31.25■■■□□ 2.59
ARPC1B-214ENST00000463078 BICRAQ9NZM4 1560 aa31.21■■■□□ 2.59
ARPC1B-214ENST00000463078 SCRIBQ14160 1630 aa30.86■■■□□ 2.53
ARPC1B-214ENST00000463078 SHROOM4Q9ULL8 1493 aa30.82■■■□□ 2.52
ARPC1B-214ENST00000463078 EIF4G1Q04637 1599 aaKnown RBP30.39■■■□□ 2.46
ARPC1B-214ENST00000463078 CC2D2AQ9P2K1 1620 aa30.38■■■□□ 2.45
ARPC1B-214ENST00000463078 CECR2Q9BXF3 1484 aa30.21■■■□□ 2.43
ARPC1B-214ENST00000463078 NCAPD3P42695 1498 aa29.5■■■□□ 2.31
ARPC1B-214ENST00000463078 SMARCA4P51532 1647 aa29.5■■■□□ 2.31
ARPC1B-214ENST00000463078 ATAD2BQ9ULI0 1458 aa29.45■■■□□ 2.31
ARPC1B-214ENST00000463078 BAZ1AQ9NRL2 1556 aaPredicted RBP29.38■■■□□ 2.29
ARPC1B-214ENST00000463078 SMARCA2P51531 1590 aa29.37■■■□□ 2.29
ARPC1B-214ENST00000463078 HMGXB3Q12766 1538 aa29.33■■■□□ 2.29
ARPC1B-214ENST00000463078 PEG3Q9GZU2 1588 aa29.26■■■□□ 2.27
ARPC1B-214ENST00000463078 MROH2BQ7Z745 1585 aa29.18■■■□□ 2.26
ARPC1B-214ENST00000463078 BAZ1BQ9UIG0 1483 aaKnown RBP29.15■■■□□ 2.26
ARPC1B-214ENST00000463078 NESP48681 1621 aa28.93■■■□□ 2.22
ARPC1B-214ENST00000463078 ERCC6Q03468 1493 aa28.92■■■□□ 2.22
ARPC1B-214ENST00000463078 WIZO95785 1651 aa28.85■■■□□ 2.21
ARPC1B-214ENST00000463078 CUX2O14529 1486 aa28.85■■■□□ 2.21
ARPC1B-214ENST00000463078 LAMC3Q9Y6N6 1575 aa28.79■■■□□ 2.2
ARPC1B-214ENST00000463078 RSF1Q96T23 1441 aaPredicted RBP28.67■■■□□ 2.18
ARPC1B-214ENST00000463078 THOC2Q8NI27 1593 aaKnown RBP28.64■■■□□ 2.18
ARPC1B-214ENST00000463078 KIF21AQ7Z4S6 1674 aa28.61■■■□□ 2.17
ARPC1B-214ENST00000463078 CADPSQ9ULU8 1353 aa28.59■■■□□ 2.17
ARPC1B-214ENST00000463078 PDS5BQ9NTI5 1447 aa28.57■■■□□ 2.16
ARPC1B-214ENST00000463078 TOP2AP11388 1531 aaKnown RBP28.52■■■□□ 2.16
ARPC1B-214ENST00000463078 DNAJC5Q9H3Z4 198 aa28.48■■■□□ 2.15
ARPC1B-214ENST00000463078 CFTRP13569 1480 aa28.34■■■□□ 2.13
ARPC1B-214ENST00000463078 MRC2Q9UBG0 1479 aa28.34■■■□□ 2.13
ARPC1B-214ENST00000463078 WDR62O43379 1518 aa28.29■■■□□ 2.12
ARPC1B-214ENST00000463078 FANCD2Q9BXW9 1451 aa28.27■■■□□ 2.12
ARPC1B-214ENST00000463078 CEP164Q9UPV0 1460 aa28.27■■■□□ 2.12
ARPC1B-214ENST00000463078 CCDC88BA6NC98 1476 aa28.16■■■□□ 2.1
ARPC1B-214ENST00000463078 PRDM2Q13029 1718 aa28.14■■■□□ 2.1
ARPC1B-214ENST00000463078 URB2Q14146 1524 aaKnown RBP28.04■■■□□ 2.08
ARPC1B-214ENST00000463078 TOPBP1Q92547 1522 aa27.78■■■□□ 2.04
ARPC1B-214ENST00000463078 ABCC8Q09428 1581 aa27.72■■■□□ 2.03
ARPC1B-214ENST00000463078 DNMBPQ6XZF7 1577 aa27.71■■■□□ 2.03
ARPC1B-214ENST00000463078 IFT140Q96RY7 1462 aa27.7■■■□□ 2.03
ARPC1B-214ENST00000463078 ZNF608Q9ULD9 1512 aaPredicted RBP27.64■■■□□ 2.02
ARPC1B-214ENST00000463078 TARBP1Q13395 1621 aaKnown RBP27.55■■■□□ 2
ARPC1B-214ENST00000463078 EIF4G3O43432 1585 aaKnown RBP27.52■■■□□ 2
ARPC1B-214ENST00000463078 POLA1P09884 1462 aaPredicted RBP27.51■■■□□ 2
ARPC1B-214ENST00000463078 OSCARQ8IYS5 282 aa27.5■■□□□ 1.99
ARPC1B-214ENST00000463078 SUPT5HO00267 1087 aaKnown RBP27.48■■□□□ 1.99
ARPC1B-214ENST00000463078 CUX1P39880 1505 aa27.41■■□□□ 1.98
ARPC1B-214ENST00000463078 AQRO60306 1485 aaKnown RBP eCLIP27.39■■□□□ 1.98
ARPC1B-214ENST00000463078 RAD54L2Q9Y4B4 1467 aa27.38■■□□□ 1.97
ARPC1B-214ENST00000463078 FGD5Q6ZNL6 1462 aa27.38■■□□□ 1.97
ARPC1B-214ENST00000463078 SOGA1O94964 1423 aa27.35■■□□□ 1.97
ARPC1B-214ENST00000463078 WDR97A6NE52 1622 aa27.29■■□□□ 1.96
ARPC1B-214ENST00000463078 CHD1O14646 1710 aa27.27■■□□□ 1.96
ARPC1B-214ENST00000463078 TRIM41Q8WV44 630 aa27.27■■□□□ 1.96
ARPC1B-214ENST00000463078 TDRD9Q8NDG6 1382 aaKnown RBP27.25■■□□□ 1.95
ARPC1B-214ENST00000463078 RIMBP3CA6NJZ7 1639 aa27.19■■□□□ 1.94
ARPC1B-214ENST00000463078 RIMBP3BA6NNM3 1639 aa27.19■■□□□ 1.94
ARPC1B-214ENST00000463078 RIMBP3Q9UFD9 1639 aa27.19■■□□□ 1.94
ARPC1B-214ENST00000463078 SNAPC4Q5SXM2 1469 aa27.14■■□□□ 1.94
ARPC1B-214ENST00000463078 ARHGEF11O15085 1522 aa27.13■■□□□ 1.93
ARPC1B-214ENST00000463078 GRIN2BQ13224 1484 aa27.11■■□□□ 1.93
ARPC1B-214ENST00000463078 MAGI1Q96QZ7 1491 aaPredicted RBP27.1■■□□□ 1.93
ARPC1B-214ENST00000463078 ABCA10Q8WWZ4 1543 aa27.1■■□□□ 1.93
ARPC1B-214ENST00000463078 BIVM-ERCC5R4GMW8 1640 aa27.08■■□□□ 1.93
ARPC1B-214ENST00000463078 FBLN2P98095 1184 aa27.07■■□□□ 1.92
ARPC1B-214ENST00000463078 ABCA5Q8WWZ7 1642 aa27.06■■□□□ 1.92
ARPC1B-214ENST00000463078 PBRM1Q86U86 1689 aa27.06■■□□□ 1.92
ARPC1B-214ENST00000463078 TOP2BQ02880 1626 aa27.05■■□□□ 1.92
ARPC1B-214ENST00000463078 GAPVD1Q14C86 1478 aa27.04■■□□□ 1.92
ARPC1B-214ENST00000463078 SYNJ1O43426 1573 aa27.03■■□□□ 1.92
ARPC1B-214ENST00000463078 WRNQ14191 1432 aaPredicted RBP eCLIP27.02■■□□□ 1.92
ARPC1B-214ENST00000463078 SYNJ2O15056 1496 aa27■■□□□ 1.91
ARPC1B-214ENST00000463078 CLASP1Q7Z460 1538 aa26.98■■□□□ 1.91
ARPC1B-214ENST00000463078 CHMP7Q8WUX9 453 aaPredicted RBP26.95■■□□□ 1.9
ARPC1B-214ENST00000463078 ARAP1Q96P48 1450 aa26.89■■□□□ 1.9
ARPC1B-214ENST00000463078 CYB5RLQ6IPT4 315 aa26.82■■□□□ 1.88
ARPC1B-214ENST00000463078 ADAMTS12P58397 1594 aa26.82■■□□□ 1.88
ARPC1B-214ENST00000463078 GRIN2AQ12879 1464 aa26.77■■□□□ 1.88
ARPC1B-214ENST00000463078 ERICH3Q5RHP9 1530 aa26.76■■□□□ 1.87
ARPC1B-214ENST00000463078 FHAD1B1AJZ9 1412 aa26.72■■□□□ 1.87
ARPC1B-214ENST00000463078 AEBP2Q6ZN18 517 aaPredicted RBP26.71■■□□□ 1.87
ARPC1B-214ENST00000463078 NUP160Q12769 1436 aa26.69■■□□□ 1.86
ARPC1B-214ENST00000463078 CEP170Q5SW79 1584 aa26.68■■□□□ 1.86
ARPC1B-214ENST00000463078 CHIC1Q5VXU3 224 aa26.66■■□□□ 1.86
ARPC1B-214ENST00000463078 SHROOM2Q13796 1616 aa26.57■■□□□ 1.84
ARPC1B-214ENST00000463078 ERCC6L2Q5T890 1561 aa26.56■■□□□ 1.84
ARPC1B-214ENST00000463078 KIF27Q86VH2 1401 aa26.48■■□□□ 1.83
ARPC1B-214ENST00000463078 IGF1RP08069 1367 aa26.45■■□□□ 1.82
ARPC1B-214ENST00000463078 RUSC2Q8N2Y8 1516 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms