RNA–Protein interactions for RNA: ENST00000462904.1

SP3-204, Transcript of Sp3 transcription factor, humanhuman

TSL 4

Gene SP3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-204ENST00000462904 SIGLEC1Q9BZZ2 1709 aa18.12■□□□□ 0.49
SP3-204ENST00000462904 CFAP74Q9C0B2 1584 aa18.11■□□□□ 0.49
SP3-204ENST00000462904 MAGI2Q86UL8 1455 aa18.1■□□□□ 0.49
SP3-204ENST00000462904 RAPGEF6Q8TEU7 1601 aa18.09■□□□□ 0.49
SP3-204ENST00000462904 UHRF1BP1Q6BDS2 1440 aa18.09■□□□□ 0.49
SP3-204ENST00000462904 CEBPAP49715 358 aaPredicted RBP18.09■□□□□ 0.49
SP3-204ENST00000462904 STRCQ7RTU9 1775 aa18.09■□□□□ 0.49
SP3-204ENST00000462904 ARHGEF12Q9NZN5 1544 aa18.07■□□□□ 0.48
SP3-204ENST00000462904 PLEKHD1A6NEE1 506 aa18.06■□□□□ 0.48
SP3-204ENST00000462904 PRXQ9BXM0 1461 aa18.05■□□□□ 0.48
SP3-204ENST00000462904 PTPRTO14522 1441 aa18.05■□□□□ 0.48
SP3-204ENST00000462904 NUP153P49790 1475 aaKnown RBP18.04■□□□□ 0.48
SP3-204ENST00000462904 HECW1Q76N89 1606 aa18.04■□□□□ 0.48
SP3-204ENST00000462904 IQSEC2Q5JU85 1478 aa18.02■□□□□ 0.48
SP3-204ENST00000462904 C9orf84Q5VXU9 1444 aa18.02■□□□□ 0.48
SP3-204ENST00000462904 ATP10AO60312 1499 aa18.01■□□□□ 0.47
SP3-204ENST00000462904 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.01■□□□□ 0.471e-6■■■■□ 21.8
SP3-204ENST00000462904 SAMD9Q5K651 1589 aa18■□□□□ 0.47
SP3-204ENST00000462904 SCAPERQ9BY12 1400 aa17.99■□□□□ 0.47
SP3-204ENST00000462904 LTBP4Q8N2S1 1624 aa17.99■□□□□ 0.47
SP3-204ENST00000462904 UBAP1LF5GYI3 381 aa17.94■□□□□ 0.46
SP3-204ENST00000462904 SETD1BQ9UPS6 1966 aaKnown RBP17.93■□□□□ 0.46
SP3-204ENST00000462904 MSH5O43196 834 aa17.93■□□□□ 0.46
SP3-204ENST00000462904 RANGAP1P46060 587 aaPredicted RBP17.91■□□□□ 0.46
SP3-204ENST00000462904 PLCH2O75038 1416 aa17.9■□□□□ 0.46
SP3-204ENST00000462904 ESF1Q9H501 851 aaKnown RBP17.9■□□□□ 0.46
SP3-204ENST00000462904 NCOA1Q15788 1441 aa17.89■□□□□ 0.46
SP3-204ENST00000462904 MYT1LQ9UL68 1186 aa17.89■□□□□ 0.45
SP3-204ENST00000462904 TRAPPC8Q9Y2L5 1435 aa17.87■□□□□ 0.45
SP3-204ENST00000462904 EFCAB2Q5VUJ9 269 aa17.86■□□□□ 0.45
SP3-204ENST00000462904 ZNF518AQ6AHZ1 1483 aa17.85■□□□□ 0.45
SP3-204ENST00000462904 C3P01024 1663 aa17.84■□□□□ 0.45
SP3-204ENST00000462904 ZNF335Q9H4Z2 1342 aaPredicted RBP17.84■□□□□ 0.45
SP3-204ENST00000462904 MED1Q15648 1581 aaPredicted RBP17.82■□□□□ 0.44
SP3-204ENST00000462904 AFAP1Q8N556 730 aa17.81■□□□□ 0.44
SP3-204ENST00000462904 CAMSAP1Q5T5Y3 1602 aa17.8■□□□□ 0.44
SP3-204ENST00000462904 SCAF1Q9H7N4 1312 aaKnown RBP17.8■□□□□ 0.44
SP3-204ENST00000462904 CDK13Q14004 1512 aaKnown RBP17.8■□□□□ 0.44
SP3-204ENST00000462904 DIP2CQ9Y2E4 1556 aa17.79■□□□□ 0.44
SP3-204ENST00000462904 NCKAP5LQ9HCH0 1330 aa17.79■□□□□ 0.44
SP3-204ENST00000462904 KDM5CP41229 1560 aa17.79■□□□□ 0.44
SP3-204ENST00000462904 REREQ9P2R6 1566 aa17.78■□□□□ 0.44
SP3-204ENST00000462904 HSPA1LP34931 641 aa17.77■□□□□ 0.44
SP3-204ENST00000462904 CNTLNQ9NXG0 1405 aa17.77■□□□□ 0.44
SP3-204ENST00000462904 MYO5CQ9NQX4 1742 aa17.76■□□□□ 0.43
SP3-204ENST00000462904 CSRNP3Q8WYN3 585 aa17.75■□□□□ 0.43
SP3-204ENST00000462904 AGLP35573 1532 aa17.75■□□□□ 0.43
SP3-204ENST00000462904 ARHGAP5Q13017 1502 aa17.74■□□□□ 0.43
SP3-204ENST00000462904 PIP4K2BP78356 416 aa17.74■□□□□ 0.43
SP3-204ENST00000462904 ABCA6Q8N139 1617 aa17.73■□□□□ 0.43
SP3-204ENST00000462904 NPATQ14207 1427 aa17.72■□□□□ 0.43
SP3-204ENST00000462904 PKD2Q13563 968 aa17.72■□□□□ 0.43
SP3-204ENST00000462904 MLH3Q9UHC1 1453 aa17.71■□□□□ 0.43
SP3-204ENST00000462904 ATP1B4Q9UN42 357 aaPredicted RBP17.71■□□□□ 0.43
SP3-204ENST00000462904 CDK11AQ9UQ88 783 aaPredicted RBP17.7■□□□□ 0.42
SP3-204ENST00000462904 TOM1O60784 492 aa17.69■□□□□ 0.42
SP3-204ENST00000462904 PLA2R1Q13018 1463 aa17.69■□□□□ 0.42
SP3-204ENST00000462904 KIF14Q15058 1648 aa17.68■□□□□ 0.42
SP3-204ENST00000462904 ZMYM3Q14202 1370 aa17.66■□□□□ 0.42
SP3-204ENST00000462904 TCOF1Q13428 1488 aaKnown RBP17.65■□□□□ 0.42
SP3-204ENST00000462904 CLIP1P30622 1438 aa17.64■□□□□ 0.41
SP3-204ENST00000462904 MROH2AA6NES4 1674 aa17.63■□□□□ 0.41
SP3-204ENST00000462904 TROQ12816 1431 aaPredicted RBP17.63■□□□□ 0.41
SP3-204ENST00000462904 CEP170BQ9Y4F5 1589 aaPredicted RBP17.62■□□□□ 0.41
SP3-204ENST00000462904 MYO3AQ8NEV4 1616 aa17.61■□□□□ 0.41
SP3-204ENST00000462904 ZNF142P52746 1687 aaPredicted RBP17.61■□□□□ 0.41
SP3-204ENST00000462904 ABCC1P33527 1531 aa17.6■□□□□ 0.41
SP3-204ENST00000462904 SUPT6HQ7KZ85 1726 aaKnown RBP17.6■□□□□ 0.41
SP3-204ENST00000462904 CPS1P31327 1500 aa17.59■□□□□ 0.41
SP3-204ENST00000462904 FMN1Q68DA7 1419 aa17.58■□□□□ 0.41
SP3-204ENST00000462904 KIDINS220Q9ULH0 1771 aa17.57■□□□□ 0.4
SP3-204ENST00000462904 PTPRKQ15262 1439 aa17.55■□□□□ 0.4
SP3-204ENST00000462904 ITSN2Q9NZM3 1697 aa17.55■□□□□ 0.4
SP3-204ENST00000462904 CDC42BPBQ9Y5S2 1711 aa17.55■□□□□ 0.4
SP3-204ENST00000462904 SHANK2Q9UPX8 1470 aa17.54■□□□□ 0.4
SP3-204ENST00000462904 CLTCQ00610 1675 aaKnown RBP17.54■□□□□ 0.4
SP3-204ENST00000462904 EEA1Q15075 1411 aa17.54■□□□□ 0.4
SP3-204ENST00000462904 PREX2Q70Z35 1606 aa17.52■□□□□ 0.4
SP3-204ENST00000462904 A2ML1A8K2U0 1454 aa17.5■□□□□ 0.39
SP3-204ENST00000462904 GGT6Q6P531 493 aa17.5■□□□□ 0.39
SP3-204ENST00000462904 SPAG9O60271 1321 aaKnown RBP17.49■□□□□ 0.39
SP3-204ENST00000462904 SAMD9LQ8IVG5 1584 aa17.49■□□□□ 0.39
SP3-204ENST00000462904 DNMT1P26358 1616 aaKnown RBP17.47■□□□□ 0.39
SP3-204ENST00000462904 ZNF777Q9ULD5 760 aaPredicted RBP17.47■□□□□ 0.39
SP3-204ENST00000462904 NEURL4Q96JN8 1562 aa17.45■□□□□ 0.38
SP3-204ENST00000462904 A2MP01023 1474 aa17.44■□□□□ 0.38
SP3-204ENST00000462904 POLR1AO95602 1720 aaPredicted RBP17.44■□□□□ 0.38
SP3-204ENST00000462904 ALKQ9UM73 1620 aa17.44■□□□□ 0.38
SP3-204ENST00000462904 RGS17Q9UGC6 210 aaPredicted RBP17.44■□□□□ 0.38
SP3-204ENST00000462904 PLXNC1O60486 1568 aa17.44■□□□□ 0.38
SP3-204ENST00000462904 ARHGAP35Q9NRY4 1499 aa17.44■□□□□ 0.38
SP3-204ENST00000462904 SYCP2Q9BX26 1530 aa17.43■□□□□ 0.38
SP3-204ENST00000462904 ATP7AQ04656 1500 aa17.42■□□□□ 0.38
SP3-204ENST00000462904 VWDEQ8N2E2 1590 aa17.42■□□□□ 0.38
SP3-204ENST00000462904 ANKLE2Q86XL3 938 aa17.42■□□□□ 0.38
SP3-204ENST00000462904 UBTFP17480 764 aaKnown RBP17.41■□□□□ 0.38
SP3-204ENST00000462904 HNRNPMP52272 730 aaKnown RBP eCLIP17.41■□□□□ 0.38
SP3-204ENST00000462904 EHMT2Q96KQ7 1210 aa17.41■□□□□ 0.38
SP3-204ENST00000462904 TNRQ92752 1358 aa17.4■□□□□ 0.38
SP3-204ENST00000462904 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms