RNA–Protein interactions for RNA: ENST00000461739.1

ARHGAP4-215, Transcript of Rho GTPase activating protein 4, human

TSL 3

Gene ARHGAP4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP4-215	ENST00000461739	ARHGAP5	Q13017	1502 aa		32.8	■■■□□ 2.84
ARHGAP4-215	ENST00000461739	APLP2	Q06481	763 aa		32.79	■■■□□ 2.84
ARHGAP4-215	ENST00000461739	EFCAB2	Q5VUJ9	269 aa		32.78	■■■□□ 2.84
ARHGAP4-215	ENST00000461739	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.75	■■■□□ 2.83
ARHGAP4-215	ENST00000461739	CCNB3	Q8WWL7	1395 aa		32.73	■■■□□ 2.83
ARHGAP4-215	ENST00000461739	ITSN2	Q9NZM3	1697 aa		32.72	■■■□□ 2.83
ARHGAP4-215	ENST00000461739	NCOA2	Q15596	1464 aa		32.72	■■■□□ 2.83
ARHGAP4-215	ENST00000461739	KANK4	Q5T7N3	995 aa	Predicted RBP	32.71	■■■□□ 2.83
ARHGAP4-215	ENST00000461739	ADGRL1	O94910	1474 aa		32.71	■■■□□ 2.83
ARHGAP4-215	ENST00000461739	RICTOR	Q6R327	1708 aa		32.68	■■■□□ 2.82
ARHGAP4-215	ENST00000461739	DENND4B	O75064	1496 aa	Predicted RBP	32.68	■■■□□ 2.82
ARHGAP4-215	ENST00000461739	FRMPD1	Q5SYB0	1578 aa		32.67	■■■□□ 2.82
ARHGAP4-215	ENST00000461739	SCAPER	Q9BY12	1400 aa		32.65	■■■□□ 2.82
ARHGAP4-215	ENST00000461739	RAPGEF3	O95398	923 aa		32.63	■■■□□ 2.81
ARHGAP4-215	ENST00000461739	ABCC1	P33527	1531 aa		32.61	■■■□□ 2.81
ARHGAP4-215	ENST00000461739	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.61	■■■□□ 2.81
ARHGAP4-215	ENST00000461739	SAMD9L	Q8IVG5	1584 aa		32.61	■■■□□ 2.81
ARHGAP4-215	ENST00000461739	POGZ	Q7Z3K3	1410 aa		32.6	■■■□□ 2.81
ARHGAP4-215	ENST00000461739	ZMYM4	Q5VZL5	1548 aa		32.56	■■■□□ 2.8
ARHGAP4-215	ENST00000461739	PLEKHH2	Q8IVE3	1493 aa		32.54	■■■□□ 2.8
ARHGAP4-215	ENST00000461739	ZNF518A	Q6AHZ1	1483 aa		32.54	■■■□□ 2.8
ARHGAP4-215	ENST00000461739	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.53	■■■□□ 2.8
ARHGAP4-215	ENST00000461739	ARHGEF12	Q9NZN5	1544 aa		32.52	■■■□□ 2.8
ARHGAP4-215	ENST00000461739	KIAA1107	Q9UPP5	1409 aa		32.51	■■■□□ 2.79
ARHGAP4-215	ENST00000461739	KDM5C	P41229	1560 aa		32.5	■■■□□ 2.79
ARHGAP4-215	ENST00000461739	SYCP2	Q9BX26	1530 aa		32.49	■■■□□ 2.79
ARHGAP4-215	ENST00000461739	MYOM3	Q5VTT5	1437 aa		32.49	■■■□□ 2.79
ARHGAP4-215	ENST00000461739	MAGI2	Q86UL8	1455 aa		32.48	■■■□□ 2.79
ARHGAP4-215	ENST00000461739	TRAPPC8	Q9Y2L5	1435 aa		32.45	■■■□□ 2.79
ARHGAP4-215	ENST00000461739	ARHGEF40	Q8TER5	1519 aa		32.45	■■■□□ 2.78
ARHGAP4-215	ENST00000461739	MIA2	Q96PC5	1412 aa		32.44	■■■□□ 2.78
ARHGAP4-215	ENST00000461739	CAMSAP2	Q08AD1	1489 aa		32.42	■■■□□ 2.78
ARHGAP4-215	ENST00000461739	ZFYVE16	Q7Z3T8	1539 aa		32.42	■■■□□ 2.78
ARHGAP4-215	ENST00000461739	AFAP1	Q8N556	730 aa		32.42	■■■□□ 2.78
ARHGAP4-215	ENST00000461739	ZNF644	Q9H582	1327 aa	Predicted RBP	32.42	■■■□□ 2.78
ARHGAP4-215	ENST00000461739	HECW2	Q9P2P5	1572 aa		32.41	■■■□□ 2.78
ARHGAP4-215	ENST00000461739	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.39	■■■□□ 2.78
ARHGAP4-215	ENST00000461739	MBD5	Q9P267	1494 aa		32.38	■■■□□ 2.77
ARHGAP4-215	ENST00000461739	MLH3	Q9UHC1	1453 aa		32.38	■■■□□ 2.77
ARHGAP4-215	ENST00000461739	YEATS2	Q9ULM3	1422 aa		32.35	■■■□□ 2.77
ARHGAP4-215	ENST00000461739	ARHGEF5	Q12774	1597 aa		32.32	■■■□□ 2.77
ARHGAP4-215	ENST00000461739	PTPN23	Q9H3S7	1636 aa		32.31	■■■□□ 2.76
ARHGAP4-215	ENST00000461739	KIDINS220	Q9ULH0	1771 aa		32.31	■■■□□ 2.76
ARHGAP4-215	ENST00000461739	FGD6	Q6ZV73	1430 aa		32.31	■■■□□ 2.76
ARHGAP4-215	ENST00000461739	RSPH4A	Q5TD94	716 aa		32.3	■■■□□ 2.76
ARHGAP4-215	ENST00000461739	CCDC141	Q6ZP82	1450 aa		32.29	■■■□□ 2.76
ARHGAP4-215	ENST00000461739	INO80	Q9ULG1	1556 aa	Predicted RBP	32.28	■■■□□ 2.76
ARHGAP4-215	ENST00000461739	ATP10A	O60312	1499 aa		32.27	■■■□□ 2.76
ARHGAP4-215	ENST00000461739	DIP2C	Q9Y2E4	1556 aa		32.27	■■■□□ 2.76
ARHGAP4-215	ENST00000461739	SPAG9	O60271	1321 aa	Known RBP	32.26	■■■□□ 2.76
ARHGAP4-215	ENST00000461739	ABCA6	Q8N139	1617 aa		32.26	■■■□□ 2.76
ARHGAP4-215	ENST00000461739	MYT1L	Q9UL68	1186 aa		32.26	■■■□□ 2.75
ARHGAP4-215	ENST00000461739	TCOF1	Q13428	1488 aa	Known RBP	32.26	■■■□□ 2.75
ARHGAP4-215	ENST00000461739	ATP7A	Q04656	1500 aa		32.25	■■■□□ 2.75
ARHGAP4-215	ENST00000461739	C9orf84	Q5VXU9	1444 aa		32.23	■■■□□ 2.75
ARHGAP4-215	ENST00000461739	RERE	Q9P2R6	1566 aa		32.23	■■■□□ 2.75
ARHGAP4-215	ENST00000461739	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.21	■■■□□ 2.75
ARHGAP4-215	ENST00000461739	SIGLEC1	Q9BZZ2	1709 aa		32.2	■■■□□ 2.74
ARHGAP4-215	ENST00000461739	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.19	■■■□□ 2.74
ARHGAP4-215	ENST00000461739	MAST1	Q9Y2H9	1570 aa		32.15	■■■□□ 2.74
ARHGAP4-215	ENST00000461739	DNMT1	P26358	1616 aa	Known RBP	32.14	■■■□□ 2.74
ARHGAP4-215	ENST00000461739	ADGB	Q8N7X0	1667 aa		32.14	■■■□□ 2.74
ARHGAP4-215	ENST00000461739	BCORL1	Q5H9F3	1711 aa		32.14	■■■□□ 2.74
ARHGAP4-215	ENST00000461739	CROCC2	H7BZ55	1655 aa		32.13	■■■□□ 2.73
ARHGAP4-215	ENST00000461739	TSPY4	P0CV99	314 aa		32.13	■■■□□ 2.73
ARHGAP4-215	ENST00000461739	TSPY10	P0CW01	314 aa		32.13	■■■□□ 2.73
ARHGAP4-215	ENST00000461739	ARID4B	Q4LE39	1312 aa	Predicted RBP	32.12	■■■□□ 2.73
ARHGAP4-215	ENST00000461739	KDM4F	A0A1W2PPD8	638 aa		32.12	■■■□□ 2.73
ARHGAP4-215	ENST00000461739	AGL	P35573	1532 aa		32.09	■■■□□ 2.73
ARHGAP4-215	ENST00000461739	SHANK2	Q9UPX8	1470 aa		32.08	■■■□□ 2.73
ARHGAP4-215	ENST00000461739	ADAMTSL3	P82987	1691 aa		32.08	■■■□□ 2.73
ARHGAP4-215	ENST00000461739	ABCC5	O15440	1437 aa		32.08	■■■□□ 2.73
ARHGAP4-215	ENST00000461739	DAPK1	P53355	1430 aa		32.08	■■■□□ 2.73
ARHGAP4-215	ENST00000461739	PLXNC1	O60486	1568 aa		32.07	■■■□□ 2.72
ARHGAP4-215	ENST00000461739	A2M	P01023	1474 aa		32.05	■■■□□ 2.72
ARHGAP4-215	ENST00000461739	FAM50A	Q14320	339 aa	Known RBP	32.04	■■■□□ 2.72
ARHGAP4-215	ENST00000461739	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.01	■■■□□ 2.71
ARHGAP4-215	ENST00000461739	RRBP1	Q9P2E9	1410 aa	Known RBP	31.98	■■■□□ 2.71
ARHGAP4-215	ENST00000461739	DHX29	Q7Z478	1369 aa	Known RBP	31.97	■■■□□ 2.71
ARHGAP4-215	ENST00000461739	MADD	Q8WXG6	1647 aa		31.97	■■■□□ 2.71
ARHGAP4-215	ENST00000461739	FER1L4	A9Z1Z3	1794 aa		31.94	■■■□□ 2.7
ARHGAP4-215	ENST00000461739	MLEC	Q14165	292 aa		31.92	■■■□□ 2.7
ARHGAP4-215	ENST00000461739	AEBP2	Q6ZN18	517 aa	Predicted RBP	31.89	■■■□□ 2.7
ARHGAP4-215	ENST00000461739	ADGRL2	O95490	1459 aa		31.89	■■■□□ 2.7
ARHGAP4-215	ENST00000461739	DUOX2	Q9NRD8	1548 aa		31.89	■■■□□ 2.7
ARHGAP4-215	ENST00000461739	RIMS1	Q86UR5	1692 aa	Known RBP	31.89	■■■□□ 2.7
ARHGAP4-215	ENST00000461739	ANKRD30A	Q9BXX3	1397 aa		31.87	■■■□□ 2.69
ARHGAP4-215	ENST00000461739	EIF2AK4	Q9P2K8	1649 aa	Known RBP	31.86	■■■□□ 2.69
ARHGAP4-215	ENST00000461739	KIF15	Q9NS87	1388 aa		31.85	■■■□□ 2.69
ARHGAP4-215	ENST00000461739	NCOA1	Q15788	1441 aa		31.84	■■■□□ 2.69
ARHGAP4-215	ENST00000461739	CHIC2	Q9UKJ5	165 aa		31.84	■■■□□ 2.69
ARHGAP4-215	ENST00000461739	PTPRM	P28827	1452 aa		31.84	■■■□□ 2.69
ARHGAP4-215	ENST00000461739	PTPRK	Q15262	1439 aa		31.83	■■■□□ 2.69
ARHGAP4-215	ENST00000461739	RRP7BP	Q9NSQ0	103 aa		31.8	■■■□□ 2.68
ARHGAP4-215	ENST00000461739	ERBIN	Q96RT1	1412 aa		31.79	■■■□□ 2.68
ARHGAP4-215	ENST00000461739	KIF3B	O15066	747 aa		31.78	■■■□□ 2.68
ARHGAP4-215	ENST00000461739	RNF17	Q9BXT8	1623 aa	Known RBP	31.78	■■■□□ 2.68
ARHGAP4-215	ENST00000461739	PPP6R1	Q9UPN7	881 aa		31.77	■■■□□ 2.68
ARHGAP4-215	ENST00000461739	ROCK1	Q13464	1354 aa		31.77	■■■□□ 2.68
ARHGAP4-215	ENST00000461739	CNTLN	Q9NXG0	1405 aa		31.76	■■■□□ 2.68

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