RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 PTPN23Q9H3S7 1636 aa5.9□□□□□ -1.46
ATP13A3-206ENST00000461660 ARHGEF11O15085 1522 aa5.9□□□□□ -1.46
ATP13A3-206ENST00000461660 MAGI3Q5TCQ9 1506 aa5.9□□□□□ -1.47
ATP13A3-206ENST00000461660 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.9□□□□□ -1.47
ATP13A3-206ENST00000461660 ARHGAP5Q13017 1502 aa5.89□□□□□ -1.47
ATP13A3-206ENST00000461660 HFM1A2PYH4 1435 aa5.89□□□□□ -1.47
ATP13A3-206ENST00000461660 CLASP1Q7Z460 1538 aa5.89□□□□□ -1.47
ATP13A3-206ENST00000461660 GPATCH8Q9UKJ3 1502 aaKnown RBP5.89□□□□□ -1.47
ATP13A3-206ENST00000461660 DAPK1P53355 1430 aa5.89□□□□□ -1.47
ATP13A3-206ENST00000461660 ZNF316A6NFI3 1004 aaPredicted RBP5.88□□□□□ -1.47
ATP13A3-206ENST00000461660 CAMSAP2Q08AD1 1489 aa5.88□□□□□ -1.47
ATP13A3-206ENST00000461660 PLEKHH2Q8IVE3 1493 aa5.88□□□□□ -1.47
ATP13A3-206ENST00000461660 ERCC6L2Q5T890 1561 aa5.88□□□□□ -1.47
ATP13A3-206ENST00000461660 SPAG9O60271 1321 aaKnown RBP5.88□□□□□ -1.47
ATP13A3-206ENST00000461660 SIN3AQ96ST3 1273 aa5.87□□□□□ -1.47
ATP13A3-206ENST00000461660 TCOF1Q13428 1488 aaKnown RBP5.87□□□□□ -1.47
ATP13A3-206ENST00000461660 NAIPQ13075 1403 aa5.87□□□□□ -1.47
ATP13A3-206ENST00000461660 UHRF1BP1LA0JNW5 1464 aa5.87□□□□□ -1.47
ATP13A3-206ENST00000461660 ABCC5O15440 1437 aa5.87□□□□□ -1.47
ATP13A3-206ENST00000461660 MPHOSPH9Q99550 1183 aa5.87□□□□□ -1.47
ATP13A3-206ENST00000461660 ROCK1Q13464 1354 aa5.87□□□□□ -1.47
ATP13A3-206ENST00000461660 KIF15Q9NS87 1388 aa5.87□□□□□ -1.47
ATP13A3-206ENST00000461660 C9orf84Q5VXU9 1444 aa5.86□□□□□ -1.47
ATP13A3-206ENST00000461660 SHROOM2Q13796 1616 aa5.86□□□□□ -1.47
ATP13A3-206ENST00000461660 ITSN2Q9NZM3 1697 aa5.86□□□□□ -1.47
ATP13A3-206ENST00000461660 TIMELESSQ9UNS1 1208 aa5.86□□□□□ -1.47
ATP13A3-206ENST00000461660 NUP155O75694 1391 aa5.86□□□□□ -1.47
ATP13A3-206ENST00000461660 PTPRKQ15262 1439 aa5.85□□□□□ -1.47
ATP13A3-206ENST00000461660 AKNAQ7Z591 1439 aa5.85□□□□□ -1.47
ATP13A3-206ENST00000461660 ANKRD50Q9ULJ7 1429 aa5.85□□□□□ -1.47
ATP13A3-206ENST00000461660 WDR7Q9Y4E6 1490 aa5.85□□□□□ -1.47
ATP13A3-206ENST00000461660 ZNF326Q5BKZ1 582 aaKnown RBP5.85□□□□□ -1.47
ATP13A3-206ENST00000461660 DIEXFQ68CQ4 756 aaKnown RBP5.85□□□□□ -1.47
ATP13A3-206ENST00000461660 CCDC141Q6ZP82 1450 aa5.85□□□□□ -1.47
ATP13A3-206ENST00000461660 KDM5BQ9UGL1 1544 aa5.85□□□□□ -1.47
ATP13A3-206ENST00000461660 ASXL2Q76L83 1435 aa5.85□□□□□ -1.47
ATP13A3-206ENST00000461660 PKD2Q13563 968 aa5.85□□□□□ -1.47
ATP13A3-206ENST00000461660 PLCH2O75038 1416 aa5.84□□□□□ -1.48
ATP13A3-206ENST00000461660 FAM69CQ0P6D2 419 aa5.83□□□□□ -1.48
ATP13A3-206ENST00000461660 ABCC10Q5T3U5 1492 aa5.83□□□□□ -1.48
ATP13A3-206ENST00000461660 AFAP1Q8N556 730 aa5.83□□□□□ -1.48
ATP13A3-206ENST00000461660 KANK1Q14678 1352 aa5.83□□□□□ -1.48
ATP13A3-206ENST00000461660 NCOA1Q15788 1441 aa5.83□□□□□ -1.48
ATP13A3-206ENST00000461660 CD109Q6YHK3 1445 aa5.83□□□□□ -1.48
ATP13A3-206ENST00000461660 LRRIQ1Q96JM4 1722 aa5.82□□□□□ -1.48
ATP13A3-206ENST00000461660 SCAPERQ9BY12 1400 aa5.82□□□□□ -1.48
ATP13A3-206ENST00000461660 KIF3BO15066 747 aa5.82□□□□□ -1.48
ATP13A3-206ENST00000461660 KIAA1107Q9UPP5 1409 aa5.82□□□□□ -1.48
ATP13A3-206ENST00000461660 FANCAO15360 1455 aa5.82□□□□□ -1.48
ATP13A3-206ENST00000461660 DNMT1P26358 1616 aaKnown RBP5.81□□□□□ -1.48
ATP13A3-206ENST00000461660 ZCCHC11Q5TAX3 1644 aaKnown RBP5.81□□□□□ -1.48
ATP13A3-206ENST00000461660 ADCY10Q96PN6 1610 aa5.81□□□□□ -1.48
ATP13A3-206ENST00000461660 ADGRL1O94910 1474 aa5.81□□□□□ -1.48
ATP13A3-206ENST00000461660 ESF1Q9H501 851 aaKnown RBP5.81□□□□□ -1.48
ATP13A3-206ENST00000461660 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.8□□□□□ -1.48
ATP13A3-206ENST00000461660 SYCP2Q9BX26 1530 aa5.8□□□□□ -1.48
ATP13A3-206ENST00000461660 SHANK2Q9UPX8 1470 aa5.8□□□□□ -1.48
ATP13A3-206ENST00000461660 POLR3GLQ9BT43 218 aa5.8□□□□□ -1.48
ATP13A3-206ENST00000461660 PPP1R15AO75807 674 aaPredicted RBP5.79□□□□□ -1.48
ATP13A3-206ENST00000461660 TRHP20396 242 aaPredicted RBP5.79□□□□□ -1.48
ATP13A3-206ENST00000461660 GGT6Q6P531 493 aa5.79□□□□□ -1.48
ATP13A3-206ENST00000461660 KDM2AQ9Y2K7 1162 aa5.79□□□□□ -1.48
ATP13A3-206ENST00000461660 CHGAP10645 457 aaKnown RBP5.79□□□□□ -1.48
ATP13A3-206ENST00000461660 TTC37Q6PGP7 1564 aa5.79□□□□□ -1.48
ATP13A3-206ENST00000461660 ADGRL2O95490 1459 aa5.78□□□□□ -1.48
ATP13A3-206ENST00000461660 RGL3Q3MIN7 710 aa5.78□□□□□ -1.48
ATP13A3-206ENST00000461660 L3MBTL2Q969R5 705 aa5.78□□□□□ -1.48
ATP13A3-206ENST00000461660 TRAPPC8Q9Y2L5 1435 aa5.78□□□□□ -1.48
ATP13A3-206ENST00000461660 EIF4G2P78344 907 aaKnown RBP eCLIP5.78□□□□□ -1.48
ATP13A3-206ENST00000461660 PREX2Q70Z35 1606 aa5.78□□□□□ -1.48
ATP13A3-206ENST00000461660 MBD5Q9P267 1494 aa5.77□□□□□ -1.49
ATP13A3-206ENST00000461660 MYO5CQ9NQX4 1742 aa5.77□□□□□ -1.49
ATP13A3-206ENST00000461660 RAPGEF3O95398 923 aa5.77□□□□□ -1.49
ATP13A3-206ENST00000461660 ARHGEF5Q12774 1597 aa5.77□□□□□ -1.49
ATP13A3-206ENST00000461660 CCDC144AA2RUR9 1427 aa5.77□□□□□ -1.49
ATP13A3-206ENST00000461660 MAPKBP1O60336 1514 aa5.77□□□□□ -1.49
ATP13A3-206ENST00000461660 SAMD9LQ8IVG5 1584 aa5.76□□□□□ -1.49
ATP13A3-206ENST00000461660 CDC42BPAQ5VT25 1732 aa5.76□□□□□ -1.49
ATP13A3-206ENST00000461660 ARID4BQ4LE39 1312 aaPredicted RBP5.76□□□□□ -1.49
ATP13A3-206ENST00000461660 DENND4BO75064 1496 aaPredicted RBP5.76□□□□□ -1.49
ATP13A3-206ENST00000461660 DCAF11Q8TEB1 546 aa5.76□□□□□ -1.49
ATP13A3-206ENST00000461660 HIRIP3Q9BW71 556 aaPredicted RBP5.76□□□□□ -1.49
ATP13A3-206ENST00000461660 WASHC2CQ9Y4E1 1318 aa5.76□□□□□ -1.49
ATP13A3-206ENST00000461660 CENPBP07199 599 aaPredicted RBP5.75□□□□□ -1.49
ATP13A3-206ENST00000461660 ZNF518AQ6AHZ1 1483 aa5.75□□□□□ -1.49
ATP13A3-206ENST00000461660 GCC2Q8IWJ2 1684 aa5.75□□□□□ -1.49
ATP13A3-206ENST00000461660 STAG3Q9UJ98 1225 aa5.75□□□□□ -1.49
ATP13A3-206ENST00000461660 ARAP3Q8WWN8 1544 aa5.75□□□□□ -1.49
ATP13A3-206ENST00000461660 DUOX2Q9NRD8 1548 aa5.75□□□□□ -1.49
ATP13A3-206ENST00000461660 ANKRD30BQ9BXX2 1392 aa5.75□□□□□ -1.49
ATP13A3-206ENST00000461660 RTEL1-TNFRSF6BF6WH68 1400 aa5.75□□□□□ -1.49
ATP13A3-206ENST00000461660 DDX10Q13206 875 aaKnown RBP5.74□□□□□ -1.49
ATP13A3-206ENST00000461660 ABCC1P33527 1531 aa5.74□□□□□ -1.49
ATP13A3-206ENST00000461660 ERBINQ96RT1 1412 aa5.74□□□□□ -1.49
ATP13A3-206ENST00000461660 MLECQ14165 292 aa5.74□□□□□ -1.49
ATP13A3-206ENST00000461660 YTHDC1Q96MU7 727 aaKnown RBP5.74□□□□□ -1.49
ATP13A3-206ENST00000461660 ADGBQ8N7X0 1667 aa5.74□□□□□ -1.49
ATP13A3-206ENST00000461660 CARD11Q9BXL7 1154 aa5.74□□□□□ -1.49
ATP13A3-206ENST00000461660 DHX29Q7Z478 1369 aaKnown RBP5.74□□□□□ -1.49
ATP13A3-206ENST00000461660 TEX14Q8IWB6 1497 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms