RNA–Protein interactions for RNA: ENST00000461603.5

LMBR1-215, Transcript of limb development membrane protein 1, humanhuman

TSL 4

Gene LMBR1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-215ENST00000461603 POTEB2H3BUK9 544 aa11.38□□□□□ -0.59
LMBR1-215ENST00000461603 GTPBP6O43824 516 aaPredicted RBP11.35□□□□□ -0.59
LMBR1-215ENST00000461603 CUX2O14529 1486 aa11.35□□□□□ -0.59
LMBR1-215ENST00000461603 DPY19L2Q6NUT2 758 aa11.34□□□□□ -0.59
LMBR1-215ENST00000461603 SPRYD3Q8NCJ5 442 aa11.33□□□□□ -0.6
LMBR1-215ENST00000461603 POTEJP0CG39 1038 aa11.32□□□□□ -0.6
LMBR1-215ENST00000461603 C3orf67Q6ZVT6 689 aa11.31□□□□□ -0.6
LMBR1-215ENST00000461603 MICALL2Q8IY33 904 aa11.31□□□□□ -0.6
LMBR1-215ENST00000461603 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.31□□□□□ -0.6
LMBR1-215ENST00000461603 ERCC6Q03468 1493 aa11.28□□□□□ -0.6
LMBR1-215ENST00000461603 OTUD5Q96G74 571 aa11.28□□□□□ -0.6
LMBR1-215ENST00000461603 PPP1R37O75864 691 aa11.24□□□□□ -0.61
LMBR1-215ENST00000461603 PAXIP1Q6ZW49 1069 aaPredicted RBP11.2□□□□□ -0.62
LMBR1-215ENST00000461603 SLAIN1Q8ND83 568 aa11.19□□□□□ -0.62
LMBR1-215ENST00000461603 SNPHO15079 494 aa11.17□□□□□ -0.62
LMBR1-215ENST00000461603 CFAP44Q96MT7 982 aa11.16□□□□□ -0.62
LMBR1-215ENST00000461603 KIF3CO14782 793 aa11.15□□□□□ -0.62
LMBR1-215ENST00000461603 PLCB2Q00722 1185 aa11.15□□□□□ -0.62
LMBR1-215ENST00000461603 PDE4AP27815 886 aa11.13□□□□□ -0.63
LMBR1-215ENST00000461603 TMC2Q8TDI7 906 aa11.13□□□□□ -0.63
LMBR1-215ENST00000461603 GPHNQ9NQX3 736 aaPredicted RBP11.13□□□□□ -0.63
LMBR1-215ENST00000461603 CRISPLD2Q9H0B8 497 aa11.11□□□□□ -0.63
LMBR1-215ENST00000461603 TMEM92Q6UXU6 159 aa11.1□□□□□ -0.63
LMBR1-215ENST00000461603 NESP48681 1621 aa11.09□□□□□ -0.63
LMBR1-215ENST00000461603 NCAPD3P42695 1498 aa11.09□□□□□ -0.63
LMBR1-215ENST00000461603 FOXK1P85037 733 aa11.08□□□□□ -0.64
LMBR1-215ENST00000461603 C2orf72A6NCS6 295 aa11.07□□□□□ -0.64
LMBR1-215ENST00000461603 MFSD10Q14728 455 aa11.05□□□□□ -0.64
LMBR1-215ENST00000461603 DOK7Q18PE1 504 aa11.05□□□□□ -0.64
LMBR1-215ENST00000461603 ZSWIM6Q9HCJ5 1215 aa11.05□□□□□ -0.64
LMBR1-215ENST00000461603 SLC34A2O95436 690 aa11.04□□□□□ -0.64
LMBR1-215ENST00000461603 THOC2Q8NI27 1593 aaKnown RBP11.03□□□□□ -0.64
LMBR1-215ENST00000461603 NCKAP5LQ9HCH0 1330 aa11.03□□□□□ -0.64
LMBR1-215ENST00000461603 ATAD2BQ9ULI0 1458 aa11.02□□□□□ -0.65
LMBR1-215ENST00000461603 RIMBP2O15034 1052 aa11.02□□□□□ -0.65
LMBR1-215ENST00000461603 DDX27Q96GQ7 796 aaKnown RBP11□□□□□ -0.65
LMBR1-215ENST00000461603 CADPS2Q86UW7 1296 aa10.99□□□□□ -0.65
LMBR1-215ENST00000461603 HMGXB3Q12766 1538 aa10.99□□□□□ -0.65
LMBR1-215ENST00000461603 SMARCA2P51531 1590 aa10.99□□□□□ -0.65
LMBR1-215ENST00000461603 HOXB3P14651 431 aaPredicted RBP10.98□□□□□ -0.65
LMBR1-215ENST00000461603 DSG2Q14126 1118 aa10.98□□□□□ -0.65
LMBR1-215ENST00000461603 PPP1R15BQ5SWA1 713 aa10.98□□□□□ -0.65
LMBR1-215ENST00000461603 LARP6Q9BRS8 491 aaKnown RBP10.98□□□□□ -0.65
LMBR1-215ENST00000461603 PLPP6Q8IY26 295 aa10.97□□□□□ -0.65
LMBR1-215ENST00000461603 TSHZ2Q9NRE2 1034 aa10.95□□□□□ -0.66
LMBR1-215ENST00000461603 ZNF710Q8N1W2 664 aa10.94□□□□□ -0.66
LMBR1-215ENST00000461603 PTCD2Q8WV60 388 aaKnown RBP10.94□□□□□ -0.66
LMBR1-215ENST00000461603 KIF21AQ7Z4S6 1674 aa10.93□□□□□ -0.66
LMBR1-215ENST00000461603 WDR70Q9NW82 654 aa10.93□□□□□ -0.66
LMBR1-215ENST00000461603 SMARCA4P51532 1647 aa10.92□□□□□ -0.66
LMBR1-215ENST00000461603 TBC1D12O60347 775 aa10.92□□□□□ -0.66
LMBR1-215ENST00000461603 CAMK2BQ13554 666 aa10.92□□□□□ -0.66
LMBR1-215ENST00000461603 LAMC3Q9Y6N6 1575 aa10.91□□□□□ -0.66
LMBR1-215ENST00000461603 BAZ1BQ9UIG0 1483 aaKnown RBP10.91□□□□□ -0.66
LMBR1-215ENST00000461603 HOXB1P14653 301 aaPredicted RBP10.9□□□□□ -0.66
LMBR1-215ENST00000461603 ST18O60284 1047 aa10.89□□□□□ -0.67
LMBR1-215ENST00000461603 HAP1P54257 671 aaPredicted RBP10.88□□□□□ -0.67
LMBR1-215ENST00000461603 GPR153Q6NV75 609 aa10.88□□□□□ -0.67
LMBR1-215ENST00000461603 VSIG10Q8N0Z9 540 aa10.88□□□□□ -0.67
LMBR1-215ENST00000461603 OXER1Q8TDS5 423 aa10.88□□□□□ -0.67
LMBR1-215ENST00000461603 FAM163AQ96GL9 167 aaPredicted RBP10.88□□□□□ -0.67
LMBR1-215ENST00000461603 ARIH1Q9Y4X5 557 aaPredicted RBP10.88□□□□□ -0.67
LMBR1-215ENST00000461603 PDS5BQ9NTI5 1447 aa10.86□□□□□ -0.67
LMBR1-215ENST00000461603 E2F4Q16254 413 aa10.85□□□□□ -0.67
LMBR1-215ENST00000461603 PCDHGA4Q9Y5G9 962 aa10.85□□□□□ -0.67
LMBR1-215ENST00000461603 LCE2DQ5TA82 110 aaPredicted RBP10.84□□□□□ -0.67
LMBR1-215ENST00000461603 BAZ1AQ9NRL2 1556 aaPredicted RBP10.83□□□□□ -0.68
LMBR1-215ENST00000461603 P3H3Q8IVL6 736 aa10.83□□□□□ -0.68
LMBR1-215ENST00000461603 MRC2Q9UBG0 1479 aa10.81□□□□□ -0.68
LMBR1-215ENST00000461603 PSDA5PKW4 1024 aaPredicted RBP10.8□□□□□ -0.68
LMBR1-215ENST00000461603 ZNF316A6NFI3 1004 aaPredicted RBP10.8□□□□□ -0.68
LMBR1-215ENST00000461603 PEG3Q9GZU2 1588 aa10.79□□□□□ -0.68
LMBR1-215ENST00000461603 KDM4FA0A1W2PPD8 638 aa10.79□□□□□ -0.68
LMBR1-215ENST00000461603 ARSIQ5FYB1 569 aa10.79□□□□□ -0.68
LMBR1-215ENST00000461603 WDR62O43379 1518 aa10.79□□□□□ -0.68
LMBR1-215ENST00000461603 EMILIN3Q9NT22 766 aa10.78□□□□□ -0.68
LMBR1-215ENST00000461603 EMP3P54852 163 aa10.77□□□□□ -0.69
LMBR1-215ENST00000461603 MAP3K9P80192 1104 aa10.77□□□□□ -0.69
LMBR1-215ENST00000461603 ANO8Q9HCE9 1232 aaPredicted RBP10.77□□□□□ -0.69
LMBR1-215ENST00000461603 SPDYE16A6NNV3 312 aaPredicted RBP10.76□□□□□ -0.69
LMBR1-215ENST00000461603 ARHGEF1Q92888 912 aaKnown RBP10.76□□□□□ -0.69
LMBR1-215ENST00000461603 PCDH10Q9P2E7 1040 aa10.76□□□□□ -0.69
LMBR1-215ENST00000461603 CADPSQ9ULU8 1353 aa10.75□□□□□ -0.69
LMBR1-215ENST00000461603 UPF1Q92900 1129 aaKnown RBP eCLIP10.73□□□□□ -0.69
LMBR1-215ENST00000461603 NUDT7P0C024 238 aa10.72□□□□□ -0.69
LMBR1-215ENST00000461603 POTEGQ6S5H5 508 aa10.72□□□□□ -0.69
LMBR1-215ENST00000461603 POTEMA6NI47 508 aa10.71□□□□□ -0.69
LMBR1-215ENST00000461603 EVI5O60447 810 aa10.71□□□□□ -0.69
LMBR1-215ENST00000461603 PDIA6Q15084 440 aa10.71□□□□□ -0.69
LMBR1-215ENST00000461603 MROH2BQ7Z745 1585 aa10.71□□□□□ -0.69
LMBR1-215ENST00000461603 KDM2AQ9Y2K7 1162 aa10.71□□□□□ -0.69
LMBR1-215ENST00000461603 RIMBP3CA6NJZ7 1639 aa10.7□□□□□ -0.7
LMBR1-215ENST00000461603 RIMBP3BA6NNM3 1639 aa10.7□□□□□ -0.7
LMBR1-215ENST00000461603 RIMBP3Q9UFD9 1639 aa10.7□□□□□ -0.7
LMBR1-215ENST00000461603 ERBB3P21860 1342 aa10.7□□□□□ -0.7
LMBR1-215ENST00000461603 PTGER2P43116 358 aa10.7□□□□□ -0.7
LMBR1-215ENST00000461603 CEP164Q9UPV0 1460 aa10.69□□□□□ -0.7
LMBR1-215ENST00000461603 MARVELD3Q96A59 401 aa10.69□□□□□ -0.7
LMBR1-215ENST00000461603 DPYSL4O14531 572 aa10.68□□□□□ -0.7
LMBR1-215ENST00000461603 KCNV2Q8TDN2 545 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms