RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 ADGRL1O94910 1474 aa16.7■□□□□ 0.26
TRAPPC12-213ENST00000461577 CDC42BPAQ5VT25 1732 aa16.7■□□□□ 0.26
TRAPPC12-213ENST00000461577 RICTORQ6R327 1708 aa16.68■□□□□ 0.26
TRAPPC12-213ENST00000461577 APLP2Q06481 763 aa16.68■□□□□ 0.26
TRAPPC12-213ENST00000461577 SCAPERQ9BY12 1400 aa16.68■□□□□ 0.26
TRAPPC12-213ENST00000461577 FRMPD1Q5SYB0 1578 aa16.68■□□□□ 0.26
TRAPPC12-213ENST00000461577 CCNB3Q8WWL7 1395 aa16.67■□□□□ 0.26
TRAPPC12-213ENST00000461577 SUPT6HQ7KZ85 1726 aaKnown RBP16.66■□□□□ 0.26
TRAPPC12-213ENST00000461577 MAP3K1Q13233 1512 aa16.65■□□□□ 0.26
TRAPPC12-213ENST00000461577 GPATCH8Q9UKJ3 1502 aaKnown RBP16.65■□□□□ 0.26
TRAPPC12-213ENST00000461577 ZNF777Q9ULD5 760 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC12-213ENST00000461577 POGZQ7Z3K3 1410 aa16.63■□□□□ 0.25
TRAPPC12-213ENST00000461577 LRRC9Q6ZRR7 1453 aa16.63■□□□□ 0.25
TRAPPC12-213ENST00000461577 CFDP1Q9UEE9 299 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC12-213ENST00000461577 ITSN2Q9NZM3 1697 aa16.62■□□□□ 0.25
TRAPPC12-213ENST00000461577 AEBP2Q6ZN18 517 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC12-213ENST00000461577 NCOA2Q15596 1464 aa16.61■□□□□ 0.25
TRAPPC12-213ENST00000461577 ABCC1P33527 1531 aa16.6■□□□□ 0.25
TRAPPC12-213ENST00000461577 ZMYM4Q5VZL5 1548 aa16.6■□□□□ 0.25
TRAPPC12-213ENST00000461577 ZNF518AQ6AHZ1 1483 aa16.6■□□□□ 0.25
TRAPPC12-213ENST00000461577 KANK4Q5T7N3 995 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC12-213ENST00000461577 MYT1LQ9UL68 1186 aa16.59■□□□□ 0.25
TRAPPC12-213ENST00000461577 SAMD9LQ8IVG5 1584 aa16.59■□□□□ 0.25
TRAPPC12-213ENST00000461577 MAGI2Q86UL8 1455 aa16.58■□□□□ 0.24
TRAPPC12-213ENST00000461577 ZFYVE16Q7Z3T8 1539 aa16.58■□□□□ 0.24
TRAPPC12-213ENST00000461577 ARHGEF40Q8TER5 1519 aa16.58■□□□□ 0.24
TRAPPC12-213ENST00000461577 AFAP1Q8N556 730 aa16.57■□□□□ 0.24
TRAPPC12-213ENST00000461577 PLEKHH2Q8IVE3 1493 aa16.56■□□□□ 0.24
TRAPPC12-213ENST00000461577 KDM4FA0A1W2PPD8 638 aa16.56■□□□□ 0.24
TRAPPC12-213ENST00000461577 ARHGEF12Q9NZN5 1544 aa16.55■□□□□ 0.24
TRAPPC12-213ENST00000461577 TRAPPC8Q9Y2L5 1435 aa16.55■□□□□ 0.24
TRAPPC12-213ENST00000461577 KDM5CP41229 1560 aa16.55■□□□□ 0.24
TRAPPC12-213ENST00000461577 SYCP2Q9BX26 1530 aa16.55■□□□□ 0.24
TRAPPC12-213ENST00000461577 YEATS2Q9ULM3 1422 aa16.54■□□□□ 0.24
TRAPPC12-213ENST00000461577 HNRNPMP52272 730 aaKnown RBP eCLIP16.54■□□□□ 0.241e-6■■■■□ 26.1
TRAPPC12-213ENST00000461577 HECW2Q9P2P5 1572 aa16.54■□□□□ 0.24
TRAPPC12-213ENST00000461577 ARID4BQ4LE39 1312 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC12-213ENST00000461577 KIAA1107Q9UPP5 1409 aa16.53■□□□□ 0.24
TRAPPC12-213ENST00000461577 ZNF644Q9H582 1327 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC12-213ENST00000461577 MLH3Q9UHC1 1453 aa16.5■□□□□ 0.23
TRAPPC12-213ENST00000461577 ATP10AO60312 1499 aa16.49■□□□□ 0.23
TRAPPC12-213ENST00000461577 CAMSAP2Q08AD1 1489 aa16.48■□□□□ 0.23
TRAPPC12-213ENST00000461577 SPAG9O60271 1321 aaKnown RBP16.48■□□□□ 0.23
TRAPPC12-213ENST00000461577 C9orf84Q5VXU9 1444 aa16.48■□□□□ 0.23
TRAPPC12-213ENST00000461577 MYOM3Q5VTT5 1437 aa16.47■□□□□ 0.23
TRAPPC12-213ENST00000461577 KIDINS220Q9ULH0 1771 aa16.46■□□□□ 0.23
TRAPPC12-213ENST00000461577 BCORL1Q5H9F3 1711 aa16.46■□□□□ 0.23
TRAPPC12-213ENST00000461577 DIP2CQ9Y2E4 1556 aa16.46■□□□□ 0.23
TRAPPC12-213ENST00000461577 MIA2Q96PC5 1412 aa16.45■□□□□ 0.22
TRAPPC12-213ENST00000461577 ABCA6Q8N139 1617 aa16.45■□□□□ 0.22
TRAPPC12-213ENST00000461577 MBD5Q9P267 1494 aa16.45■□□□□ 0.22
TRAPPC12-213ENST00000461577 RSPH4AQ5TD94 716 aa16.44■□□□□ 0.22
TRAPPC12-213ENST00000461577 SIGLEC1Q9BZZ2 1709 aa16.43■□□□□ 0.22
TRAPPC12-213ENST00000461577 ATP7AQ04656 1500 aa16.43■□□□□ 0.22
TRAPPC12-213ENST00000461577 ADAMTSL3P82987 1691 aa16.43■□□□□ 0.22
TRAPPC12-213ENST00000461577 CCDC141Q6ZP82 1450 aa16.42■□□□□ 0.22
TRAPPC12-213ENST00000461577 MLECQ14165 292 aa16.42■□□□□ 0.22
TRAPPC12-213ENST00000461577 REREQ9P2R6 1566 aa16.42■□□□□ 0.22
TRAPPC12-213ENST00000461577 INO80Q9ULG1 1556 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC12-213ENST00000461577 ARHGEF5Q12774 1597 aa16.41■□□□□ 0.22
TRAPPC12-213ENST00000461577 PTPN23Q9H3S7 1636 aa16.4■□□□□ 0.22
TRAPPC12-213ENST00000461577 MADDQ8WXG6 1647 aa16.39■□□□□ 0.21
TRAPPC12-213ENST00000461577 TSPY4P0CV99 314 aa16.39■□□□□ 0.21
TRAPPC12-213ENST00000461577 TSPY10P0CW01 314 aa16.39■□□□□ 0.21
TRAPPC12-213ENST00000461577 RTEL1-TNFRSF6BF6WH68 1400 aa16.38■□□□□ 0.21
TRAPPC12-213ENST00000461577 FGD6Q6ZV73 1430 aa16.37■□□□□ 0.21
TRAPPC12-213ENST00000461577 RIMS1Q86UR5 1692 aaKnown RBP16.37■□□□□ 0.21
TRAPPC12-213ENST00000461577 ADGBQ8N7X0 1667 aa16.37■□□□□ 0.21
TRAPPC12-213ENST00000461577 AGLP35573 1532 aa16.36■□□□□ 0.21
TRAPPC12-213ENST00000461577 FER1L4A9Z1Z3 1794 aa16.36■□□□□ 0.21
TRAPPC12-213ENST00000461577 A2MP01023 1474 aa16.35■□□□□ 0.21
TRAPPC12-213ENST00000461577 PPARGC1BQ86YN6 1023 aaKnown RBP16.35■□□□□ 0.21
TRAPPC12-213ENST00000461577 PTPRMP28827 1452 aa16.34■□□□□ 0.21
TRAPPC12-213ENST00000461577 TCOF1Q13428 1488 aaKnown RBP16.34■□□□□ 0.21
TRAPPC12-213ENST00000461577 MAST1Q9Y2H9 1570 aa16.32■□□□□ 0.2
TRAPPC12-213ENST00000461577 PLXNC1O60486 1568 aa16.31■□□□□ 0.2
TRAPPC12-213ENST00000461577 FAM50AQ14320 339 aaKnown RBP16.31■□□□□ 0.2
TRAPPC12-213ENST00000461577 ESF1Q9H501 851 aaKnown RBP16.31■□□□□ 0.2
TRAPPC12-213ENST00000461577 PLPPR3Q6T4P5 718 aa16.3■□□□□ 0.2
TRAPPC12-213ENST00000461577 CROCC2H7BZ55 1655 aa16.3■□□□□ 0.2
TRAPPC12-213ENST00000461577 DHX29Q7Z478 1369 aaKnown RBP16.29■□□□□ 0.2
TRAPPC12-213ENST00000461577 DNMT1P26358 1616 aaKnown RBP16.29■□□□□ 0.2
TRAPPC12-213ENST00000461577 ABCC5O15440 1437 aa16.28■□□□□ 0.2
TRAPPC12-213ENST00000461577 DAPK1P53355 1430 aa16.28■□□□□ 0.2
TRAPPC12-213ENST00000461577 SHANK2Q9UPX8 1470 aa16.27■□□□□ 0.19
TRAPPC12-213ENST00000461577 GGT6Q6P531 493 aa16.26■□□□□ 0.19
TRAPPC12-213ENST00000461577 KIF3BO15066 747 aa16.25■□□□□ 0.19
TRAPPC12-213ENST00000461577 CNTLNQ9NXG0 1405 aa16.24■□□□□ 0.19
TRAPPC12-213ENST00000461577 CHIC2Q9UKJ5 165 aa16.23■□□□□ 0.19
TRAPPC12-213ENST00000461577 DUOX2Q9NRD8 1548 aa16.21■□□□□ 0.19
TRAPPC12-213ENST00000461577 CEBPAP49715 358 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC12-213ENST00000461577 RRP7BPQ9NSQ0 103 aa16.21■□□□□ 0.19
TRAPPC12-213ENST00000461577 PPP6R1Q9UPN7 881 aa16.21■□□□□ 0.19
TRAPPC12-213ENST00000461577 ANKRD30AQ9BXX3 1397 aa16.21■□□□□ 0.19
TRAPPC12-213ENST00000461577 KIF15Q9NS87 1388 aa16.21■□□□□ 0.19
TRAPPC12-213ENST00000461577 CLTCQ00610 1675 aaKnown RBP16.21■□□□□ 0.18
TRAPPC12-213ENST00000461577 MROH2AA6NES4 1674 aa16.2■□□□□ 0.18
TRAPPC12-213ENST00000461577 C3P01024 1663 aa16.2■□□□□ 0.18
TRAPPC12-213ENST00000461577 EIF2AK4Q9P2K8 1649 aaKnown RBP16.19■□□□□ 0.18
TRAPPC12-213ENST00000461577 ADGRL2O95490 1459 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms