RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 POGZQ7Z3K3 1410 aa24.71■■□□□ 1.55
COL16A1-206ENST00000461217 YEATS2Q9ULM3 1422 aa24.71■■□□□ 1.55
COL16A1-206ENST00000461217 MAGI2Q86UL8 1455 aa24.7■■□□□ 1.55
COL16A1-206ENST00000461217 RIMS1Q86UR5 1692 aaKnown RBP24.7■■□□□ 1.54
COL16A1-206ENST00000461217 LRRIQ1Q96JM4 1722 aa24.69■■□□□ 1.54
COL16A1-206ENST00000461217 EFCAB2Q5VUJ9 269 aa24.69■■□□□ 1.54
COL16A1-206ENST00000461217 ILDR1Q86SU0 546 aaPredicted RBP24.69■■□□□ 1.54
COL16A1-206ENST00000461217 PCF11O94913 1555 aaKnown RBP24.67■■□□□ 1.54
COL16A1-206ENST00000461217 ARHGAP5Q13017 1502 aa24.67■■□□□ 1.54
COL16A1-206ENST00000461217 CCDC18Q5T9S5 1454 aa24.64■■□□□ 1.53
COL16A1-206ENST00000461217 SIGLEC1Q9BZZ2 1709 aa24.64■■□□□ 1.53
COL16A1-206ENST00000461217 CASKIN1Q8WXD9 1431 aa24.62■■□□□ 1.53
COL16A1-206ENST00000461217 PLPPR3Q6T4P5 718 aa24.62■■□□□ 1.53
COL16A1-206ENST00000461217 MLECQ14165 292 aa24.61■■□□□ 1.53
COL16A1-206ENST00000461217 ZNF518AQ6AHZ1 1483 aa24.59■■□□□ 1.53
COL16A1-206ENST00000461217 C9orf84Q5VXU9 1444 aa24.58■■□□□ 1.53
COL16A1-206ENST00000461217 ATP10AO60312 1499 aa24.58■■□□□ 1.52
COL16A1-206ENST00000461217 MYT1LQ9UL68 1186 aa24.57■■□□□ 1.52
COL16A1-206ENST00000461217 FER1L4A9Z1Z3 1794 aa24.56■■□□□ 1.52
COL16A1-206ENST00000461217 PREX2Q70Z35 1606 aa24.55■■□□□ 1.52
COL16A1-206ENST00000461217 LMTK3Q96Q04 1460 aa24.55■■□□□ 1.52
COL16A1-206ENST00000461217 FYCO1Q9BQS8 1478 aa24.55■■□□□ 1.52
COL16A1-206ENST00000461217 CDC42BPBQ9Y5S2 1711 aa24.55■■□□□ 1.52
COL16A1-206ENST00000461217 KDM5CP41229 1560 aa24.53■■□□□ 1.52
COL16A1-206ENST00000461217 AFAP1Q8N556 730 aa24.52■■□□□ 1.52
COL16A1-206ENST00000461217 ABCC1P33527 1531 aa24.48■■□□□ 1.51
COL16A1-206ENST00000461217 ARHGEF12Q9NZN5 1544 aa24.48■■□□□ 1.51
COL16A1-206ENST00000461217 DIP2CQ9Y2E4 1556 aa24.46■■□□□ 1.51
COL16A1-206ENST00000461217 ITSN2Q9NZM3 1697 aa24.46■■□□□ 1.51
COL16A1-206ENST00000461217 CDC42BPAQ5VT25 1732 aa24.45■■□□□ 1.5
COL16A1-206ENST00000461217 HSPA2P54652 639 aa24.44■■□□□ 1.5
COL16A1-206ENST00000461217 ABCA6Q8N139 1617 aa24.43■■□□□ 1.5
COL16A1-206ENST00000461217 TRAPPC8Q9Y2L5 1435 aa24.43■■□□□ 1.5
COL16A1-206ENST00000461217 MLH3Q9UHC1 1453 aa24.42■■□□□ 1.5
COL16A1-206ENST00000461217 ZNF777Q9ULD5 760 aaPredicted RBP24.4■■□□□ 1.5
COL16A1-206ENST00000461217 REREQ9P2R6 1566 aa24.4■■□□□ 1.5
COL16A1-206ENST00000461217 CEBPAP49715 358 aaPredicted RBP24.36■■□□□ 1.49
COL16A1-206ENST00000461217 SAMD9LQ8IVG5 1584 aa24.36■■□□□ 1.49
COL16A1-206ENST00000461217 PREX1Q8TCU6 1659 aa24.35■■□□□ 1.49
COL16A1-206ENST00000461217 SYCP2Q9BX26 1530 aa24.35■■□□□ 1.49
COL16A1-206ENST00000461217 GPATCH8Q9UKJ3 1502 aaKnown RBP24.34■■□□□ 1.49
COL16A1-206ENST00000461217 KIDINS220Q9ULH0 1771 aa24.34■■□□□ 1.49
COL16A1-206ENST00000461217 MTUS2Q5JR59 1369 aa24.33■■□□□ 1.49
COL16A1-206ENST00000461217 FBXO41Q8TF61 875 aa24.33■■□□□ 1.49
COL16A1-206ENST00000461217 ESF1Q9H501 851 aaKnown RBP24.33■■□□□ 1.49
COL16A1-206ENST00000461217 AGLP35573 1532 aa24.32■■□□□ 1.48
COL16A1-206ENST00000461217 CCNB3Q8WWL7 1395 aa24.31■■□□□ 1.48
COL16A1-206ENST00000461217 CFDP1Q9UEE9 299 aaPredicted RBP24.29■■□□□ 1.48
COL16A1-206ENST00000461217 HNRNPMP52272 730 aaKnown RBP eCLIP24.27■■□□□ 1.48
COL16A1-206ENST00000461217 SPAG9O60271 1321 aaKnown RBP24.27■■□□□ 1.48
COL16A1-206ENST00000461217 CEP162Q5TB80 1403 aa24.27■■□□□ 1.48
COL16A1-206ENST00000461217 UHRF1BP1Q6BDS2 1440 aa24.27■■□□□ 1.48
COL16A1-206ENST00000461217 PLEKHH2Q8IVE3 1493 aa24.26■■□□□ 1.47
COL16A1-206ENST00000461217 C3P01024 1663 aa24.25■■□□□ 1.47
COL16A1-206ENST00000461217 EHBP1L1Q8N3D4 1523 aa24.25■■□□□ 1.47
COL16A1-206ENST00000461217 ATP7AQ04656 1500 aa24.24■■□□□ 1.47
COL16A1-206ENST00000461217 KIAA1107Q9UPP5 1409 aa24.23■■□□□ 1.47
COL16A1-206ENST00000461217 TIAM1Q13009 1591 aa24.2■■□□□ 1.47
COL16A1-206ENST00000461217 INO80Q9ULG1 1556 aaPredicted RBP24.2■■□□□ 1.47
COL16A1-206ENST00000461217 CNTLNQ9NXG0 1405 aa24.2■■□□□ 1.46
COL16A1-206ENST00000461217 SUPT6HQ7KZ85 1726 aaKnown RBP24.2■■□□□ 1.46
COL16A1-206ENST00000461217 A2MP01023 1474 aa24.14■■□□□ 1.46
COL16A1-206ENST00000461217 PLXNC1O60486 1568 aa24.13■■□□□ 1.45
COL16A1-206ENST00000461217 SETD1BQ9UPS6 1966 aaKnown RBP24.13■■□□□ 1.45
COL16A1-206ENST00000461217 MROH2AA6NES4 1674 aa24.13■■□□□ 1.45
COL16A1-206ENST00000461217 ZNF644Q9H582 1327 aaPredicted RBP24.12■■□□□ 1.45
COL16A1-206ENST00000461217 STRCQ7RTU9 1775 aa24.12■■□□□ 1.45
COL16A1-206ENST00000461217 CERKQ8TCT0 537 aa24.12■■□□□ 1.45
COL16A1-206ENST00000461217 DMRT2Q9Y5R5 561 aa24.12■■□□□ 1.45
COL16A1-206ENST00000461217 ADGBQ8N7X0 1667 aa24.1■■□□□ 1.45
COL16A1-206ENST00000461217 CLTCQ00610 1675 aaKnown RBP24.09■■□□□ 1.45
COL16A1-206ENST00000461217 NCOA2Q15596 1464 aa24.07■■□□□ 1.44
COL16A1-206ENST00000461217 ZMYM3Q14202 1370 aa24.07■■□□□ 1.44
COL16A1-206ENST00000461217 GGT6Q6P531 493 aa24.07■■□□□ 1.44
COL16A1-206ENST00000461217 MBD5Q9P267 1494 aa24.07■■□□□ 1.44
COL16A1-206ENST00000461217 NPATQ14207 1427 aa24.06■■□□□ 1.44
COL16A1-206ENST00000461217 CAMSAP2Q08AD1 1489 aa24.03■■□□□ 1.44
COL16A1-206ENST00000461217 RTEL1-TNFRSF6BF6WH68 1400 aa24.02■■□□□ 1.44
COL16A1-206ENST00000461217 CCDC141Q6ZP82 1450 aa24.02■■□□□ 1.44
COL16A1-206ENST00000461217 PTPRTO14522 1441 aa24.01■■□□□ 1.43
COL16A1-206ENST00000461217 VPS8Q8N3P4 1428 aa24.01■■□□□ 1.43
COL16A1-206ENST00000461217 LOC105371045A0A1W2PR82 267 aa24■■□□□ 1.43
COL16A1-206ENST00000461217 NCOA1Q15788 1441 aa23.99■■□□□ 1.43
COL16A1-206ENST00000461217 CAMSAP1Q5T5Y3 1602 aa23.99■■□□□ 1.43
COL16A1-206ENST00000461217 MYO3AQ8NEV4 1616 aa23.99■■□□□ 1.43
COL16A1-206ENST00000461217 DHX29Q7Z478 1369 aaKnown RBP23.96■■□□□ 1.43
COL16A1-206ENST00000461217 PPP6R1Q9UPN7 881 aa23.96■■□□□ 1.43
COL16A1-206ENST00000461217 PTPRKQ15262 1439 aa23.95■■□□□ 1.42
COL16A1-206ENST00000461217 LRRC9Q6ZRR7 1453 aa23.94■■□□□ 1.42
COL16A1-206ENST00000461217 RSPH4AQ5TD94 716 aa23.94■■□□□ 1.42
COL16A1-206ENST00000461217 ZNF142P52746 1687 aaPredicted RBP23.94■■□□□ 1.42
COL16A1-206ENST00000461217 CEP170BQ9Y4F5 1589 aaPredicted RBP23.93■■□□□ 1.42
COL16A1-206ENST00000461217 KIF3BO15066 747 aa23.92■■□□□ 1.42
COL16A1-206ENST00000461217 ARHGEF5Q12774 1597 aa23.91■■□□□ 1.42
COL16A1-206ENST00000461217 TSPY4P0CV99 314 aa23.89■■□□□ 1.41
COL16A1-206ENST00000461217 TSPY10P0CW01 314 aa23.89■■□□□ 1.41
COL16A1-206ENST00000461217 KDM5DQ9BY66 1539 aa23.88■■□□□ 1.41
COL16A1-206ENST00000461217 NCKAP5LQ9HCH0 1330 aa23.87■■□□□ 1.41
COL16A1-206ENST00000461217 PLA2R1Q13018 1463 aa23.86■■□□□ 1.41
COL16A1-206ENST00000461217 MAP3K1Q13233 1512 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms