RNA–Protein interactions for RNA: ENST00000461111.1

AGRN-203, Transcript of agrin, humanhuman

TSL 1 (best)

Gene AGRN, Length 3,385 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-203ENST00000461111 FGD5Q6ZNL6 1462 aa16.53■□□□□ 0.24
AGRN-203ENST00000461111 KIF7Q2M1P5 1343 aa16.53■□□□□ 0.24
AGRN-203ENST00000461111 SMG6Q86US8 1419 aaKnown RBP16.53■□□□□ 0.24
AGRN-203ENST00000461111 PTPRKQ15262 1439 aa16.52■□□□□ 0.24
AGRN-203ENST00000461111 FBLN2P98095 1184 aa16.51■□□□□ 0.23
AGRN-203ENST00000461111 AQRO60306 1485 aaKnown RBP eCLIP16.5■□□□□ 0.232e-7■■■■■ 40.7
AGRN-203ENST00000461111 ZNF644Q9H582 1327 aaPredicted RBP16.5■□□□□ 0.23
AGRN-203ENST00000461111 RRP1P56182 461 aaKnown RBP16.49■□□□□ 0.23
AGRN-203ENST00000461111 FRAT2O75474 233 aaPredicted RBP16.48■□□□□ 0.23
AGRN-203ENST00000461111 RCAN3Q9UKA8 241 aa16.48■□□□□ 0.23
AGRN-203ENST00000461111 FMN1Q68DA7 1419 aa16.48■□□□□ 0.23
AGRN-203ENST00000461111 UACAQ9BZF9 1416 aa16.48■□□□□ 0.23
AGRN-203ENST00000461111 DDRGK1Q96HY6 314 aa16.48■□□□□ 0.23
AGRN-203ENST00000461111 PKNOX2Q96KN3 472 aa16.47■□□□□ 0.23
AGRN-203ENST00000461111 RGL3Q3MIN7 710 aa16.47■□□□□ 0.23
AGRN-203ENST00000461111 CADPSQ9ULU8 1353 aa16.46■□□□□ 0.23
AGRN-203ENST00000461111 PRDM2Q13029 1718 aa16.45■□□□□ 0.22
AGRN-203ENST00000461111 CARD11Q9BXL7 1154 aa16.44■□□□□ 0.22
AGRN-203ENST00000461111 PCF11O94913 1555 aaKnown RBP16.43■□□□□ 0.22
AGRN-203ENST00000461111 CFTRP13569 1480 aa16.43■□□□□ 0.22
AGRN-203ENST00000461111 RSPH6AQ9H0K4 717 aa16.43■□□□□ 0.22
AGRN-203ENST00000461111 RNF123Q5XPI4 1314 aa16.43■□□□□ 0.22
AGRN-203ENST00000461111 DCAF11Q8TEB1 546 aa16.43■□□□□ 0.22
AGRN-203ENST00000461111 VSIG10Q8N0Z9 540 aa16.42■□□□□ 0.22
AGRN-203ENST00000461111 NAIPQ13075 1403 aa16.42■□□□□ 0.22
AGRN-203ENST00000461111 PNISRQ8TF01 805 aaKnown RBP16.41■□□□□ 0.22
AGRN-203ENST00000461111 CDCA7LQ96GN5 454 aa16.41■□□□□ 0.22
AGRN-203ENST00000461111 RGS3P49796 1198 aa16.4■□□□□ 0.22
AGRN-203ENST00000461111 CC2D1BQ5T0F9 858 aaKnown RBP16.4■□□□□ 0.22
AGRN-203ENST00000461111 PKD2Q13563 968 aa16.4■□□□□ 0.22
AGRN-203ENST00000461111 MS4A1P11836 297 aa16.39■□□□□ 0.21
AGRN-203ENST00000461111 BIVM-ERCC5R4GMW8 1640 aa16.39■□□□□ 0.21
AGRN-203ENST00000461111 CRBNQ96SW2 442 aa16.39■□□□□ 0.21
AGRN-203ENST00000461111 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.39■□□□□ 0.21
AGRN-203ENST00000461111 NCOA1Q15788 1441 aa16.38■□□□□ 0.21
AGRN-203ENST00000461111 HFM1A2PYH4 1435 aa16.38■□□□□ 0.21
AGRN-203ENST00000461111 NCOA2Q15596 1464 aa16.38■□□□□ 0.21
AGRN-203ENST00000461111 NAP1L5Q96NT1 182 aaPredicted RBP16.37■□□□□ 0.21
AGRN-203ENST00000461111 CASKIN1Q8WXD9 1431 aa16.36■□□□□ 0.21
AGRN-203ENST00000461111 CFDP1Q9UEE9 299 aaPredicted RBP16.36■□□□□ 0.21
AGRN-203ENST00000461111 MYOM3Q5VTT5 1437 aa16.35■□□□□ 0.21
AGRN-203ENST00000461111 ARID4BQ4LE39 1312 aaPredicted RBP16.34■□□□□ 0.21
AGRN-203ENST00000461111 ST20-MTHFSA0A0A6YYL1 179 aa16.34■□□□□ 0.21
AGRN-203ENST00000461111 GLIPR1L2Q4G1C9 344 aa16.34■□□□□ 0.21
AGRN-203ENST00000461111 FAM43AQ8N2R8 423 aa16.34■□□□□ 0.21
AGRN-203ENST00000461111 POGKQ9P215 609 aa16.32■□□□□ 0.2
AGRN-203ENST00000461111 SLKQ9H2G2 1235 aaPredicted RBP16.32■□□□□ 0.2
AGRN-203ENST00000461111 FANCD2Q9BXW9 1451 aa16.31■□□□□ 0.2
AGRN-203ENST00000461111 C20orf194Q5TEA3 1177 aa16.3■□□□□ 0.2
AGRN-203ENST00000461111 KDM5BQ9UGL1 1544 aa16.29■□□□□ 0.2
AGRN-203ENST00000461111 RRAGDQ9NQL2 400 aaPredicted RBP16.29■□□□□ 0.2
AGRN-203ENST00000461111 MAP3K1Q13233 1512 aa16.29■□□□□ 0.2
AGRN-203ENST00000461111 ZMYND15Q9H091 742 aa16.29■□□□□ 0.2
AGRN-203ENST00000461111 NESP48681 1621 aa16.28■□□□□ 0.2
AGRN-203ENST00000461111 FYCO1Q9BQS8 1478 aa16.28■□□□□ 0.2
AGRN-203ENST00000461111 USP47Q96K76 1375 aa16.28■□□□□ 0.2
AGRN-203ENST00000461111 GZF1Q9H116 711 aaPredicted RBP16.27■□□□□ 0.2
AGRN-203ENST00000461111 PTPN23Q9H3S7 1636 aa16.25■□□□□ 0.19
AGRN-203ENST00000461111 SPRYD3Q8NCJ5 442 aa16.25■□□□□ 0.19
AGRN-203ENST00000461111 DHX29Q7Z478 1369 aaKnown RBP16.25■□□□□ 0.19
AGRN-203ENST00000461111 FAM161AQ3B820 660 aa16.23■□□□□ 0.19
AGRN-203ENST00000461111 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.23■□□□□ 0.196e-7■■■■□ 22.9
AGRN-203ENST00000461111 HSP90AA2PQ14568 343 aaPredicted RBP16.23■□□□□ 0.19
AGRN-203ENST00000461111 PNNQ9H307 717 aaKnown RBP16.22■□□□□ 0.19
AGRN-203ENST00000461111 TSPY4P0CV99 314 aa16.2■□□□□ 0.18
AGRN-203ENST00000461111 TSPY10P0CW01 314 aa16.2■□□□□ 0.18
AGRN-203ENST00000461111 POLA1P09884 1462 aaPredicted RBP16.2■□□□□ 0.18
AGRN-203ENST00000461111 HSP90AA1P07900 732 aaKnown RBP16.19■□□□□ 0.18
AGRN-203ENST00000461111 NUP155O75694 1391 aa16.19■□□□□ 0.18
AGRN-203ENST00000461111 MYBBP1AQ9BQG0 1328 aaKnown RBP16.18■□□□□ 0.18
AGRN-203ENST00000461111 SENP3Q9H4L4 574 aaPredicted RBP16.18■□□□□ 0.18
AGRN-203ENST00000461111 C8orf34Q49A92 452 aa16.17■□□□□ 0.18
AGRN-203ENST00000461111 ANKRD30BQ9BXX2 1392 aa16.16■□□□□ 0.18
AGRN-203ENST00000461111 CDK13Q14004 1512 aaKnown RBP16.15■□□□□ 0.18
AGRN-203ENST00000461111 PDS5BQ9NTI5 1447 aa16.15■□□□□ 0.18
AGRN-203ENST00000461111 CANXP27824 592 aaKnown RBP16.15■□□□□ 0.18
AGRN-203ENST00000461111 HNRNPMP52272 730 aaKnown RBP eCLIP16.14■□□□□ 0.175e-6■■■■□ 20.7
AGRN-203ENST00000461111 NEUROD2Q15784 382 aa16.14■□□□□ 0.17
AGRN-203ENST00000461111 WDR43Q15061 677 aaKnown RBP eCLIP16.14■□□□□ 0.17
AGRN-203ENST00000461111 DENND4BO75064 1496 aaPredicted RBP16.14■□□□□ 0.17
AGRN-203ENST00000461111 PDE3BQ13370 1112 aa16.13■□□□□ 0.17
AGRN-203ENST00000461111 NBPF1Q3BBV0 1214 aa16.13■□□□□ 0.17
AGRN-203ENST00000461111 CENPQQ7L2Z9 268 aaPredicted RBP16.13■□□□□ 0.17
AGRN-203ENST00000461111 PANK2Q9BZ23 570 aa16.13■□□□□ 0.17
AGRN-203ENST00000461111 KIF15Q9NS87 1388 aa16.13■□□□□ 0.17
AGRN-203ENST00000461111 RALBP1Q15311 655 aa16.13■□□□□ 0.17
AGRN-203ENST00000461111 SPATA31E1Q6ZUB1 1445 aa16.13■□□□□ 0.17
AGRN-203ENST00000461111 L1TD1Q5T7N2 865 aaKnown RBP16.12■□□□□ 0.17
AGRN-203ENST00000461111 CCDC146Q8IYE0 955 aa16.12■□□□□ 0.17
AGRN-203ENST00000461111 NLRP13Q86W25 1043 aa16.12■□□□□ 0.17
AGRN-203ENST00000461111 ROCK2O75116 1388 aaKnown RBP16.12■□□□□ 0.17
AGRN-203ENST00000461111 GAPVD1Q14C86 1478 aa16.11■□□□□ 0.17
AGRN-203ENST00000461111 PANK3Q9H999 370 aa16.11■□□□□ 0.17
AGRN-203ENST00000461111 KTN1Q86UP2 1357 aaKnown RBP16.11■□□□□ 0.17
AGRN-203ENST00000461111 CHMP7Q8WUX9 453 aaPredicted RBP16.1■□□□□ 0.17
AGRN-203ENST00000461111 LAMC3Q9Y6N6 1575 aa16.1■□□□□ 0.17
AGRN-203ENST00000461111 TOPBP1Q92547 1522 aa16.1■□□□□ 0.17
AGRN-203ENST00000461111 GOLGA6L3A6NEY3 463 aa16.09■□□□□ 0.17
AGRN-203ENST00000461111 TNNT2P45379 298 aaPredicted RBP16.09■□□□□ 0.17
AGRN-203ENST00000461111 BRD4O60885 1362 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms