RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 ARHGAP5Q13017 1502 aa21.09■□□□□ 0.97
RAB11FIP3-207ENST00000461009 POGZQ7Z3K3 1410 aa21.08■□□□□ 0.97
RAB11FIP3-207ENST00000461009 ARHGEF40Q8TER5 1519 aa21.08■□□□□ 0.96
RAB11FIP3-207ENST00000461009 LRRIQ1Q96JM4 1722 aa21.07■□□□□ 0.96
RAB11FIP3-207ENST00000461009 ZMYM4Q5VZL5 1548 aa21.07■□□□□ 0.96
RAB11FIP3-207ENST00000461009 ZFYVE16Q7Z3T8 1539 aa21.07■□□□□ 0.96
RAB11FIP3-207ENST00000461009 MYT1LQ9UL68 1186 aa21.06■□□□□ 0.96
RAB11FIP3-207ENST00000461009 ADAMTSL3P82987 1691 aa21.02■□□□□ 0.96
RAB11FIP3-207ENST00000461009 BCORL1Q5H9F3 1711 aa21.02■□□□□ 0.96
RAB11FIP3-207ENST00000461009 ZNF518AQ6AHZ1 1483 aa21.01■□□□□ 0.95
RAB11FIP3-207ENST00000461009 PTPRMP28827 1452 aa21.01■□□□□ 0.95
RAB11FIP3-207ENST00000461009 YEATS2Q9ULM3 1422 aa21■□□□□ 0.95
RAB11FIP3-207ENST00000461009 HECW2Q9P2P5 1572 aa20.98■□□□□ 0.95
RAB11FIP3-207ENST00000461009 AFAP1Q8N556 730 aa20.98■□□□□ 0.95
RAB11FIP3-207ENST00000461009 ATP10AO60312 1499 aa20.98■□□□□ 0.95
RAB11FIP3-207ENST00000461009 CDC42BPBQ9Y5S2 1711 aa20.96■□□□□ 0.95
RAB11FIP3-207ENST00000461009 PREX2Q70Z35 1606 aa20.96■□□□□ 0.95
RAB11FIP3-207ENST00000461009 MTUS2Q5JR59 1369 aa20.96■□□□□ 0.95
RAB11FIP3-207ENST00000461009 MLECQ14165 292 aa20.95■□□□□ 0.94
RAB11FIP3-207ENST00000461009 MADDQ8WXG6 1647 aa20.95■□□□□ 0.94
RAB11FIP3-207ENST00000461009 C9orf84Q5VXU9 1444 aa20.95■□□□□ 0.94
RAB11FIP3-207ENST00000461009 ZNF777Q9ULD5 760 aaPredicted RBP20.94■□□□□ 0.94
RAB11FIP3-207ENST00000461009 CCNB3Q8WWL7 1395 aa20.91■□□□□ 0.94
RAB11FIP3-207ENST00000461009 CFDP1Q9UEE9 299 aaPredicted RBP20.91■□□□□ 0.94
RAB11FIP3-207ENST00000461009 KDM5CP41229 1560 aa20.9■□□□□ 0.94
RAB11FIP3-207ENST00000461009 CDC42BPAQ5VT25 1732 aa20.9■□□□□ 0.94
RAB11FIP3-207ENST00000461009 VPS8Q8N3P4 1428 aa20.89■□□□□ 0.94
RAB11FIP3-207ENST00000461009 PLPPR3Q6T4P5 718 aa20.89■□□□□ 0.93
RAB11FIP3-207ENST00000461009 RIMS1Q86UR5 1692 aaKnown RBP20.89■□□□□ 0.93
RAB11FIP3-207ENST00000461009 ABCC1P33527 1531 aa20.88■□□□□ 0.93
RAB11FIP3-207ENST00000461009 GPATCH8Q9UKJ3 1502 aaKnown RBP20.88■□□□□ 0.93
RAB11FIP3-207ENST00000461009 MLH3Q9UHC1 1453 aa20.88■□□□□ 0.93
RAB11FIP3-207ENST00000461009 TRAPPC8Q9Y2L5 1435 aa20.86■□□□□ 0.93
RAB11FIP3-207ENST00000461009 PLEKHH2Q8IVE3 1493 aa20.85■□□□□ 0.93
RAB11FIP3-207ENST00000461009 ITSN2Q9NZM3 1697 aa20.85■□□□□ 0.93
RAB11FIP3-207ENST00000461009 ESF1Q9H501 851 aaKnown RBP20.84■□□□□ 0.93
RAB11FIP3-207ENST00000461009 ARHGEF12Q9NZN5 1544 aa20.83■□□□□ 0.93
RAB11FIP3-207ENST00000461009 EHBP1L1Q8N3D4 1523 aa20.83■□□□□ 0.92
RAB11FIP3-207ENST00000461009 FER1L4A9Z1Z3 1794 aa20.82■□□□□ 0.92
RAB11FIP3-207ENST00000461009 SIGLEC1Q9BZZ2 1709 aa20.82■□□□□ 0.92
RAB11FIP3-207ENST00000461009 HNRNPMP52272 730 aaKnown RBP eCLIP20.82■□□□□ 0.92
RAB11FIP3-207ENST00000461009 SPAG9O60271 1321 aaKnown RBP20.81■□□□□ 0.92
RAB11FIP3-207ENST00000461009 KIAA1107Q9UPP5 1409 aa20.81■□□□□ 0.92
RAB11FIP3-207ENST00000461009 DIP2CQ9Y2E4 1556 aa20.8■□□□□ 0.92
RAB11FIP3-207ENST00000461009 APLP2Q06481 763 aa20.8■□□□□ 0.92
RAB11FIP3-207ENST00000461009 SAMD9LQ8IVG5 1584 aa20.8■□□□□ 0.92
RAB11FIP3-207ENST00000461009 REREQ9P2R6 1566 aa20.8■□□□□ 0.92
RAB11FIP3-207ENST00000461009 SYCP2Q9BX26 1530 aa20.78■□□□□ 0.92
RAB11FIP3-207ENST00000461009 ABCA6Q8N139 1617 aa20.77■□□□□ 0.92
RAB11FIP3-207ENST00000461009 AGLP35573 1532 aa20.75■□□□□ 0.91
RAB11FIP3-207ENST00000461009 KIDINS220Q9ULH0 1771 aa20.74■□□□□ 0.91
RAB11FIP3-207ENST00000461009 LMTK3Q96Q04 1460 aa20.74■□□□□ 0.91
RAB11FIP3-207ENST00000461009 TIAM1Q13009 1591 aa20.72■□□□□ 0.91
RAB11FIP3-207ENST00000461009 SUPT6HQ7KZ85 1726 aaKnown RBP20.72■□□□□ 0.91
RAB11FIP3-207ENST00000461009 MAP3K1Q13233 1512 aa20.72■□□□□ 0.91
RAB11FIP3-207ENST00000461009 CEBPAP49715 358 aaPredicted RBP20.71■□□□□ 0.91
RAB11FIP3-207ENST00000461009 RSPH4AQ5TD94 716 aa20.7■□□□□ 0.9
RAB11FIP3-207ENST00000461009 ATP7AQ04656 1500 aa20.69■□□□□ 0.9
RAB11FIP3-207ENST00000461009 ZNF644Q9H582 1327 aaPredicted RBP20.69■□□□□ 0.9
RAB11FIP3-207ENST00000461009 CNTLNQ9NXG0 1405 aa20.69■□□□□ 0.9
RAB11FIP3-207ENST00000461009 NCOA2Q15596 1464 aa20.69■□□□□ 0.9
RAB11FIP3-207ENST00000461009 HSPA2P54652 639 aa20.68■□□□□ 0.9
RAB11FIP3-207ENST00000461009 A2MP01023 1474 aa20.65■□□□□ 0.9
RAB11FIP3-207ENST00000461009 LRRC9Q6ZRR7 1453 aa20.65■□□□□ 0.9
RAB11FIP3-207ENST00000461009 ILDR1Q86SU0 546 aaPredicted RBP20.65■□□□□ 0.9
RAB11FIP3-207ENST00000461009 INO80Q9ULG1 1556 aaPredicted RBP20.63■□□□□ 0.89
RAB11FIP3-207ENST00000461009 RTEL1-TNFRSF6BF6WH68 1400 aa20.63■□□□□ 0.89
RAB11FIP3-207ENST00000461009 PREX1Q8TCU6 1659 aa20.63■□□□□ 0.89
RAB11FIP3-207ENST00000461009 SETD1BQ9UPS6 1966 aaKnown RBP20.63■□□□□ 0.89
RAB11FIP3-207ENST00000461009 MBD5Q9P267 1494 aa20.62■□□□□ 0.89
RAB11FIP3-207ENST00000461009 UHRF1BP1Q6BDS2 1440 aa20.62■□□□□ 0.89
RAB11FIP3-207ENST00000461009 TSPY4P0CV99 314 aa20.62■□□□□ 0.89
RAB11FIP3-207ENST00000461009 TSPY10P0CW01 314 aa20.62■□□□□ 0.89
RAB11FIP3-207ENST00000461009 KANK4Q5T7N3 995 aaPredicted RBP20.61■□□□□ 0.89
RAB11FIP3-207ENST00000461009 GGT6Q6P531 493 aa20.61■□□□□ 0.89
RAB11FIP3-207ENST00000461009 PPP6R1Q9UPN7 881 aa20.61■□□□□ 0.89
RAB11FIP3-207ENST00000461009 CAMSAP2Q08AD1 1489 aa20.6■□□□□ 0.89
RAB11FIP3-207ENST00000461009 CCDC141Q6ZP82 1450 aa20.6■□□□□ 0.89
RAB11FIP3-207ENST00000461009 ADGBQ8N7X0 1667 aa20.6■□□□□ 0.89
RAB11FIP3-207ENST00000461009 DMRT2Q9Y5R5 561 aa20.59■□□□□ 0.89
RAB11FIP3-207ENST00000461009 C3P01024 1663 aa20.58■□□□□ 0.89
RAB11FIP3-207ENST00000461009 PLXNC1O60486 1568 aa20.57■□□□□ 0.88
RAB11FIP3-207ENST00000461009 ZMYM3Q14202 1370 aa20.57■□□□□ 0.88
RAB11FIP3-207ENST00000461009 DHX29Q7Z478 1369 aaKnown RBP20.56■□□□□ 0.88
RAB11FIP3-207ENST00000461009 MROH2AA6NES4 1674 aa20.54■□□□□ 0.88
RAB11FIP3-207ENST00000461009 NPATQ14207 1427 aa20.53■□□□□ 0.88
RAB11FIP3-207ENST00000461009 MIA2Q96PC5 1412 aa20.52■□□□□ 0.87
RAB11FIP3-207ENST00000461009 ARHGEF5Q12774 1597 aa20.51■□□□□ 0.87
RAB11FIP3-207ENST00000461009 KIF3BO15066 747 aa20.51■□□□□ 0.87
RAB11FIP3-207ENST00000461009 FBXO41Q8TF61 875 aa20.51■□□□□ 0.87
RAB11FIP3-207ENST00000461009 MYOM3Q5VTT5 1437 aa20.51■□□□□ 0.87
RAB11FIP3-207ENST00000461009 CLTCQ00610 1675 aaKnown RBP20.49■□□□□ 0.87
RAB11FIP3-207ENST00000461009 WASHC2CQ9Y4E1 1318 aa20.45■□□□□ 0.86
RAB11FIP3-207ENST00000461009 PTPRKQ15262 1439 aa20.42■□□□□ 0.86
RAB11FIP3-207ENST00000461009 CERKQ8TCT0 537 aa20.41■□□□□ 0.86
RAB11FIP3-207ENST00000461009 FAM135AQ9P2D6 1515 aa20.41■□□□□ 0.86
RAB11FIP3-207ENST00000461009 MAST1Q9Y2H9 1570 aa20.4■□□□□ 0.86
RAB11FIP3-207ENST00000461009 STRCQ7RTU9 1775 aa20.39■□□□□ 0.86
RAB11FIP3-207ENST00000461009 PTPRTO14522 1441 aa20.39■□□□□ 0.85
RAB11FIP3-207ENST00000461009 KDM5DQ9BY66 1539 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms