RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 NISCHQ9Y2I1 1504 aa32.22■■■□□ 2.75
RAB11FIP3-207ENST00000461009 CCDC180Q9P1Z9 1646 aa28.82■■■□□ 2.2
RAB11FIP3-207ENST00000461009 ABCC9O60706 1549 aa28.59■■■□□ 2.17
RAB11FIP3-207ENST00000461009 RB1CC1Q8TDY2 1594 aa27.36■■□□□ 1.97
RAB11FIP3-207ENST00000461009 DCAF8L2P0C7V8 631 aa27.26■■□□□ 1.95
RAB11FIP3-207ENST00000461009 NACADO15069 1562 aa27.23■■□□□ 1.95
RAB11FIP3-207ENST00000461009 MYO15BQ96JP2 1530 aa26.92■■□□□ 1.9
RAB11FIP3-207ENST00000461009 ZCCHC6Q5VYS8 1495 aaKnown RBP26.73■■□□□ 1.87
RAB11FIP3-207ENST00000461009 PABPN1Q86U42 306 aaKnown RBP eCLIP26.69■■□□□ 1.86
RAB11FIP3-207ENST00000461009 DCAF1Q9Y4B6 1507 aa26.65■■□□□ 1.86
RAB11FIP3-207ENST00000461009 UNC13AQ9UPW8 1703 aa26.61■■□□□ 1.85
RAB11FIP3-207ENST00000461009 DNAJC5BQ9UF47 199 aa26.55■■□□□ 1.84
RAB11FIP3-207ENST00000461009 BICRAQ9NZM4 1560 aa26.43■■□□□ 1.82
RAB11FIP3-207ENST00000461009 SCRIBQ14160 1630 aa26.26■■□□□ 1.79
RAB11FIP3-207ENST00000461009 SHROOM4Q9ULL8 1493 aa26.23■■□□□ 1.79
RAB11FIP3-207ENST00000461009 EIF4G1Q04637 1599 aaKnown RBP25.83■■□□□ 1.73
RAB11FIP3-207ENST00000461009 CC2D2AQ9P2K1 1620 aa25.82■■□□□ 1.72
RAB11FIP3-207ENST00000461009 CECR2Q9BXF3 1484 aa25.76■■□□□ 1.71
RAB11FIP3-207ENST00000461009 NCAPD3P42695 1498 aa25.12■■□□□ 1.61
RAB11FIP3-207ENST00000461009 SMARCA4P51532 1647 aa25.07■■□□□ 1.6
RAB11FIP3-207ENST00000461009 SMARCA2P51531 1590 aa25.05■■□□□ 1.6
RAB11FIP3-207ENST00000461009 ATAD2BQ9ULI0 1458 aa25.05■■□□□ 1.6
RAB11FIP3-207ENST00000461009 BAZ1AQ9NRL2 1556 aaPredicted RBP25.04■■□□□ 1.6
RAB11FIP3-207ENST00000461009 HMGXB3Q12766 1538 aa24.94■■□□□ 1.58
RAB11FIP3-207ENST00000461009 BAZ1BQ9UIG0 1483 aaKnown RBP24.87■■□□□ 1.57
RAB11FIP3-207ENST00000461009 PEG3Q9GZU2 1588 aa24.82■■□□□ 1.56
RAB11FIP3-207ENST00000461009 MROH2BQ7Z745 1585 aa24.8■■□□□ 1.56
RAB11FIP3-207ENST00000461009 ERCC6Q03468 1493 aa24.76■■□□□ 1.55
RAB11FIP3-207ENST00000461009 CUX2O14529 1486 aa24.59■■□□□ 1.53
RAB11FIP3-207ENST00000461009 NESP48681 1621 aa24.58■■□□□ 1.53
RAB11FIP3-207ENST00000461009 LAMC3Q9Y6N6 1575 aa24.53■■□□□ 1.52
RAB11FIP3-207ENST00000461009 WIZO95785 1651 aa24.51■■□□□ 1.51
RAB11FIP3-207ENST00000461009 PDS5BQ9NTI5 1447 aa24.44■■□□□ 1.5
RAB11FIP3-207ENST00000461009 RSF1Q96T23 1441 aaPredicted RBP24.4■■□□□ 1.5
RAB11FIP3-207ENST00000461009 CADPSQ9ULU8 1353 aa24.4■■□□□ 1.5
RAB11FIP3-207ENST00000461009 DNAJC5Q9H3Z4 198 aa24.32■■□□□ 1.48
RAB11FIP3-207ENST00000461009 KIF21AQ7Z4S6 1674 aa24.27■■□□□ 1.48
RAB11FIP3-207ENST00000461009 THOC2Q8NI27 1593 aaKnown RBP24.27■■□□□ 1.48
RAB11FIP3-207ENST00000461009 TOP2AP11388 1531 aaKnown RBP24.25■■□□□ 1.47
RAB11FIP3-207ENST00000461009 MRC2Q9UBG0 1479 aa24.15■■□□□ 1.46
RAB11FIP3-207ENST00000461009 CFTRP13569 1480 aa24.13■■□□□ 1.45
RAB11FIP3-207ENST00000461009 CEP164Q9UPV0 1460 aa24.12■■□□□ 1.45
RAB11FIP3-207ENST00000461009 FANCD2Q9BXW9 1451 aa24.1■■□□□ 1.45
RAB11FIP3-207ENST00000461009 WDR62O43379 1518 aa24.05■■□□□ 1.44
RAB11FIP3-207ENST00000461009 CCDC88BA6NC98 1476 aa23.98■■□□□ 1.43
RAB11FIP3-207ENST00000461009 PRDM2Q13029 1718 aa23.88■■□□□ 1.41
RAB11FIP3-207ENST00000461009 URB2Q14146 1524 aaKnown RBP23.82■■□□□ 1.4
RAB11FIP3-207ENST00000461009 ABCC8Q09428 1581 aa23.72■■□□□ 1.39
RAB11FIP3-207ENST00000461009 SUPT5HO00267 1087 aaKnown RBP23.71■■□□□ 1.39
RAB11FIP3-207ENST00000461009 TOPBP1Q92547 1522 aa23.64■■□□□ 1.38
RAB11FIP3-207ENST00000461009 IFT140Q96RY7 1462 aa23.64■■□□□ 1.38
RAB11FIP3-207ENST00000461009 OSCARQ8IYS5 282 aa23.59■■□□□ 1.37
RAB11FIP3-207ENST00000461009 DNMBPQ6XZF7 1577 aa23.59■■□□□ 1.37
RAB11FIP3-207ENST00000461009 ZNF608Q9ULD9 1512 aaPredicted RBP23.49■■□□□ 1.35
RAB11FIP3-207ENST00000461009 POLA1P09884 1462 aaPredicted RBP23.41■■□□□ 1.34
RAB11FIP3-207ENST00000461009 TRIM41Q8WV44 630 aa23.39■■□□□ 1.33
RAB11FIP3-207ENST00000461009 SOGA1O94964 1423 aa23.38■■□□□ 1.33
RAB11FIP3-207ENST00000461009 EIF4G3O43432 1585 aaKnown RBP23.38■■□□□ 1.33
RAB11FIP3-207ENST00000461009 TARBP1Q13395 1621 aaKnown RBP23.37■■□□□ 1.33
RAB11FIP3-207ENST00000461009 AQRO60306 1485 aaKnown RBP eCLIP23.35■■□□□ 1.33
RAB11FIP3-207ENST00000461009 RAD54L2Q9Y4B4 1467 aa23.31■■□□□ 1.32
RAB11FIP3-207ENST00000461009 FGD5Q6ZNL6 1462 aa23.3■■□□□ 1.32
RAB11FIP3-207ENST00000461009 CUX1P39880 1505 aa23.29■■□□□ 1.32
RAB11FIP3-207ENST00000461009 FBLN2P98095 1184 aa23.27■■□□□ 1.32
RAB11FIP3-207ENST00000461009 TDRD9Q8NDG6 1382 aaKnown RBP23.27■■□□□ 1.31
RAB11FIP3-207ENST00000461009 WDR97A6NE52 1622 aa23.24■■□□□ 1.31
RAB11FIP3-207ENST00000461009 CHD1O14646 1710 aa23.16■■□□□ 1.3
RAB11FIP3-207ENST00000461009 CHMP7Q8WUX9 453 aaPredicted RBP23.14■■□□□ 1.29
RAB11FIP3-207ENST00000461009 GRIN2BQ13224 1484 aa23.13■■□□□ 1.29
RAB11FIP3-207ENST00000461009 SNAPC4Q5SXM2 1469 aa23.12■■□□□ 1.29
RAB11FIP3-207ENST00000461009 RIMBP3CA6NJZ7 1639 aa23.11■■□□□ 1.29
RAB11FIP3-207ENST00000461009 RIMBP3BA6NNM3 1639 aa23.11■■□□□ 1.29
RAB11FIP3-207ENST00000461009 RIMBP3Q9UFD9 1639 aa23.11■■□□□ 1.29
RAB11FIP3-207ENST00000461009 MAGI1Q96QZ7 1491 aaPredicted RBP23.11■■□□□ 1.29
RAB11FIP3-207ENST00000461009 WRNQ14191 1432 aaPredicted RBP eCLIP23.08■■□□□ 1.29
RAB11FIP3-207ENST00000461009 ARHGEF11O15085 1522 aa23.08■■□□□ 1.29
RAB11FIP3-207ENST00000461009 GAPVD1Q14C86 1478 aa23.08■■□□□ 1.29
RAB11FIP3-207ENST00000461009 ABCA10Q8WWZ4 1543 aa23.07■■□□□ 1.28
RAB11FIP3-207ENST00000461009 SYNJ2O15056 1496 aa23.02■■□□□ 1.28
RAB11FIP3-207ENST00000461009 TOP2BQ02880 1626 aa23■■□□□ 1.27
RAB11FIP3-207ENST00000461009 SYNJ1O43426 1573 aa23■■□□□ 1.27
RAB11FIP3-207ENST00000461009 PBRM1Q86U86 1689 aa23■■□□□ 1.27
RAB11FIP3-207ENST00000461009 CYB5RLQ6IPT4 315 aa22.99■■□□□ 1.27
RAB11FIP3-207ENST00000461009 BIVM-ERCC5R4GMW8 1640 aa22.99■■□□□ 1.27
RAB11FIP3-207ENST00000461009 ABCA5Q8WWZ7 1642 aa22.96■■□□□ 1.27
RAB11FIP3-207ENST00000461009 CLASP1Q7Z460 1538 aa22.89■■□□□ 1.26
RAB11FIP3-207ENST00000461009 ARAP1Q96P48 1450 aa22.85■■□□□ 1.25
RAB11FIP3-207ENST00000461009 FHAD1B1AJZ9 1412 aa22.81■■□□□ 1.24
RAB11FIP3-207ENST00000461009 GRIN2AQ12879 1464 aa22.8■■□□□ 1.24
RAB11FIP3-207ENST00000461009 ERICH3Q5RHP9 1530 aa22.8■■□□□ 1.24
RAB11FIP3-207ENST00000461009 ADAMTS12P58397 1594 aa22.78■■□□□ 1.24
RAB11FIP3-207ENST00000461009 TRHP20396 242 aaPredicted RBP22.72■■□□□ 1.23
RAB11FIP3-207ENST00000461009 NUP160Q12769 1436 aa22.7■■□□□ 1.22
RAB11FIP3-207ENST00000461009 CEP170Q5SW79 1584 aa22.66■■□□□ 1.22
RAB11FIP3-207ENST00000461009 KIF27Q86VH2 1401 aa22.65■■□□□ 1.22
RAB11FIP3-207ENST00000461009 IGF1RP08069 1367 aa22.56■■□□□ 1.2
RAB11FIP3-207ENST00000461009 JPH4Q96JJ6 628 aa22.56■■□□□ 1.2
RAB11FIP3-207ENST00000461009 SHROOM2Q13796 1616 aa22.54■■□□□ 1.2
RAB11FIP3-207ENST00000461009 CUL7Q14999 1698 aa22.52■■□□□ 1.2
RAB11FIP3-207ENST00000461009 ERCC6L2Q5T890 1561 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms