RNA–Protein interactions for RNA: ENST00000460945.5

APTX-210, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-210ENST00000460945 ARHGAP5Q13017 1502 aa26.65■■□□□ 1.86
APTX-210ENST00000460945 ARHGEF40Q8TER5 1519 aa26.65■■□□□ 1.86
APTX-210ENST00000460945 ZMYM4Q5VZL5 1548 aa26.64■■□□□ 1.85
APTX-210ENST00000460945 CDC42BPAQ5VT25 1732 aa26.62■■□□□ 1.85
APTX-210ENST00000460945 POGZQ7Z3K3 1410 aa26.61■■□□□ 1.85
APTX-210ENST00000460945 PREX2Q70Z35 1606 aa26.61■■□□□ 1.85
APTX-210ENST00000460945 ADAMTSL3P82987 1691 aa26.59■■□□□ 1.85
APTX-210ENST00000460945 ZFYVE16Q7Z3T8 1539 aa26.59■■□□□ 1.85
APTX-210ENST00000460945 YEATS2Q9ULM3 1422 aa26.58■■□□□ 1.85
APTX-210ENST00000460945 BCORL1Q5H9F3 1711 aa26.58■■□□□ 1.85
APTX-210ENST00000460945 SIGLEC1Q9BZZ2 1709 aa26.57■■□□□ 1.84
APTX-210ENST00000460945 ARID4BQ4LE39 1312 aaPredicted RBP26.56■■□□□ 1.84
APTX-210ENST00000460945 MAGI2Q86UL8 1455 aa26.53■■□□□ 1.84
APTX-210ENST00000460945 AFAP1Q8N556 730 aa26.5■■□□□ 1.83
APTX-210ENST00000460945 MADDQ8WXG6 1647 aa26.5■■□□□ 1.83
APTX-210ENST00000460945 ITSN2Q9NZM3 1697 aa26.49■■□□□ 1.83
APTX-210ENST00000460945 ABCC1P33527 1531 aa26.49■■□□□ 1.83
APTX-210ENST00000460945 ARHGEF12Q9NZN5 1544 aa26.49■■□□□ 1.83
APTX-210ENST00000460945 ZNF518AQ6AHZ1 1483 aa26.49■■□□□ 1.83
APTX-210ENST00000460945 KDM5CP41229 1560 aa26.47■■□□□ 1.83
APTX-210ENST00000460945 MTUS2Q5JR59 1369 aa26.46■■□□□ 1.83
APTX-210ENST00000460945 GPATCH8Q9UKJ3 1502 aaKnown RBP26.45■■□□□ 1.83
APTX-210ENST00000460945 PTPRMP28827 1452 aa26.44■■□□□ 1.82
APTX-210ENST00000460945 SAMD9LQ8IVG5 1584 aa26.43■■□□□ 1.82
APTX-210ENST00000460945 TRAPPC8Q9Y2L5 1435 aa26.43■■□□□ 1.82
APTX-210ENST00000460945 ZNF777Q9ULD5 760 aaPredicted RBP26.43■■□□□ 1.82
APTX-210ENST00000460945 RIMS1Q86UR5 1692 aaKnown RBP26.43■■□□□ 1.82
APTX-210ENST00000460945 ATP10AO60312 1499 aa26.42■■□□□ 1.82
APTX-210ENST00000460945 HECW2Q9P2P5 1572 aa26.42■■□□□ 1.82
APTX-210ENST00000460945 EHBP1L1Q8N3D4 1523 aa26.4■■□□□ 1.82
APTX-210ENST00000460945 C9orf84Q5VXU9 1444 aa26.39■■□□□ 1.82
APTX-210ENST00000460945 MYT1LQ9UL68 1186 aa26.39■■□□□ 1.82
APTX-210ENST00000460945 CCNB3Q8WWL7 1395 aa26.38■■□□□ 1.81
APTX-210ENST00000460945 MLECQ14165 292 aa26.38■■□□□ 1.81
APTX-210ENST00000460945 ABCA6Q8N139 1617 aa26.38■■□□□ 1.81
APTX-210ENST00000460945 DIP2CQ9Y2E4 1556 aa26.37■■□□□ 1.81
APTX-210ENST00000460945 TIAM1Q13009 1591 aa26.37■■□□□ 1.81
APTX-210ENST00000460945 SYCP2Q9BX26 1530 aa26.36■■□□□ 1.81
APTX-210ENST00000460945 MLH3Q9UHC1 1453 aa26.36■■□□□ 1.81
APTX-210ENST00000460945 FER1L4A9Z1Z3 1794 aa26.35■■□□□ 1.81
APTX-210ENST00000460945 KIDINS220Q9ULH0 1771 aa26.35■■□□□ 1.81
APTX-210ENST00000460945 VPS8Q8N3P4 1428 aa26.35■■□□□ 1.81
APTX-210ENST00000460945 CFDP1Q9UEE9 299 aaPredicted RBP26.35■■□□□ 1.81
APTX-210ENST00000460945 HNRNPMP52272 730 aaKnown RBP eCLIP26.33■■□□□ 1.81
APTX-210ENST00000460945 SUPT6HQ7KZ85 1726 aaKnown RBP26.31■■□□□ 1.8
APTX-210ENST00000460945 PLPPR3Q6T4P5 718 aa26.28■■□□□ 1.8
APTX-210ENST00000460945 REREQ9P2R6 1566 aa26.28■■□□□ 1.8
APTX-210ENST00000460945 ZNF644Q9H582 1327 aaPredicted RBP26.27■■□□□ 1.8
APTX-210ENST00000460945 NCOA2Q15596 1464 aa26.27■■□□□ 1.8
APTX-210ENST00000460945 PLEKHH2Q8IVE3 1493 aa26.26■■□□□ 1.79
APTX-210ENST00000460945 KIAA1107Q9UPP5 1409 aa26.26■■□□□ 1.79
APTX-210ENST00000460945 SPAG9O60271 1321 aaKnown RBP26.22■■□□□ 1.79
APTX-210ENST00000460945 LRRC9Q6ZRR7 1453 aa26.21■■□□□ 1.79
APTX-210ENST00000460945 INO80Q9ULG1 1556 aaPredicted RBP26.2■■□□□ 1.78
APTX-210ENST00000460945 ATP7AQ04656 1500 aa26.19■■□□□ 1.78
APTX-210ENST00000460945 AGLP35573 1532 aa26.19■■□□□ 1.78
APTX-210ENST00000460945 KANK4Q5T7N3 995 aaPredicted RBP26.17■■□□□ 1.78
APTX-210ENST00000460945 MBD5Q9P267 1494 aa26.17■■□□□ 1.78
APTX-210ENST00000460945 MAP3K1Q13233 1512 aa26.16■■□□□ 1.78
APTX-210ENST00000460945 LMTK3Q96Q04 1460 aa26.14■■□□□ 1.78
APTX-210ENST00000460945 CEBPAP49715 358 aaPredicted RBP26.13■■□□□ 1.77
APTX-210ENST00000460945 CAMSAP2Q08AD1 1489 aa26.12■■□□□ 1.77
APTX-210ENST00000460945 ADGBQ8N7X0 1667 aa26.09■■□□□ 1.77
APTX-210ENST00000460945 C3P01024 1663 aa26.09■■□□□ 1.77
APTX-210ENST00000460945 PLXNC1O60486 1568 aa26.08■■□□□ 1.77
APTX-210ENST00000460945 A2MP01023 1474 aa26.07■■□□□ 1.76
APTX-210ENST00000460945 CCDC141Q6ZP82 1450 aa26.05■■□□□ 1.76
APTX-210ENST00000460945 HSPA2P54652 639 aa26.04■■□□□ 1.76
APTX-210ENST00000460945 PREX1Q8TCU6 1659 aa26.03■■□□□ 1.76
APTX-210ENST00000460945 SETD1BQ9UPS6 1966 aaKnown RBP26.02■■□□□ 1.76
APTX-210ENST00000460945 ESF1Q9H501 851 aaKnown RBP26.02■■□□□ 1.76
APTX-210ENST00000460945 RTEL1-TNFRSF6BF6WH68 1400 aa26.02■■□□□ 1.76
APTX-210ENST00000460945 APLP2Q06481 763 aa26.01■■□□□ 1.75
APTX-210ENST00000460945 ARHGEF5Q12774 1597 aa26.01■■□□□ 1.75
APTX-210ENST00000460945 CLTCQ00610 1675 aaKnown RBP25.99■■□□□ 1.75
APTX-210ENST00000460945 MYOM3Q5VTT5 1437 aa25.98■■□□□ 1.75
APTX-210ENST00000460945 MROH2AA6NES4 1674 aa25.97■■□□□ 1.75
APTX-210ENST00000460945 RSPH4AQ5TD94 716 aa25.97■■□□□ 1.75
APTX-210ENST00000460945 CNTLNQ9NXG0 1405 aa25.96■■□□□ 1.75
APTX-210ENST00000460945 GGT6Q6P531 493 aa25.95■■□□□ 1.74
APTX-210ENST00000460945 MIA2Q96PC5 1412 aa25.94■■□□□ 1.74
APTX-210ENST00000460945 DHX29Q7Z478 1369 aaKnown RBP25.94■■□□□ 1.74
APTX-210ENST00000460945 TSPY4P0CV99 314 aa25.91■■□□□ 1.74
APTX-210ENST00000460945 TSPY10P0CW01 314 aa25.91■■□□□ 1.74
APTX-210ENST00000460945 ZMYM3Q14202 1370 aa25.9■■□□□ 1.74
APTX-210ENST00000460945 UHRF1BP1Q6BDS2 1440 aa25.89■■□□□ 1.74
APTX-210ENST00000460945 PTPN23Q9H3S7 1636 aa25.88■■□□□ 1.73
APTX-210ENST00000460945 MAST1Q9Y2H9 1570 aa25.88■■□□□ 1.73
APTX-210ENST00000460945 KIF3BO15066 747 aa25.87■■□□□ 1.73
APTX-210ENST00000460945 STRCQ7RTU9 1775 aa25.84■■□□□ 1.73
APTX-210ENST00000460945 PPP6R1Q9UPN7 881 aa25.82■■□□□ 1.72
APTX-210ENST00000460945 CROCC2H7BZ55 1655 aa25.82■■□□□ 1.72
APTX-210ENST00000460945 NPATQ14207 1427 aa25.81■■□□□ 1.72
APTX-210ENST00000460945 ILDR1Q86SU0 546 aaPredicted RBP25.81■■□□□ 1.72
APTX-210ENST00000460945 FGD6Q6ZV73 1430 aa25.8■■□□□ 1.72
APTX-210ENST00000460945 ABCC5O15440 1437 aa25.78■■□□□ 1.72
APTX-210ENST00000460945 PTPRKQ15262 1439 aa25.78■■□□□ 1.72
APTX-210ENST00000460945 DNMT1P26358 1616 aaKnown RBP25.77■■□□□ 1.72
APTX-210ENST00000460945 TCOF1Q13428 1488 aaKnown RBP25.76■■□□□ 1.71
APTX-210ENST00000460945 MYO3AQ8NEV4 1616 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms