RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 MYO5CQ9NQX4 1742 aa35.09■■■■□ 3.21
C9orf3-209ENST00000460573 AKNAQ7Z591 1439 aa35.08■■■■□ 3.21
C9orf3-209ENST00000460573 SUPT6HQ7KZ85 1726 aaKnown RBP35.07■■■■□ 3.2
C9orf3-209ENST00000460573 DENND4BO75064 1496 aaPredicted RBP35.07■■■■□ 3.2
C9orf3-209ENST00000460573 CCNB3Q8WWL7 1395 aa35.04■■■■□ 3.2
C9orf3-209ENST00000460573 EFCAB2Q5VUJ9 269 aa35.04■■■■□ 3.2
C9orf3-209ENST00000460573 NCOA2Q15596 1464 aa35.02■■■■□ 3.2
C9orf3-209ENST00000460573 FRMPD1Q5SYB0 1578 aa35.01■■■■□ 3.2
C9orf3-209ENST00000460573 ARID4BQ4LE39 1312 aaPredicted RBP35.01■■■■□ 3.19
C9orf3-209ENST00000460573 PREX2Q70Z35 1606 aa35■■■■□ 3.19
C9orf3-209ENST00000460573 GPATCH8Q9UKJ3 1502 aaKnown RBP35■■■■□ 3.19
C9orf3-209ENST00000460573 ARHGAP5Q13017 1502 aa34.98■■■■□ 3.19
C9orf3-209ENST00000460573 CDC42BPAQ5VT25 1732 aa34.98■■■■□ 3.19
C9orf3-209ENST00000460573 RICTORQ6R327 1708 aa34.98■■■■□ 3.19
C9orf3-209ENST00000460573 CDC42BPBQ9Y5S2 1711 aa34.96■■■■□ 3.19
C9orf3-209ENST00000460573 CFDP1Q9UEE9 299 aaPredicted RBP34.92■■■■□ 3.18
C9orf3-209ENST00000460573 ITSN2Q9NZM3 1697 aa34.91■■■■□ 3.18
C9orf3-209ENST00000460573 ARHGEF40Q8TER5 1519 aa34.9■■■■□ 3.18
C9orf3-209ENST00000460573 SCAPERQ9BY12 1400 aa34.87■■■■□ 3.17
C9orf3-209ENST00000460573 ZFYVE16Q7Z3T8 1539 aa34.84■■■■□ 3.17
C9orf3-209ENST00000460573 ZMYM4Q5VZL5 1548 aa34.82■■■■□ 3.16
C9orf3-209ENST00000460573 ZNF777Q9ULD5 760 aaPredicted RBP34.81■■■■□ 3.16
C9orf3-209ENST00000460573 BCORL1Q5H9F3 1711 aa34.81■■■■□ 3.16
C9orf3-209ENST00000460573 MYOM3Q5VTT5 1437 aa34.81■■■■□ 3.16
C9orf3-209ENST00000460573 POGZQ7Z3K3 1410 aa34.8■■■■□ 3.16
C9orf3-209ENST00000460573 MYT1LQ9UL68 1186 aa34.79■■■■□ 3.16
C9orf3-209ENST00000460573 ADAMTSL3P82987 1691 aa34.79■■■■□ 3.16
C9orf3-209ENST00000460573 PLEKHH2Q8IVE3 1493 aa34.78■■■■□ 3.16
C9orf3-209ENST00000460573 HECW2Q9P2P5 1572 aa34.78■■■■□ 3.16
C9orf3-209ENST00000460573 MAGI2Q86UL8 1455 aa34.78■■■■□ 3.16
C9orf3-209ENST00000460573 MIA2Q96PC5 1412 aa34.77■■■■□ 3.16
C9orf3-209ENST00000460573 SAMD9LQ8IVG5 1584 aa34.75■■■■□ 3.15
C9orf3-209ENST00000460573 ABCC1P33527 1531 aa34.75■■■■□ 3.15
C9orf3-209ENST00000460573 KIAA1107Q9UPP5 1409 aa34.74■■■■□ 3.15
C9orf3-209ENST00000460573 MADDQ8WXG6 1647 aa34.72■■■■□ 3.15
C9orf3-209ENST00000460573 YEATS2Q9ULM3 1422 aa34.72■■■■□ 3.15
C9orf3-209ENST00000460573 PTPRMP28827 1452 aa34.71■■■■□ 3.15
C9orf3-209ENST00000460573 ZNF518AQ6AHZ1 1483 aa34.69■■■■□ 3.14
C9orf3-209ENST00000460573 ARHGEF12Q9NZN5 1544 aa34.67■■■■□ 3.14
C9orf3-209ENST00000460573 ZNF644Q9H582 1327 aaPredicted RBP34.66■■■■□ 3.14
C9orf3-209ENST00000460573 RIMS1Q86UR5 1692 aaKnown RBP34.66■■■■□ 3.14
C9orf3-209ENST00000460573 CAMSAP2Q08AD1 1489 aa34.65■■■■□ 3.14
C9orf3-209ENST00000460573 PPARGC1BQ86YN6 1023 aaKnown RBP34.65■■■■□ 3.14
C9orf3-209ENST00000460573 SYCP2Q9BX26 1530 aa34.65■■■■□ 3.14
C9orf3-209ENST00000460573 MLECQ14165 292 aa34.64■■■■□ 3.14
C9orf3-209ENST00000460573 HNRNPMP52272 730 aaKnown RBP eCLIP34.63■■■■□ 3.133e-7■■■□□ 18.4
C9orf3-209ENST00000460573 FGD6Q6ZV73 1430 aa34.63■■■■□ 3.13
C9orf3-209ENST00000460573 RSPH4AQ5TD94 716 aa34.62■■■■□ 3.13
C9orf3-209ENST00000460573 PLPPR3Q6T4P5 718 aa34.62■■■■□ 3.13
C9orf3-209ENST00000460573 AFAP1Q8N556 730 aa34.62■■■■□ 3.13
C9orf3-209ENST00000460573 TRAPPC8Q9Y2L5 1435 aa34.61■■■■□ 3.13
C9orf3-209ENST00000460573 ATP10AO60312 1499 aa34.59■■■■□ 3.13
C9orf3-209ENST00000460573 KDM5CP41229 1560 aa34.59■■■■□ 3.13
C9orf3-209ENST00000460573 C9orf84Q5VXU9 1444 aa34.59■■■■□ 3.13
C9orf3-209ENST00000460573 MBD5Q9P267 1494 aa34.58■■■■□ 3.13
C9orf3-209ENST00000460573 PTPN23Q9H3S7 1636 aa34.55■■■■□ 3.12
C9orf3-209ENST00000460573 FER1L4A9Z1Z3 1794 aa34.54■■■■□ 3.12
C9orf3-209ENST00000460573 TCOF1Q13428 1488 aaKnown RBP34.54■■■■□ 3.12
C9orf3-209ENST00000460573 SIGLEC1Q9BZZ2 1709 aa34.54■■■■□ 3.12
C9orf3-209ENST00000460573 MLH3Q9UHC1 1453 aa34.52■■■■□ 3.12
C9orf3-209ENST00000460573 ARHGEF5Q12774 1597 aa34.52■■■■□ 3.12
C9orf3-209ENST00000460573 CCDC141Q6ZP82 1450 aa34.5■■■■□ 3.11
C9orf3-209ENST00000460573 SPAG9O60271 1321 aaKnown RBP34.48■■■■□ 3.11
C9orf3-209ENST00000460573 TSPY4P0CV99 314 aa34.44■■■■□ 3.1
C9orf3-209ENST00000460573 TSPY10P0CW01 314 aa34.44■■■■□ 3.1
C9orf3-209ENST00000460573 DIP2CQ9Y2E4 1556 aa34.43■■■■□ 3.1
C9orf3-209ENST00000460573 RTEL1-TNFRSF6BF6WH68 1400 aa34.42■■■■□ 3.1
C9orf3-209ENST00000460573 FAM50AQ14320 339 aaKnown RBP34.41■■■■□ 3.1
C9orf3-209ENST00000460573 ABCA6Q8N139 1617 aa34.41■■■■□ 3.1
C9orf3-209ENST00000460573 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.38■■■■□ 3.09
C9orf3-209ENST00000460573 INO80Q9ULG1 1556 aaPredicted RBP34.38■■■■□ 3.09
C9orf3-209ENST00000460573 ATP7AQ04656 1500 aa34.38■■■■□ 3.09
C9orf3-209ENST00000460573 KIDINS220Q9ULH0 1771 aa34.38■■■■□ 3.09
C9orf3-209ENST00000460573 ESF1Q9H501 851 aaKnown RBP34.37■■■■□ 3.09
C9orf3-209ENST00000460573 RRBP1Q9P2E9 1410 aaKnown RBP34.36■■■■□ 3.09
C9orf3-209ENST00000460573 DNMT1P26358 1616 aaKnown RBP34.34■■■■□ 3.09
C9orf3-209ENST00000460573 REREQ9P2R6 1566 aa34.33■■■■□ 3.09
C9orf3-209ENST00000460573 ABCC5O15440 1437 aa34.33■■■■□ 3.09
C9orf3-209ENST00000460573 DAPK1P53355 1430 aa34.33■■■■□ 3.09
C9orf3-209ENST00000460573 MAST1Q9Y2H9 1570 aa34.32■■■■□ 3.09
C9orf3-209ENST00000460573 SHANK2Q9UPX8 1470 aa34.31■■■■□ 3.08
C9orf3-209ENST00000460573 LMTK3Q96Q04 1460 aa34.3■■■■□ 3.08
C9orf3-209ENST00000460573 CROCC2H7BZ55 1655 aa34.27■■■■□ 3.08
C9orf3-209ENST00000460573 AGLP35573 1532 aa34.23■■■■□ 3.07
C9orf3-209ENST00000460573 ADGBQ8N7X0 1667 aa34.21■■■■□ 3.07
C9orf3-209ENST00000460573 CEBPAP49715 358 aaPredicted RBP34.2■■■■□ 3.07
C9orf3-209ENST00000460573 A2MP01023 1474 aa34.2■■■■□ 3.06
C9orf3-209ENST00000460573 HSPA2P54652 639 aa34.19■■■■□ 3.06
C9orf3-209ENST00000460573 PLXNC1O60486 1568 aa34.18■■■■□ 3.06
C9orf3-209ENST00000460573 DHX29Q7Z478 1369 aaKnown RBP34.17■■■■□ 3.06
C9orf3-209ENST00000460573 PREX1Q8TCU6 1659 aa34.17■■■■□ 3.06
C9orf3-209ENST00000460573 ANKRD30AQ9BXX3 1397 aa34.15■■■■□ 3.06
C9orf3-209ENST00000460573 ILDR1Q86SU0 546 aaPredicted RBP34.14■■■■□ 3.06
C9orf3-209ENST00000460573 CHIC2Q9UKJ5 165 aa34.14■■■■□ 3.06
C9orf3-209ENST00000460573 ADGRL2O95490 1459 aa34.13■■■■□ 3.05
C9orf3-209ENST00000460573 PTPRKQ15262 1439 aa34.1■■■■□ 3.05
C9orf3-209ENST00000460573 NCOA1Q15788 1441 aa34.1■■■■□ 3.05
C9orf3-209ENST00000460573 CNTLNQ9NXG0 1405 aa34.1■■■■□ 3.05
C9orf3-209ENST00000460573 C3P01024 1663 aa34.09■■■■□ 3.05
C9orf3-209ENST00000460573 UHRF1BP1Q6BDS2 1440 aa34.08■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms