RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 PCF11O94913 1555 aaKnown RBP11.92□□□□□ -0.5
ABCA4-202ENST00000460514 CCDC18Q5T9S5 1454 aa11.91□□□□□ -0.5
ABCA4-202ENST00000460514 NUP153P49790 1475 aaKnown RBP11.9□□□□□ -0.5
ABCA4-202ENST00000460514 ADCY10Q96PN6 1610 aa11.9□□□□□ -0.5
ABCA4-202ENST00000460514 CDK11AQ9UQ88 783 aaPredicted RBP11.89□□□□□ -0.51
ABCA4-202ENST00000460514 KDM5BQ9UGL1 1544 aa11.89□□□□□ -0.51
ABCA4-202ENST00000460514 EPRSP07814 1512 aaKnown RBP11.88□□□□□ -0.51
ABCA4-202ENST00000460514 ATP10BO94823 1461 aa11.86□□□□□ -0.51
ABCA4-202ENST00000460514 ZCCHC11Q5TAX3 1644 aaKnown RBP11.86□□□□□ -0.51
ABCA4-202ENST00000460514 MAP3K1Q13233 1512 aa11.86□□□□□ -0.51
ABCA4-202ENST00000460514 ARID3CA6NKF2 412 aa11.85□□□□□ -0.51
ABCA4-202ENST00000460514 MYCNP04198 464 aaPredicted RBP11.85□□□□□ -0.51
ABCA4-202ENST00000460514 PLEKHD1A6NEE1 506 aa11.84□□□□□ -0.51
ABCA4-202ENST00000460514 CDK13Q14004 1512 aaKnown RBP11.84□□□□□ -0.51
ABCA4-202ENST00000460514 TIAM1Q13009 1591 aa11.83□□□□□ -0.52
ABCA4-202ENST00000460514 CFAP43Q8NDM7 1665 aa11.82□□□□□ -0.52
ABCA4-202ENST00000460514 MAPKBP1O60336 1514 aa11.81□□□□□ -0.52
ABCA4-202ENST00000460514 MTUS2Q5JR59 1369 aa11.81□□□□□ -0.52
ABCA4-202ENST00000460514 LRRIQ1Q96JM4 1722 aa11.81□□□□□ -0.52
ABCA4-202ENST00000460514 ASXL2Q76L83 1435 aa11.8□□□□□ -0.52
ABCA4-202ENST00000460514 FOXD4L1Q9NU39 408 aa11.8□□□□□ -0.52
ABCA4-202ENST00000460514 WDR7Q9Y4E6 1490 aa11.8□□□□□ -0.52
ABCA4-202ENST00000460514 TROQ12816 1431 aaPredicted RBP11.79□□□□□ -0.52
ABCA4-202ENST00000460514 POTEIP0CG38 1075 aa11.79□□□□□ -0.52
ABCA4-202ENST00000460514 EHBP1L1Q8N3D4 1523 aa11.79□□□□□ -0.52
ABCA4-202ENST00000460514 LRRC9Q6ZRR7 1453 aa11.77□□□□□ -0.52
ABCA4-202ENST00000460514 POTEMA6NI47 508 aa11.76□□□□□ -0.53
ABCA4-202ENST00000460514 KIF14Q15058 1648 aa11.75□□□□□ -0.53
ABCA4-202ENST00000460514 ZBTB22O15209 634 aa11.74□□□□□ -0.53
ABCA4-202ENST00000460514 KCNH8Q96L42 1107 aa11.74□□□□□ -0.53
ABCA4-202ENST00000460514 SUPT6HQ7KZ85 1726 aaKnown RBP11.74□□□□□ -0.53
ABCA4-202ENST00000460514 MAGI3Q5TCQ9 1506 aa11.73□□□□□ -0.53
ABCA4-202ENST00000460514 ABCC10Q5T3U5 1492 aa11.72□□□□□ -0.53
ABCA4-202ENST00000460514 KANK4Q5T7N3 995 aaPredicted RBP11.72□□□□□ -0.53
ABCA4-202ENST00000460514 GLI2P10070 1586 aa11.71□□□□□ -0.54
ABCA4-202ENST00000460514 CLEC11AQ9Y240 323 aa11.7□□□□□ -0.54
ABCA4-202ENST00000460514 NCOA2Q15596 1464 aa11.7□□□□□ -0.54
ABCA4-202ENST00000460514 CCNB3Q8WWL7 1395 aa11.69□□□□□ -0.54
ABCA4-202ENST00000460514 FAM69CQ0P6D2 419 aa11.69□□□□□ -0.54
ABCA4-202ENST00000460514 DIP2BQ9P265 1576 aa11.69□□□□□ -0.54
ABCA4-202ENST00000460514 ABCA9Q8IUA7 1624 aa11.68□□□□□ -0.54
ABCA4-202ENST00000460514 POTEGQ6S5H5 508 aa11.68□□□□□ -0.54
ABCA4-202ENST00000460514 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.68□□□□□ -0.54
ABCA4-202ENST00000460514 ITSN2Q9NZM3 1697 aa11.66□□□□□ -0.54
ABCA4-202ENST00000460514 PPARGC1BQ86YN6 1023 aaKnown RBP11.66□□□□□ -0.54
ABCA4-202ENST00000460514 CD109Q6YHK3 1445 aa11.66□□□□□ -0.54
ABCA4-202ENST00000460514 TTC37Q6PGP7 1564 aa11.66□□□□□ -0.54
ABCA4-202ENST00000460514 MYO5CQ9NQX4 1742 aa11.66□□□□□ -0.54
ABCA4-202ENST00000460514 ARAP3Q8WWN8 1544 aa11.65□□□□□ -0.55
ABCA4-202ENST00000460514 MAP3K4Q9Y6R4 1608 aa11.64□□□□□ -0.55
ABCA4-202ENST00000460514 PLCH2O75038 1416 aa11.64□□□□□ -0.55
ABCA4-202ENST00000460514 MYOM3Q5VTT5 1437 aa11.64□□□□□ -0.55
ABCA4-202ENST00000460514 SPDYE1Q8NFV5 336 aaPredicted RBP11.64□□□□□ -0.55
ABCA4-202ENST00000460514 PCDH10Q9P2E7 1040 aa11.64□□□□□ -0.55
ABCA4-202ENST00000460514 KIF13AQ9H1H9 1805 aa11.64□□□□□ -0.55
ABCA4-202ENST00000460514 EFCAB2Q5VUJ9 269 aa11.63□□□□□ -0.55
ABCA4-202ENST00000460514 CFDP1Q9UEE9 299 aaPredicted RBP11.63□□□□□ -0.55
ABCA4-202ENST00000460514 GPATCH8Q9UKJ3 1502 aaKnown RBP11.63□□□□□ -0.55
ABCA4-202ENST00000460514 PREX2Q70Z35 1606 aa11.63□□□□□ -0.55
ABCA4-202ENST00000460514 TEX14Q8IWB6 1497 aa11.63□□□□□ -0.55
ABCA4-202ENST00000460514 CFAP74Q9C0B2 1584 aa11.62□□□□□ -0.55
ABCA4-202ENST00000460514 MIA2Q96PC5 1412 aa11.62□□□□□ -0.55
ABCA4-202ENST00000460514 ARHGAP5Q13017 1502 aa11.62□□□□□ -0.55
ABCA4-202ENST00000460514 CDC42BPAQ5VT25 1732 aa11.62□□□□□ -0.55
ABCA4-202ENST00000460514 PHLDB1Q86UU1 1377 aa11.61□□□□□ -0.55
ABCA4-202ENST00000460514 FANCAO15360 1455 aa11.6□□□□□ -0.55
ABCA4-202ENST00000460514 ATF5Q9Y2D1 282 aaPredicted RBP11.6□□□□□ -0.55
ABCA4-202ENST00000460514 FGD6Q6ZV73 1430 aa11.6□□□□□ -0.55
ABCA4-202ENST00000460514 PLEKHH2Q8IVE3 1493 aa11.59□□□□□ -0.55
ABCA4-202ENST00000460514 NEO1Q92859 1461 aa11.59□□□□□ -0.55
ABCA4-202ENST00000460514 CDC42BPBQ9Y5S2 1711 aa11.59□□□□□ -0.55
ABCA4-202ENST00000460514 TSPOAP1O95153 1857 aa11.58□□□□□ -0.56
ABCA4-202ENST00000460514 ZNF777Q9ULD5 760 aaPredicted RBP11.58□□□□□ -0.56
ABCA4-202ENST00000460514 SPDYE2BA6NHP3 402 aa11.57□□□□□ -0.56
ABCA4-202ENST00000460514 SPDYE6P0CI01 402 aa11.57□□□□□ -0.56
ABCA4-202ENST00000460514 SPDYE2Q495Y8 402 aa11.57□□□□□ -0.56
ABCA4-202ENST00000460514 OTUD5Q96G74 571 aa11.57□□□□□ -0.56
ABCA4-202ENST00000460514 DCBLD2Q96PD2 775 aa11.57□□□□□ -0.56
ABCA4-202ENST00000460514 CLCN6P51797 869 aa11.56□□□□□ -0.56
ABCA4-202ENST00000460514 AKNAQ7Z591 1439 aa11.56□□□□□ -0.56
ABCA4-202ENST00000460514 RRBP1Q9P2E9 1410 aaKnown RBP11.56□□□□□ -0.56
ABCA4-202ENST00000460514 PTPN23Q9H3S7 1636 aa11.56□□□□□ -0.56
ABCA4-202ENST00000460514 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.55□□□□□ -0.56
ABCA4-202ENST00000460514 KIAA1107Q9UPP5 1409 aa11.55□□□□□ -0.56
ABCA4-202ENST00000460514 FAM50AQ14320 339 aaKnown RBP11.55□□□□□ -0.56
ABCA4-202ENST00000460514 RSPH4AQ5TD94 716 aa11.55□□□□□ -0.56
ABCA4-202ENST00000460514 CHADLQ6NUI6 762 aa11.55□□□□□ -0.56
ABCA4-202ENST00000460514 CAMSAP2Q08AD1 1489 aa11.55□□□□□ -0.56
ABCA4-202ENST00000460514 TCOF1Q13428 1488 aaKnown RBP11.55□□□□□ -0.56
ABCA4-202ENST00000460514 PPRC1Q5VV67 1664 aaKnown RBP11.55□□□□□ -0.56
ABCA4-202ENST00000460514 ADGRL1O94910 1474 aa11.54□□□□□ -0.56
ABCA4-202ENST00000460514 SAMD9LQ8IVG5 1584 aa11.54□□□□□ -0.56
ABCA4-202ENST00000460514 ABCC1P33527 1531 aa11.53□□□□□ -0.56
ABCA4-202ENST00000460514 SCAPERQ9BY12 1400 aa11.52□□□□□ -0.57
ABCA4-202ENST00000460514 ZNF644Q9H582 1327 aaPredicted RBP11.51□□□□□ -0.57
ABCA4-202ENST00000460514 DENND4BO75064 1496 aaPredicted RBP11.51□□□□□ -0.57
ABCA4-202ENST00000460514 SYCP2Q9BX26 1530 aa11.5□□□□□ -0.57
ABCA4-202ENST00000460514 ARHGEF5Q12774 1597 aa11.5□□□□□ -0.57
ABCA4-202ENST00000460514 ZNF518AQ6AHZ1 1483 aa11.5□□□□□ -0.57
ABCA4-202ENST00000460514 CCDC141Q6ZP82 1450 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms