RNA–Protein interactions for RNA: ENST00000460390.6

EXD3-202, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 2

Gene EXD3, Length 1,432 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-202ENST00000460390 PLCH2O75038 1416 aa29.79■■■□□ 2.36
EXD3-202ENST00000460390 RAPGEF3O95398 923 aa29.79■■■□□ 2.36
EXD3-202ENST00000460390 CDC42BPAQ5VT25 1732 aa29.75■■■□□ 2.35
EXD3-202ENST00000460390 FANCAO15360 1455 aa29.75■■■□□ 2.35
EXD3-202ENST00000460390 PREX2Q70Z35 1606 aa29.74■■■□□ 2.35
EXD3-202ENST00000460390 FRMPD1Q5SYB0 1578 aa29.74■■■□□ 2.35
EXD3-202ENST00000460390 KANK4Q5T7N3 995 aaPredicted RBP29.73■■■□□ 2.35
EXD3-202ENST00000460390 ADAMTSL3P82987 1691 aa29.73■■■□□ 2.35
EXD3-202ENST00000460390 ARHGAP5Q13017 1502 aa29.72■■■□□ 2.35
EXD3-202ENST00000460390 CDC42BPBQ9Y5S2 1711 aa29.72■■■□□ 2.35
EXD3-202ENST00000460390 CCNB3Q8WWL7 1395 aa29.72■■■□□ 2.35
EXD3-202ENST00000460390 ARID4BQ4LE39 1312 aaPredicted RBP29.71■■■□□ 2.35
EXD3-202ENST00000460390 NCOA2Q15596 1464 aa29.7■■■□□ 2.34
EXD3-202ENST00000460390 EFCAB2Q5VUJ9 269 aa29.7■■■□□ 2.34
EXD3-202ENST00000460390 ITSN2Q9NZM3 1697 aa29.69■■■□□ 2.34
EXD3-202ENST00000460390 PTPRMP28827 1452 aa29.69■■■□□ 2.34
EXD3-202ENST00000460390 BCORL1Q5H9F3 1711 aa29.68■■■□□ 2.34
EXD3-202ENST00000460390 DENND4BO75064 1496 aaPredicted RBP29.68■■■□□ 2.34
EXD3-202ENST00000460390 GPATCH8Q9UKJ3 1502 aaKnown RBP29.68■■■□□ 2.34
EXD3-202ENST00000460390 AKNAQ7Z591 1439 aa29.67■■■□□ 2.34
EXD3-202ENST00000460390 ARHGEF40Q8TER5 1519 aa29.67■■■□□ 2.34
EXD3-202ENST00000460390 RICTORQ6R327 1708 aa29.65■■■□□ 2.34
EXD3-202ENST00000460390 MADDQ8WXG6 1647 aa29.63■■■□□ 2.33
EXD3-202ENST00000460390 CFDP1Q9UEE9 299 aaPredicted RBP29.61■■■□□ 2.33
EXD3-202ENST00000460390 ZNF777Q9ULD5 760 aaPredicted RBP29.54■■■□□ 2.32
EXD3-202ENST00000460390 ZMYM4Q5VZL5 1548 aa29.54■■■□□ 2.32
EXD3-202ENST00000460390 RIMS1Q86UR5 1692 aaKnown RBP29.54■■■□□ 2.32
EXD3-202ENST00000460390 POGZQ7Z3K3 1410 aa29.53■■■□□ 2.32
EXD3-202ENST00000460390 SCAPERQ9BY12 1400 aa29.53■■■□□ 2.32
EXD3-202ENST00000460390 ZFYVE16Q7Z3T8 1539 aa29.53■■■□□ 2.32
EXD3-202ENST00000460390 SAMD9LQ8IVG5 1584 aa29.52■■■□□ 2.32
EXD3-202ENST00000460390 ABCC1P33527 1531 aa29.51■■■□□ 2.31
EXD3-202ENST00000460390 PLEKHH2Q8IVE3 1493 aa29.51■■■□□ 2.31
EXD3-202ENST00000460390 MYOM3Q5VTT5 1437 aa29.5■■■□□ 2.31
EXD3-202ENST00000460390 MAGI2Q86UL8 1455 aa29.47■■■□□ 2.31
EXD3-202ENST00000460390 MIA2Q96PC5 1412 aa29.46■■■□□ 2.31
EXD3-202ENST00000460390 KIAA1107Q9UPP5 1409 aa29.44■■■□□ 2.3
EXD3-202ENST00000460390 ZNF518AQ6AHZ1 1483 aa29.44■■■□□ 2.3
EXD3-202ENST00000460390 SYCP2Q9BX26 1530 aa29.43■■■□□ 2.3
EXD3-202ENST00000460390 LMTK3Q96Q04 1460 aa29.43■■■□□ 2.3
EXD3-202ENST00000460390 YEATS2Q9ULM3 1422 aa29.42■■■□□ 2.3
EXD3-202ENST00000460390 CAMSAP2Q08AD1 1489 aa29.41■■■□□ 2.3
EXD3-202ENST00000460390 ARHGEF12Q9NZN5 1544 aa29.41■■■□□ 2.3
EXD3-202ENST00000460390 PPARGC1BQ86YN6 1023 aaKnown RBP29.4■■■□□ 2.3
EXD3-202ENST00000460390 ZNF644Q9H582 1327 aaPredicted RBP29.39■■■□□ 2.29
EXD3-202ENST00000460390 PLPPR3Q6T4P5 718 aa29.38■■■□□ 2.29
EXD3-202ENST00000460390 FER1L4A9Z1Z3 1794 aa29.38■■■□□ 2.29
EXD3-202ENST00000460390 HNRNPMP52272 730 aaKnown RBP eCLIP29.37■■■□□ 2.29
EXD3-202ENST00000460390 FBXO41Q8TF61 875 aa29.37■■■□□ 2.29
EXD3-202ENST00000460390 KDM5CP41229 1560 aa29.36■■■□□ 2.29
EXD3-202ENST00000460390 FGD6Q6ZV73 1430 aa29.36■■■□□ 2.29
EXD3-202ENST00000460390 SIGLEC1Q9BZZ2 1709 aa29.36■■■□□ 2.29
EXD3-202ENST00000460390 TRAPPC8Q9Y2L5 1435 aa29.36■■■□□ 2.29
EXD3-202ENST00000460390 PTPN23Q9H3S7 1636 aa29.35■■■□□ 2.29
EXD3-202ENST00000460390 AFAP1Q8N556 730 aa29.35■■■□□ 2.29
EXD3-202ENST00000460390 MLECQ14165 292 aa29.34■■■□□ 2.29
EXD3-202ENST00000460390 RSPH4AQ5TD94 716 aa29.31■■■□□ 2.28
EXD3-202ENST00000460390 MBD5Q9P267 1494 aa29.3■■■□□ 2.28
EXD3-202ENST00000460390 C9orf84Q5VXU9 1444 aa29.3■■■□□ 2.28
EXD3-202ENST00000460390 MYT1LQ9UL68 1186 aa29.29■■■□□ 2.28
EXD3-202ENST00000460390 ARHGEF5Q12774 1597 aa29.29■■■□□ 2.28
EXD3-202ENST00000460390 ATP10AO60312 1499 aa29.29■■■□□ 2.28
EXD3-202ENST00000460390 TCOF1Q13428 1488 aaKnown RBP29.27■■■□□ 2.28
EXD3-202ENST00000460390 CCDC141Q6ZP82 1450 aa29.27■■■□□ 2.28
EXD3-202ENST00000460390 MLH3Q9UHC1 1453 aa29.27■■■□□ 2.28
EXD3-202ENST00000460390 SPAG9O60271 1321 aaKnown RBP29.25■■■□□ 2.27
EXD3-202ENST00000460390 HSPA2P54652 639 aa29.23■■■□□ 2.27
EXD3-202ENST00000460390 KIDINS220Q9ULH0 1771 aa29.22■■■□□ 2.27
EXD3-202ENST00000460390 INO80Q9ULG1 1556 aaPredicted RBP29.2■■■□□ 2.26
EXD3-202ENST00000460390 ATP7AQ04656 1500 aa29.2■■■□□ 2.26
EXD3-202ENST00000460390 TSPY4P0CV99 314 aa29.2■■■□□ 2.26
EXD3-202ENST00000460390 TSPY10P0CW01 314 aa29.2■■■□□ 2.26
EXD3-202ENST00000460390 FAM50AQ14320 339 aaKnown RBP29.19■■■□□ 2.26
EXD3-202ENST00000460390 PREX1Q8TCU6 1659 aa29.17■■■□□ 2.26
EXD3-202ENST00000460390 RTEL1-TNFRSF6BF6WH68 1400 aa29.16■■■□□ 2.26
EXD3-202ENST00000460390 DNMT1P26358 1616 aaKnown RBP29.16■■■□□ 2.26
EXD3-202ENST00000460390 ABCA6Q8N139 1617 aa29.16■■■□□ 2.26
EXD3-202ENST00000460390 DIP2CQ9Y2E4 1556 aa29.15■■■□□ 2.26
EXD3-202ENST00000460390 CROCC2H7BZ55 1655 aa29.14■■■□□ 2.26
EXD3-202ENST00000460390 MAST1Q9Y2H9 1570 aa29.12■■■□□ 2.25
EXD3-202ENST00000460390 DAPK1P53355 1430 aa29.12■■■□□ 2.25
EXD3-202ENST00000460390 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.1■■■□□ 2.253e-11■■■■■ 37.1
EXD3-202ENST00000460390 SHANK2Q9UPX8 1470 aa29.1■■■□□ 2.25
EXD3-202ENST00000460390 ABCC5O15440 1437 aa29.1■■■□□ 2.25
EXD3-202ENST00000460390 RRBP1Q9P2E9 1410 aaKnown RBP29.1■■■□□ 2.25
EXD3-202ENST00000460390 ADGBQ8N7X0 1667 aa29.1■■■□□ 2.25
EXD3-202ENST00000460390 REREQ9P2R6 1566 aa29.09■■■□□ 2.25
EXD3-202ENST00000460390 CEBPAP49715 358 aaPredicted RBP29.03■■■□□ 2.24
EXD3-202ENST00000460390 ESF1Q9H501 851 aaKnown RBP29.03■■■□□ 2.24
EXD3-202ENST00000460390 UHRF1BP1Q6BDS2 1440 aa29.03■■■□□ 2.24
EXD3-202ENST00000460390 A2MP01023 1474 aa29.02■■■□□ 2.24
EXD3-202ENST00000460390 PLXNC1O60486 1568 aa29.02■■■□□ 2.24
EXD3-202ENST00000460390 AGLP35573 1532 aa28.98■■■□□ 2.23
EXD3-202ENST00000460390 CERKQ8TCT0 537 aa28.97■■■□□ 2.23
EXD3-202ENST00000460390 SETD1BQ9UPS6 1966 aaKnown RBP28.96■■■□□ 2.23
EXD3-202ENST00000460390 C3P01024 1663 aa28.96■■■□□ 2.23
EXD3-202ENST00000460390 ANKRD30AQ9BXX3 1397 aa28.96■■■□□ 2.23
EXD3-202ENST00000460390 CHIC2Q9UKJ5 165 aa28.95■■■□□ 2.23
EXD3-202ENST00000460390 DHX29Q7Z478 1369 aaKnown RBP28.95■■■□□ 2.22
EXD3-202ENST00000460390 DMRT2Q9Y5R5 561 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms