RNA–Protein interactions for RNA: ENST00000460390.6

EXD3-202, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 2

Gene EXD3, Length 1,432 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-202ENST00000460390 PLCH2O75038 1416 aa29.79■■■□□ 2.36
EXD3-202ENST00000460390 RAPGEF3O95398 923 aa29.79■■■□□ 2.36
EXD3-202ENST00000460390 CDC42BPAQ5VT25 1732 aa29.75■■■□□ 2.35
EXD3-202ENST00000460390 FANCAO15360 1455 aa29.75■■■□□ 2.35
EXD3-202ENST00000460390 PREX2Q70Z35 1606 aa29.74■■■□□ 2.35
EXD3-202ENST00000460390 FRMPD1Q5SYB0 1578 aa29.74■■■□□ 2.35
EXD3-202ENST00000460390 KANK4Q5T7N3 995 aaPredicted RBP29.73■■■□□ 2.35
EXD3-202ENST00000460390 ADAMTSL3P82987 1691 aa29.73■■■□□ 2.35
EXD3-202ENST00000460390 ARHGAP5Q13017 1502 aa29.72■■■□□ 2.35
EXD3-202ENST00000460390 CDC42BPBQ9Y5S2 1711 aa29.72■■■□□ 2.35
EXD3-202ENST00000460390 CCNB3Q8WWL7 1395 aa29.72■■■□□ 2.35
EXD3-202ENST00000460390 ARID4BQ4LE39 1312 aaPredicted RBP29.71■■■□□ 2.35
EXD3-202ENST00000460390 NCOA2Q15596 1464 aa29.7■■■□□ 2.34
EXD3-202ENST00000460390 EFCAB2Q5VUJ9 269 aa29.7■■■□□ 2.34
EXD3-202ENST00000460390 ITSN2Q9NZM3 1697 aa29.69■■■□□ 2.34
EXD3-202ENST00000460390 PTPRMP28827 1452 aa29.69■■■□□ 2.34
EXD3-202ENST00000460390 BCORL1Q5H9F3 1711 aa29.68■■■□□ 2.34
EXD3-202ENST00000460390 DENND4BO75064 1496 aaPredicted RBP29.68■■■□□ 2.34
EXD3-202ENST00000460390 GPATCH8Q9UKJ3 1502 aaKnown RBP29.68■■■□□ 2.34
EXD3-202ENST00000460390 AKNAQ7Z591 1439 aa29.67■■■□□ 2.34
EXD3-202ENST00000460390 ARHGEF40Q8TER5 1519 aa29.67■■■□□ 2.34
EXD3-202ENST00000460390 RICTORQ6R327 1708 aa29.65■■■□□ 2.34
EXD3-202ENST00000460390 MADDQ8WXG6 1647 aa29.63■■■□□ 2.33
EXD3-202ENST00000460390 CFDP1Q9UEE9 299 aaPredicted RBP29.61■■■□□ 2.33
EXD3-202ENST00000460390 ZNF777Q9ULD5 760 aaPredicted RBP29.54■■■□□ 2.32
EXD3-202ENST00000460390 ZMYM4Q5VZL5 1548 aa29.54■■■□□ 2.32
EXD3-202ENST00000460390 RIMS1Q86UR5 1692 aaKnown RBP29.54■■■□□ 2.32
EXD3-202ENST00000460390 POGZQ7Z3K3 1410 aa29.53■■■□□ 2.32
EXD3-202ENST00000460390 SCAPERQ9BY12 1400 aa29.53■■■□□ 2.32
EXD3-202ENST00000460390 ZFYVE16Q7Z3T8 1539 aa29.53■■■□□ 2.32
EXD3-202ENST00000460390 SAMD9LQ8IVG5 1584 aa29.52■■■□□ 2.32
EXD3-202ENST00000460390 ABCC1P33527 1531 aa29.51■■■□□ 2.31
EXD3-202ENST00000460390 PLEKHH2Q8IVE3 1493 aa29.51■■■□□ 2.31
EXD3-202ENST00000460390 MYOM3Q5VTT5 1437 aa29.5■■■□□ 2.31
EXD3-202ENST00000460390 MAGI2Q86UL8 1455 aa29.47■■■□□ 2.31
EXD3-202ENST00000460390 MIA2Q96PC5 1412 aa29.46■■■□□ 2.31
EXD3-202ENST00000460390 KIAA1107Q9UPP5 1409 aa29.44■■■□□ 2.3
EXD3-202ENST00000460390 ZNF518AQ6AHZ1 1483 aa29.44■■■□□ 2.3
EXD3-202ENST00000460390 SYCP2Q9BX26 1530 aa29.43■■■□□ 2.3
EXD3-202ENST00000460390 LMTK3Q96Q04 1460 aa29.43■■■□□ 2.3
EXD3-202ENST00000460390 YEATS2Q9ULM3 1422 aa29.42■■■□□ 2.3
EXD3-202ENST00000460390 CAMSAP2Q08AD1 1489 aa29.41■■■□□ 2.3
EXD3-202ENST00000460390 ARHGEF12Q9NZN5 1544 aa29.41■■■□□ 2.3
EXD3-202ENST00000460390 PPARGC1BQ86YN6 1023 aaKnown RBP29.4■■■□□ 2.3
EXD3-202ENST00000460390 ZNF644Q9H582 1327 aaPredicted RBP29.39■■■□□ 2.29
EXD3-202ENST00000460390 PLPPR3Q6T4P5 718 aa29.38■■■□□ 2.29
EXD3-202ENST00000460390 FER1L4A9Z1Z3 1794 aa29.38■■■□□ 2.29
EXD3-202ENST00000460390 HNRNPMP52272 730 aaKnown RBP eCLIP29.37■■■□□ 2.29
EXD3-202ENST00000460390 FBXO41Q8TF61 875 aa29.37■■■□□ 2.29
EXD3-202ENST00000460390 KDM5CP41229 1560 aa29.36■■■□□ 2.29
EXD3-202ENST00000460390 FGD6Q6ZV73 1430 aa29.36■■■□□ 2.29
EXD3-202ENST00000460390 SIGLEC1Q9BZZ2 1709 aa29.36■■■□□ 2.29
EXD3-202ENST00000460390 TRAPPC8Q9Y2L5 1435 aa29.36■■■□□ 2.29
EXD3-202ENST00000460390 PTPN23Q9H3S7 1636 aa29.35■■■□□ 2.29
EXD3-202ENST00000460390 AFAP1Q8N556 730 aa29.35■■■□□ 2.29
EXD3-202ENST00000460390 MLECQ14165 292 aa29.34■■■□□ 2.29
EXD3-202ENST00000460390 RSPH4AQ5TD94 716 aa29.31■■■□□ 2.28
EXD3-202ENST00000460390 MBD5Q9P267 1494 aa29.3■■■□□ 2.28
EXD3-202ENST00000460390 C9orf84Q5VXU9 1444 aa29.3■■■□□ 2.28
EXD3-202ENST00000460390 MYT1LQ9UL68 1186 aa29.29■■■□□ 2.28
EXD3-202ENST00000460390 ARHGEF5Q12774 1597 aa29.29■■■□□ 2.28
EXD3-202ENST00000460390 ATP10AO60312 1499 aa29.29■■■□□ 2.28
EXD3-202ENST00000460390 TCOF1Q13428 1488 aaKnown RBP29.27■■■□□ 2.28
EXD3-202ENST00000460390 CCDC141Q6ZP82 1450 aa29.27■■■□□ 2.28
EXD3-202ENST00000460390 MLH3Q9UHC1 1453 aa29.27■■■□□ 2.28
EXD3-202ENST00000460390 SPAG9O60271 1321 aaKnown RBP29.25■■■□□ 2.27
EXD3-202ENST00000460390 HSPA2P54652 639 aa29.23■■■□□ 2.27
EXD3-202ENST00000460390 KIDINS220Q9ULH0 1771 aa29.22■■■□□ 2.27
EXD3-202ENST00000460390 INO80Q9ULG1 1556 aaPredicted RBP29.2■■■□□ 2.26
EXD3-202ENST00000460390 ATP7AQ04656 1500 aa29.2■■■□□ 2.26
EXD3-202ENST00000460390 TSPY4P0CV99 314 aa29.2■■■□□ 2.26
EXD3-202ENST00000460390 TSPY10P0CW01 314 aa29.2■■■□□ 2.26
EXD3-202ENST00000460390 FAM50AQ14320 339 aaKnown RBP29.19■■■□□ 2.26
EXD3-202ENST00000460390 PREX1Q8TCU6 1659 aa29.17■■■□□ 2.26
EXD3-202ENST00000460390 RTEL1-TNFRSF6BF6WH68 1400 aa29.16■■■□□ 2.26
EXD3-202ENST00000460390 DNMT1P26358 1616 aaKnown RBP29.16■■■□□ 2.26
EXD3-202ENST00000460390 ABCA6Q8N139 1617 aa29.16■■■□□ 2.26
EXD3-202ENST00000460390 DIP2CQ9Y2E4 1556 aa29.15■■■□□ 2.26
EXD3-202ENST00000460390 CROCC2H7BZ55 1655 aa29.14■■■□□ 2.26
EXD3-202ENST00000460390 MAST1Q9Y2H9 1570 aa29.12■■■□□ 2.25
EXD3-202ENST00000460390 DAPK1P53355 1430 aa29.12■■■□□ 2.25
EXD3-202ENST00000460390 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.1■■■□□ 2.253e-11■■■■■ 37.1
EXD3-202ENST00000460390 SHANK2Q9UPX8 1470 aa29.1■■■□□ 2.25
EXD3-202ENST00000460390 ABCC5O15440 1437 aa29.1■■■□□ 2.25
EXD3-202ENST00000460390 RRBP1Q9P2E9 1410 aaKnown RBP29.1■■■□□ 2.25
EXD3-202ENST00000460390 ADGBQ8N7X0 1667 aa29.1■■■□□ 2.25
EXD3-202ENST00000460390 REREQ9P2R6 1566 aa29.09■■■□□ 2.25
EXD3-202ENST00000460390 CEBPAP49715 358 aaPredicted RBP29.03■■■□□ 2.24
EXD3-202ENST00000460390 ESF1Q9H501 851 aaKnown RBP29.03■■■□□ 2.24
EXD3-202ENST00000460390 UHRF1BP1Q6BDS2 1440 aa29.03■■■□□ 2.24
EXD3-202ENST00000460390 A2MP01023 1474 aa29.02■■■□□ 2.24
EXD3-202ENST00000460390 PLXNC1O60486 1568 aa29.02■■■□□ 2.24
EXD3-202ENST00000460390 AGLP35573 1532 aa28.98■■■□□ 2.23
EXD3-202ENST00000460390 CERKQ8TCT0 537 aa28.97■■■□□ 2.23
EXD3-202ENST00000460390 SETD1BQ9UPS6 1966 aaKnown RBP28.96■■■□□ 2.23
EXD3-202ENST00000460390 C3P01024 1663 aa28.96■■■□□ 2.23
EXD3-202ENST00000460390 ANKRD30AQ9BXX3 1397 aa28.96■■■□□ 2.23
EXD3-202ENST00000460390 CHIC2Q9UKJ5 165 aa28.95■■■□□ 2.23
EXD3-202ENST00000460390 DHX29Q7Z478 1369 aaKnown RBP28.95■■■□□ 2.22
EXD3-202ENST00000460390 DMRT2Q9Y5R5 561 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms